Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,130,545 G→A R112C (CGC→TGC)  wcaD ← putative colanic acid polymerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,130,5450GA100.0% 289.3 / NA 72R112C (CGC→TGC) wcaDputative colanic acid polymerase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (31/41);  total (31/41)

TTCAGCACATAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCG  >  NC_000913/2130397‑2130691
                                                                                                                                                    |                                                                                                                                                  
ttCAGCACATAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAAt                                                                                                                                                  >  1:720944/1‑151 (MQ=255)
  cAGCACATAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATgg                                                                                                                                                >  2:630055/1‑151 (MQ=255)
  cAGCACATAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATg                                                                                                                                                 <  2:1039599/150‑1 (MQ=255)
   aGCACATAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGt                                                                                                                                               >  2:767744/1‑151 (MQ=255)
        aTAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTtgtgt                                                                                                                                          >  1:805000/1‑151 (MQ=255)
         tAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTtgtgtg                                                                                                                                         >  1:940768/1‑151 (MQ=255)
          aGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTgg                                                                                                                                        <  1:899360/151‑1 (MQ=255)
           gCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGc                                                                                                                                       <  2:19188/151‑1 (MQ=255)
              gTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGaa                                                                                                                                    <  2:966414/151‑1 (MQ=255)
              gTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGaa                                                                                                                                    <  1:486515/151‑1 (MQ=255)
                 gCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAAtt                                                                                                                                 <  2:926444/151‑1 (MQ=255)
                    gTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGAGTGGCGAAATTg                                                                                                                                <  1:809792/149‑1 (MQ=255)
                      aaaTCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGtttt                                                                                                                            >  2:22461/1‑151 (MQ=255)
                      aaaTCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGtttt                                                                                                                            <  1:325015/151‑1 (MQ=255)
                      aaaTCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGtttt                                                                                                                            <  2:489112/151‑1 (MQ=255)
                      aaaTCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGtttt                                                                                                                            >  2:694881/1‑151 (MQ=255)
                          cAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTaaa                                                                                                                         >  2:317038/1‑150 (MQ=255)
                          cAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTaaa                                                                                                                         >  2:54133/1‑150 (MQ=255)
                           aGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAAc                                                                                                                       >  1:144039/1‑151 (MQ=255)
                             atatTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACg                                                                                                                      >  2:621195/1‑150 (MQ=255)
                             atatTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGa                                                                                                                     <  1:245621/151‑1 (MQ=255)
                                  tCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACt                                                                                                                >  1:601914/1‑151 (MQ=255)
                                   cGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACt                                                                                                                <  2:458265/150‑1 (MQ=255)
                                   cGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACt                                                                                                                <  1:82069/150‑1 (MQ=255)
                                     aaaTCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTcc                                                                                                              >  1:365027/1‑150 (MQ=255)
                                       aTCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCcac                                                                                                            >  1:264680/1‑150 (MQ=255)
                                        tCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCacac                                                                                                          >  1:346101/1‑151 (MQ=255)
                                           aCTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCAt                                                                                                       <  2:244820/151‑1 (MQ=255)
                                           aCTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCAt                                                                                                       >  1:802512/1‑151 (MQ=255)
                                           aCTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCAt                                                                                                       <  2:169569/151‑1 (MQ=255)
                                              ccATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGcc                                                                                                    <  1:970367/151‑1 (MQ=255)
                                               cATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGcc                                                                                                    >  2:1011765/1‑150 (MQ=255)
                                                ataataCTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCaa                                                                                                  <  2:740384/151‑1 (MQ=255)
                                                ataataCTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCa                                                                                                   >  2:841450/1‑150 (MQ=255)
                                                  aataCTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCaata                                                                                                <  2:752511/151‑1 (MQ=255)
