Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
554,198 |
A→G |
R80R (CGT→CGC) |
ppiB ← |
peptidyl‑prolyl cis‑trans isomerase B (rotamase B) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 554,198 | 0 | A | G | 99.2%
| 485.1
/ ‑4.5
| 133 | R80R (CGT→CGC) | ppiB | peptidyl‑prolyl cis‑trans isomerase B (rotamase B) |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (58/74); total (59/74) |
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.37e-01 |
Only 100 of 133 total aligned reads displayed.
GCCGTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCG > NC_000913/554051‑554344
|
gCCGTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCgg < 1:153389/151‑1 (MQ=255)
cGTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGt > 3:165143/1‑151 (MQ=255)
cGTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGt > 1:360783/1‑151 (MQ=255)
cGTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGt < 1:165129/151‑1 (MQ=255)
gTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTa < 4:1026341/151‑1 (MQ=255)
tCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTAt > 2:479902/1‑151 (MQ=255)
cAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTAtt > 2:1567631/1‑151 (MQ=255)
aaCCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCGGAGTACGTGCCATTGCCAGCGTACCGCGGGTAttt < 1:446625/151‑1 (MQ=255)
ccACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTAttttt < 4:1298764/151‑1 (MQ=255)
ccACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTAttttt > 1:329237/1‑151 (MQ=255)
ccACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTAttttt < 4:792468/151‑1 (MQ=255)
cACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTc < 1:58188/151‑1 (MQ=255)
aCTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCa < 4:1369905/151‑1 (MQ=255)
aCTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCa < 1:467998/151‑1 (MQ=255)
aGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCg < 2:402549/151‑1 (MQ=255)
cAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgtt < 4:361432/151‑1 (MQ=255)
cAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgtt < 2:480490/151‑1 (MQ=255)
cAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgtt < 1:227498/151‑1 (MQ=255)
aaaCACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgttg < 4:24803/151‑1 (MQ=255)
aaaCACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgttg < 1:335962/151‑1 (MQ=255)
aaaCACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgttg < 2:854228/151‑1 (MQ=255)
aaCACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCgttgt > 4:549627/1‑151 (MQ=255)
gCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCt > 4:901848/1‑151 (MQ=255)
gTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCg > 3:4292/1‑151 (MQ=255)
tAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGt > 1:145111/1‑151 (MQ=255)
aGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGtt < 1:40609/151‑1 (MQ=255)
cccAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGttttt > 3:104789/1‑151 (MQ=255)
ccAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTg < 4:1095256/151‑1 (MQ=255)
aaCCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGAt > 3:332721/1‑151 (MQ=255)
aCCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATc > 1:281909/1‑151 (MQ=255)
cTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCgg > 3:142334/1‑151 (MQ=255)
cAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCt > 2:735697/1‑151 (MQ=255)
aGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCtt < 4:477727/151‑1 (MQ=255)
ggCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCttt < 4:367474/151‑1 (MQ=255)
ggCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCttt < 2:516804/151‑1 (MQ=255)
cTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGGTGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTtg > 1:339605/1‑150 (MQ=255)
tCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTtggtg < 4:1300142/150‑1 (MQ=255)
tCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTtggtg < 3:174516/150‑1 (MQ=255)
gCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCt > 2:1622920/1‑151 (MQ=255)
cAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCttt < 4:346309/151‑1 (MQ=255)
cAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCttt > 2:860201/1‑151 (MQ=255)
gagaAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCttttt < 1:474566/151‑1 (MQ=255)
gaAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGt > 2:1565869/1‑151 (MQ=255)
gaAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGt < 4:1184025/151‑1 (MQ=255)
aGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGttt > 4:241455/1‑151 (MQ=255)
aGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGttt < 3:196375/151‑1 (MQ=255)
gTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTc < 1:388690/151‑1 (MQ=255)
tCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCAt > 4:499481/1‑151 (MQ=255)
cAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCAt < 2:1027313/150‑1 (MQ=255)
cAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATg < 2:1027277/151‑1 (MQ=255)
aGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGc > 4:14141/1‑151 (MQ=255)
gAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGccc > 4:862686/1‑151 (MQ=255)
gTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCa < 2:498781/151‑1 (MQ=255)
tATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCaa > 4:970389/1‑150 (MQ=255)
aTCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCAGTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCaaa < 4:57785/150‑1 (MQ=255)
tCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAc > 2:81448/1‑151 (MQ=255)
tCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAc > 3:215309/1‑151 (MQ=255)
cAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAcc > 4:1436723/1‑151 (MQ=255)
cAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAcc < 4:851655/151‑1 (MQ=255)
cAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAcc < 4:732516/151‑1 (MQ=255)
cAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAcc < 3:360800/151‑1 (MQ=255)
cACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAAccgccg > 2:767969/1‑151 (MQ=255)
aCGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACcgccgc > 1:37953/1‑151 (MQ=255)
tgatgaAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCt < 2:1282844/150‑1 (MQ=255)
aagaaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATc > 4:267137/1‑150 (MQ=255)
aagaaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATc > 1:30649/1‑150 (MQ=255)
agaaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCAt < 2:406590/151‑1 (MQ=255)
agaaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCa > 2:360279/1‑150 (MQ=255)
gaaCTGTGCAGTTGCATAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATa < 4:1511151/151‑1 (MQ=255)
gaaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCAt > 3:273365/1‑150 (MQ=255)
gaaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATa < 3:381563/151‑1 (MQ=255)
aaCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATa > 4:1430670/1‑150 (MQ=255)
aCTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATaa > 4:1103070/1‑150 (MQ=255)
cTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATaa > 2:136536/1‑149 (MQ=255)
gtgCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAg < 3:145125/149‑1 (MQ=255)
gCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCg < 2:772921/150‑1 (MQ=255)
gCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGt < 2:1117183/151‑1 (MQ=255)
gCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATaa < 4:540532/151‑1 (MQ=255)
gCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATa > 4:1044829/1‑150 (MQ=255)
gCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATa < 1:271278/150‑1 (MQ=255)
cAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATaa > 2:1293908/1‑150 (MQ=255)
tgagTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGAATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAac > 2:377988/2‑150 (MQ=255)
agagTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAaca < 2:1286471/151‑1 (MQ=255)
agagTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAac > 2:775539/1‑150 (MQ=255)
agTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACg > 2:1450734/1‑151 (MQ=255)
tGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGt > 4:481732/1‑151 (MQ=255)
cGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTgg < 2:477872/151‑1 (MQ=255)
cGGAGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTgg < 4:1569577/151‑1 (MQ=255)
aGCCTGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGaaa < 4:132181/151‑1 (MQ=255)
tGAGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATgg > 4:1179446/1‑151 (MQ=255)
aGTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGgtg > 3:376815/1‑151 (MQ=255)
gTACGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGgtgt > 2:35980/1‑151 (MQ=255)
aCGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGtgttg < 4:1440971/151‑1 (MQ=255)
aCGTGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGtgttg < 4:1526093/151‑1 (MQ=255)
tGCCATTGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGtgttgtt < 1:372225/150‑1 (MQ=255)
tGCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTaaaa > 2:805634/1‑150 (MQ=255)
gCCAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAAc > 2:1453306/1‑151 (MQ=255)
ccAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAAcc > 4:1475192/1‑151 (MQ=255)
cAGCGTACCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCt > 2:34638/1‑151 (MQ=255)
aCCGCGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTcgca < 2:900677/150‑2 (MQ=255)
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GCCGTCAACCACTTCAGCAAACACGCAGTAGCCCCAACCTTGCAGGCTTTCGCCAGAGAAGTTCAGGAAGTCGTTATCAACCACGTTGATGAAGAACTGTGCAGTTGCAGAGTGCGGAGCCTGAGTACGTGCCATTGCCAGCGTACCACGGGTATTTTTCAGGCCGTTGTTGGCTTCGTTTTTGATCGGTTCTTTGGTGGCTTTTTGTTTCATGCCCGGTTCAAAACCGCCGCCCTGAATCATAAAGCCGTTGATAACACGGTGGAAAATGGTGTTGTTGTAAAAACCTTCGCG > NC_000913/554051‑554344
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
