Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F50 I1 R1	163	55.0	1534755	98.6%	1513268	150.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	671,974	G→A	D71D (GAC→GAT)	lptE ←	LPS assembly OM complex LptDE, lipoprotein component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	671,974	0	G	A	100.0%	231.8 / NA	59	D71D (GAC→GAT)	lptE	LPS assembly OM complex LptDE, lipoprotein component
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (32/27); total (32/27)

TGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACGTCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTATCACG  >  NC_000913/671826‑672117

tGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATc                                                                                                                                               >  1:308640/1‑151 (MQ=255)

          cGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTg                                                                                                                                     <  1:369828/151‑1 (MQ=255)

                       cGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCa                                                                                                                         >  2:278411/1‑150 (MQ=255)

                        ggCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCa                                                                                                                         >  1:719582/1‑149 (MQ=255)

                         gCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGc                                                                                                                      >  1:761658/1‑151 (MQ=255)

                            ggggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAAc                                                                                                                   >  2:515315/1‑151 (MQ=255)

                             gggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACt                                                                                                                  <  2:446422/151‑1 (MQ=255)

                             gggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACt                                                                                                                  >  1:402956/1‑151 (MQ=255)

                              ggATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTc                                                                                                                 <  1:559832/151‑1 (MQ=255)

                                  gaaCGCGGTCGCGTTAACCGTCATGATCATCTGATGATCTGCTGTTTGACCGTTACGGAGTACCGATGCGTGATCTTTAGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCGTACGCGTGGTTTCTTTATCGAGCAACTCGaca                                                                                                             <  2:731816/150‑1 (MQ=255)

                                    acacGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACAcc                                                                                                           >  2:380527/1‑151 (MQ=255)

                                    acacGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACAcc                                                                                                           >  1:485529/1‑151 (MQ=255)

                                      acGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTgg                                                                                                                                    <  1:335684/124‑1 (MQ=255)

                                      acGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTgg                                                                                                                                    >  2:335670/1‑124 (MQ=255)

                                           cGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAg                                                                                                     <  2:274330/150‑1 (MQ=255)

                                            gCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGAc                                                                                                   <  1:399800/151‑1 (MQ=255)

                                                tAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTa                                                                                                >  1:110294/1‑150 (MQ=255)

                                                 aaCCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAAc                                                                                              >  2:46335/1‑151 (MQ=255)

                                                    cGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTgg                                                                                           >  1:322948/1‑151 (MQ=255)

                                                     gTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGt                                                                                          >  1:131111/1‑151 (MQ=255)

                                                      tCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGtt                                                                                         >  1:150625/1‑151 (MQ=255)

                                                                  gATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTAcgcaccg                                                                                 <  2:218497/147‑1 (MQ=255)

                                                                     aCTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGc                                                                           <  1:135398/150‑1 (MQ=255)

                                                                     aCTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCt                                                                          >  1:596565/1‑151 (MQ=255)

                                                                       tctGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCtt                                                                         >  2:374563/1‑150 (MQ=255)

                                                                         tgctgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAAt                                                                      >  1:113797/1‑151 (MQ=255)

                                                                          gctgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAAt                                                                      <  1:420105/150‑1 (MQ=255)

                                                                           ctgTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATgg                                                                    >  2:181052/1‑151 (MQ=255)

                                                                             gTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGcc                                                                  >  2:471053/1‑151 (MQ=255)

                                                                             gTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGcc                                                                  <  2:71157/151‑1 (MQ=255)

                                                                                       tACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGAt                                                         <  1:385720/150‑1 (MQ=255)

                                                                                        aCGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCg                                                       <  2:573851/151‑1 (MQ=255)

                                                                                         cGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGc                                                      >  1:625886/1‑151 (MQ=255)

                                                                                          ggAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGcc                                                     >  1:186453/1‑151 (MQ=255)

                                                                                          ggAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGcc                                                     <  1:616171/151‑1 (MQ=255)

                                                                                          ggAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGcc                                                     >  1:741843/1‑151 (MQ=255)

                                                                                               aCCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGt                                                <  2:346818/151‑1 (MQ=255)

                                                                                               aCCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGt                                                <  1:211006/151‑1 (MQ=255)

                                                                                                   aTGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGTATCGCCTGAGTCCAg                                            <  1:464829/151‑1 (MQ=255)

                                                                                                    tGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAgg                                           >  2:563335/1‑151 (MQ=255)

                                                                                                     gCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGa                                          <  2:612132/151‑1 (MQ=255)

                                                                                                      cGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGAt                                         <  2:277176/151‑1 (MQ=255)

                                                                                                               tCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCtt                                >  2:284903/1‑151 (MQ=255)

                                                                                                                cgcgATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCtt                                <  1:380548/150‑1 (MQ=255)

                                                                                                                  cgATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCAt                             >  1:365860/1‑151 (MQ=255)

                                                                                                                   gATGCTCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCAt                             >  1:521165/1‑150 (MQ=255)

                                                                                                                        tCACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTgg                        >  1:517081/1‑150 (MQ=255)

                                                                                                                         cACTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTgga                       >  1:259971/1‑150 (MQ=255)

                                                                                                                          aCTTTACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTggaag                     <  1:474770/151‑1 (MQ=255)

                                                                                                                            tttACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTggaagg                    >  1:635494/1‑150 (MQ=255)

                                                                                                                              tACCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAAc                 >  1:234940/1‑151 (MQ=255)

                                                                                                                               aCCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAAcc                <  1:225241/151‑1 (MQ=255)

                                                                                                                               aCCCAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAAcc                <  1:663085/151‑1 (MQ=255)

                                                                                                                                 ccAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTg              <  1:351822/151‑1 (MQ=255)

                                                                                                                                  cAAACGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAATGAACCtac             <  2:141828/151‑3 (MQ=255)

                                                                                                                                   aaaCGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCg            <  2:277566/151‑1 (MQ=255)

                                                                                                                                   aaaCGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCg            <  2:191047/151‑1 (MQ=255)

                                                                                                                                   aaaCGCAAGGATGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCg            >  2:617964/1‑151 (MQ=255)

                                                                                                                                             aTGGAACATCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTATCACg  >  1:369948/1‑151 (MQ=255)

TGGCGCTAATCGGGTAGATATCACGGCCGGGGATCAACACGGTCGCATTAACCGTCATGATCATCTGATACTCTGCTGTTTGACCGTTACGGAATACCGATGCGGTATCTTTCGCGATGCTCACTTTACCCAAACGCAAGGATGGAACGTCCTTACGCGTGGTTTCTTTATCAAGCAACTCGACACCATTCAGACGTAACTGGTTACGCACCGCACGGCTTAATGGCCCGTTCGGATCGCCTGAGTCCAGGATCATGACCTTCATAGTGGAAGGAACCTGCGTGGTATCACG  >  NC_000913/671826‑672117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A