                                                     aCTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATg                                                                                             <  1:376688/151‑1 (MQ=255)
                                                     aCTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATg                                                                                             <  2:37779/151‑1 (MQ=255)
                                                     aCTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATg                                                                                             <  2:741168/151‑1 (MQ=255)
                                                        gctgcCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGa                                                                                            <  1:846153/149‑1 (MQ=255)
                                                             cACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAat                                                                                     >  2:452337/1‑151 (MQ=255)
                                                                 ggTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAg                                                                                 <  1:546718/151‑1 (MQ=255)
                                                                   tGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGAc                                                                               >  2:402554/1‑151 (MQ=255)
                                                                      ggATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACaaa                                                                            <  1:907486/151‑1 (MQ=255)
                                                                        aTAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACa                                                                          <  2:139083/151‑1 (MQ=255)
                                                                        aTAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACa                                                                          <  2:195942/151‑1 (MQ=255)
                                                                               gtgCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGt                                                                   >  2:513865/1‑151 (MQ=255)
                                                                                 gCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGtt                                                                  <  2:1015164/150‑1 (MQ=255)
                                                                                 gCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTg                                                                 <  1:898276/151‑1 (MQ=255)
                                                                                   cATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGaa                                                               <  1:198209/151‑1 (MQ=255)
                                                                                        ccACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTg                                                            <  2:166863/149‑1 (MQ=255)
                                                                                        ccACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGa                                                           <  2:361984/150‑1 (MQ=255)
                                                                                        ccACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGAc                                                          <  2:952647/151‑1 (MQ=255)
                                                                                            cgccgcCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTAt                                                      >  1:333694/1‑151 (MQ=255)
                                                                                               cgccAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTa                                                   <  1:76518/151‑1 (MQ=255)
                                                                                                        caccaccaGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATcc                                          <  1:1026239/151‑1 (MQ=255)
                                                                                                               aGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACt                                   <  2:522180/151‑1 (MQ=255)
                                                                                                                gCCCGACCACCAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTg                                  <  1:699546/151‑1 (MQ=255)
                                                                                                                     accaccAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCaa                             <  1:521995/151‑1 (MQ=255)
                                                                                                                     accaccAGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCaa                             <  2:630438/151‑1 (MQ=255)
                                                                                                                          caGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAAc                           >  2:334492/1‑148 (MQ=255)
                                                                                                                          caGATAAAAGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGa                        <  1:276303/151‑1 (MQ=255)
                                                                                                                               aaaaGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGtt                   <  2:85230/151‑1 (MQ=255)
                                                                                                                                aaaGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGtt                   >  2:922360/1‑150 (MQ=255)
                                                                                                                                 aaGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTa                  >  2:134057/1‑150 (MQ=255)
                                                                                                                                 aaGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTa                  >  2:22276/1‑150 (MQ=255)
                                                                                                                                 aaGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTa                  >  1:880236/1‑150 (MQ=255)
                                                                                                                                  aGAAACGTAATATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTaaa                <  1:633200/151‑1 (MQ=255)
                                                                                                                                          aaTATCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTg         >  2:681537/1‑150 (MQ=255)
                                                                                                                                           atatCTTGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTg         >  1:202355/1‑149 (MQ=255)
                                                                                                                                                ttGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCcg  >  2:650258/1‑151 (MQ=255)
                                                                                                                                                ttGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCcg  >  1:234878/1‑151 (MQ=255)
                                                                                                                                                 tGCAATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCcg  <  1:767769/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TTCAGCACATAGCTGTTGCTGTAAATCAGATATTTCGAAATCGACTCCATAATACTGCTGCCACCGGTGAGGATAATTTGTGCCATCTCCACCGCCGCCAGCGCCACCACCAGCCCGACCACCAGATAAAAGAAACGTAATATCTTGCGATGGTTGTGTGGCGAAATTGTTTTAAAACGAATACTCCACACCATGCCAATAATGATCACAATATAGACAAACAGCATAGTTGAAGTGACGTATTTACTGGCATCCAGCGACTGACCAAACAGATAGTTAAACGCCGTGAGTCCCG  >  NC_000913/2130397‑2130691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A