Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,346,802 G→A A646A (GCG→GCA)  nrdA → ribonucleoside‑diphosphate reductase 1, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,346,8020GA100.0% 262.6 / NA 68A646A (GCG→GCA) nrdAribonucleoside‑diphosphate reductase 1, alpha subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (39/29);  total (39/29)

ACGACTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCGTCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCGATCTCTGCC  >  NC_000913/2346654‑2346949
                                                                                                                                                    |                                                                                                                                                   
aCGACTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATc                                                                                                                                                   >  2:1001763/1‑151 (MQ=255)
  gACTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGa                                                                                                                                                 <  2:748272/151‑1 (MQ=255)
   aCTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGaa                                                                                                                                                <  1:271867/151‑1 (MQ=255)
   aCTGAGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGa                                                                                                                                                 >  2:1025318/1‑150 (MQ=255)
    cTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGaa                                                                                                                                                >  2:271857/1‑150 (MQ=255)
      gggAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGaa                                                                                                                                                >  1:44876/1‑148 (MQ=255)
       ggAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGAc                                                                                                                                            >  2:773282/1‑151 (MQ=255)
          aGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGt                                                                                                                                         >  2:890140/1‑151 (MQ=255)
               tGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTAtttt                                                                                                                                    >  2:160292/1‑151 (MQ=255)
                gCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTg                                                                                                                                   <  1:48461/151‑1 (MQ=255)
                 cGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTgc                                                                                                                                  <  1:222617/151‑1 (MQ=255)
                    gAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGcc                                                                                                                               >  2:588294/1‑151 (MQ=255)
                         aatcaaAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAggt                                                                                                                           <  1:702114/150‑1 (MQ=255)
                           tcaaAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAggtgg                                                                                                                         <  1:436987/150‑1 (MQ=255)
                            caaAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGGTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGgtggtg                                                                                                                       <  1:103472/151‑1 (MQ=255)
                             aaaaCGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGgtggtg                                                                                                                       >  1:699717/1‑150 (MQ=255)
                              aaaCGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGcc                                                                                                                     <  1:874793/151‑1 (MQ=255)
                                    aCGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACt                                                                                                                >  1:544874/1‑150 (MQ=255)
                                      ggTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACg                                                                                                             <  2:941696/151‑1 (MQ=255)
                                                   ccACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCacg                                                                                                 >  1:793415/1‑150 (MQ=255)
                                                     aCGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCacgacg                                                                                              >  2:767048/1‑151 (MQ=255)
                                                     aCGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCacgacg                                                                                              >  2:25949/1‑151 (MQ=255)
                                                     aCGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCacgacg                                                                                              >  2:353187/1‑151 (MQ=255)
                                                        cTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCt                                                                                           >  2:172377/1‑151 (MQ=255)
                                                              gCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAgc                                                                                     >  2:555669/1‑151 (MQ=255)
                                                               ctctGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAgct                                                                                    >  1:13346/1‑151 (MQ=255)
                                                                 ctGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAgctgc                                                                                  >  2:14890/1‑151 (MQ=255)
                                                                  tGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAgctgct                                                                                 >  2:945891/1‑151 (MQ=255)
                                                                   gATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAgctg                                                                                   <  1:517012/148‑1 (MQ=255)
                                                                      gCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTgg                                                                             >  2:717205/1‑151 (MQ=255)
                                                                           ccGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAAt                                                                        >  1:795489/1‑151 (MQ=255)
                                                                           ccGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAAt                                                                        >  1:469506/1‑151 (MQ=255)
                                                                           ccGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAAt                                                                        <  2:113368/151‑1 (MQ=255)
                                                                            cGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATg                                                                       >  2:1006474/1‑151 (MQ=255)
                                                                             gagaCTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGc                                                                      >  2:692772/1‑151 (MQ=255)
                                                                                aCTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCgg                                                                   <  2:9379/151‑1 (MQ=255)
                                                                                   tcttcGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGt                                                                 >  2:596879/1‑150 (MQ=255)
                                                                                     ttcGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAAc                                                              >  2:11859/1‑151 (MQ=255)
                                                                                           gATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGt                                                        >  2:981552/1‑151 (MQ=255)
                                                                                             tctcTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGtt                                                       >  1:877773/1‑150 (MQ=255)
                                                                                              ctctAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTAt                                                     >  1:315174/1‑151 (MQ=255)
                                                                                              ctctAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTAt                                                     >  1:915601/1‑151 (MQ=255)
                                                                                                ctAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGt                                                        <  2:418568/146‑1 (MQ=255)
                                                                                                ctAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCt                                                   >  1:631821/1‑151 (MQ=255)
                                                                                                   aCGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGc                                                 >  1:321070/1‑150 (MQ=255)
                                                                                                    cGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCa                                                >  1:123163/1‑150 (MQ=255)
                                                                                                        aCTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACtgg                                           >  2:257751/1‑151 (MQ=255)
                                                                                                        aCTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACtgg                                           <  2:761690/151‑1 (MQ=255)
                                                                                                           aaCGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACtggtgg                                        <  2:609380/151‑1 (MQ=255)
                                                                                                              ggTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTa                                     <  2:957201/151‑1 (MQ=255)
                                                                                                                 aTTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATc                                   <  2:366615/150‑1 (MQ=255)
                                                                                                                   tGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATc                                   <  2:206619/148‑1 (MQ=255)
                                                                                                                   tGAACCGCCGCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCAt                                 >  1:68301/1‑150 (MQ=255)
                                                                                                                       ccgccgCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGa                            <  1:83319/151‑1 (MQ=255)
                                                                                                                       ccgccgCGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGa                            <  1:318466/151‑1 (MQ=255)
                                                                                                                         gccgcGCGGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGaaa                          <  1:1001804/151‑1 (MQ=255)
                                                                                                                           cgcgcgGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAAtt                        >  2:295122/1‑151 (MQ=255)
                                                                                                                           cgcgcgGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAAtt                        <  2:87192/151‑1 (MQ=255)
                                                                                                                            gcgcgGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAAttt                       <  1:588311/151‑1 (MQ=255)
                                                                                                                             cgcgGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAAttt                       >  2:454047/1‑150 (MQ=255)
                                                                                                                             cgcgGTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTa                      <  2:267438/151‑1 (MQ=255)
                                                                                                                                ggTTACGTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCg                   <  1:949835/151‑1 (MQ=255)
                                                                                                                                      gTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGt             <  1:433105/151‑1 (MQ=255)
                                                                                                                                      gTCAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGt             >  2:661766/1‑151 (MQ=255)
                                                                                                                                        cAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTc            <  1:1061395/150‑1 (MQ=255)
                                                                                                                                        cAGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCg           <  2:381036/151‑1 (MQ=255)
                                                                                                                                         aGCATCAAAGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCGa          <  2:550283/151‑1 (MQ=255)
                                                                                                                                                 aGCATCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCGATCTCTGcc  >  1:927331/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ACGACTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCGTCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCGATCTCTGCC  >  NC_000913/2346654‑2346949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A