Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,228,980 |
C→T |
R56C (CGC→TGC) |
ycgN → |
UPF0153 family cysteine cluster protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,228,980 | 0 | C | T | 99.1%
| 433.9
/ NA
| 112 | R56C (CGC→TGC) | ycgN | UPF0153 family cysteine cluster protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (58/53); total (59/53) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 112 total aligned reads displayed.
GAGCGATGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTCGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGAAGG > NC_000913/1228832‑1229125
|
gaGCGATGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGAGGCGGAATGGGAGTCGTTGTGAGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTCGc > 4:532810/1‑151 (MQ=255)
aGCGATGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGcc > 4:1347407/1‑151 (MQ=255)
aTGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCt < 4:1319971/151‑1 (MQ=255)
tGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTc > 2:520274/1‑151 (MQ=255)
cTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAatat > 2:274235/1‑151 (MQ=255)
tttCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATAtt > 2:775542/1‑151 (MQ=255)
tttCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATAtt > 4:1561116/1‑151 (MQ=255)
ttCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATAtt < 4:1563434/150‑1 (MQ=255)
ggCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAAc > 4:1202803/1‑151 (MQ=255)
cAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCt < 4:104767/151‑1 (MQ=255)
aaGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTTAATATTAAAACCTGt < 2:1482988/151‑1 (MQ=255)
gTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCa < 4:1686395/151‑1 (MQ=255)
tAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCa > 4:610400/1‑150 (MQ=255)
aaaaCCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCaa < 4:816783/150‑1 (MQ=255)
aaaaCCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCaa < 2:902151/150‑1 (MQ=255)
aaaaCCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAAt > 2:147737/1‑151 (MQ=255)
aaaaCCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAAt < 2:1665435/151‑1 (MQ=255)
aaaCCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATg > 4:437251/1‑151 (MQ=255)
aCCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTc < 4:222176/151‑1 (MQ=255)
cccTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGAGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCg > 2:565492/1‑151 (MQ=255)
ccTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCgg < 2:775402/151‑1 (MQ=255)
cTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACCCCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTc < 3:29458/148‑1 (MQ=255)
tGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGa > 2:199972/1‑150 (MQ=255)
tGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGa > 1:424498/1‑150 (MQ=255)
ggACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAAc < 4:789183/151‑1 (MQ=255)
cGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTAc > 4:251633/1‑151 (MQ=255)
gAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACg > 2:828282/1‑151 (MQ=255)
gAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACg > 4:452800/1‑151 (MQ=255)
aTGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAc < 4:1596094/151‑1 (MQ=255)
aTGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAc < 4:1242978/151‑1 (MQ=255)
gAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAcg < 4:772272/150‑1 (MQ=255)
aGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAcgtc < 1:233670/151‑1 (MQ=255)
aGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAcgtc > 4:276537/1‑151 (MQ=255)
gCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAcgtcg < 4:256767/151‑1 (MQ=255)
gCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAAcgtcg > 1:415549/1‑151 (MQ=255)
aTGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGttt < 4:200302/151‑1 (MQ=255)
aTGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGttt > 4:793175/1‑151 (MQ=255)
tGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTc > 4:10/1‑151 (MQ=255)
gCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTc < 4:1028359/150‑1 (MQ=255)
gCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCg < 2:625505/151‑1 (MQ=255)
gCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCg < 3:459373/151‑1 (MQ=255)
ggAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAg < 1:309036/151‑1 (MQ=255)
gAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGt > 2:13296/1‑151 (MQ=255)
gAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAAc > 2:40118/1‑151 (MQ=255)
gTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGAc > 4:1686937/1‑151 (MQ=255)
ttGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACt > 4:136761/1‑151 (MQ=255)
tgtgtgATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTg > 4:518756/1‑151 (MQ=255)
gtgtgATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTg < 2:1587406/150‑1 (MQ=255)
gtgtgATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTg < 4:1629918/150‑1 (MQ=255)
tgtgATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGc > 2:757162/1‑150 (MQ=255)
gtgATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCat < 1:409472/151‑1 (MQ=255)
aTGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAGCCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaa < 1:353204/151‑1 (MQ=255)
ggTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaaat < 4:881017/151‑1 (MQ=255)
gTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaaatt < 2:819474/151‑1 (MQ=255)
gTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaaatt > 2:125867/1‑151 (MQ=255)
ttGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaaatt > 2:446853/1‑150 (MQ=255)
ttGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaaatt < 2:387846/150‑1 (MQ=255)
ttGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCattaaatt > 2:1010591/1‑150 (MQ=255)
ggTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAAccc > 3:399121/1‑151 (MQ=255)
tCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCg > 2:590079/1‑150 (MQ=255)
gtgtTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGa > 1:332933/1‑150 (MQ=255)
gtgtTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGa > 4:1417355/1‑150 (MQ=255)
tgtTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGaa < 3:129715/150‑1 (MQ=255)
gCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATc < 2:1375089/150‑1 (MQ=255)
ccTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCt > 4:1420085/1‑150 (MQ=255)
gCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCa < 2:827664/151‑1 (MQ=255)
gCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCa < 4:1232077/151‑1 (MQ=255)
aaCTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACAtt > 2:141146/1‑151 (MQ=255)
atggatgAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGaa < 4:1430210/150‑1 (MQ=255)
atggatgAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAAt < 3:424516/151‑1 (MQ=255)
atggatgAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAAt < 4:324322/151‑1 (MQ=255)
atggatgAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAAt > 2:60938/1‑151 (MQ=255)
gatgAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGc > 2:941401/1‑151 (MQ=255)
aaGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGcc < 4:66050/151‑1 (MQ=255)
aGACACCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGcc > 3:46555/1‑150 (MQ=255)
cacCGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATg > 4:153924/1‑151 (MQ=255)
ccGACGAAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGAc > 2:640137/1‑151 (MQ=255)
cgacgaAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGAcc > 3:85227/1‑151 (MQ=255)
gacgaAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCt < 2:792134/151‑1 (MQ=255)
gaAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCTATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTgcg < 2:516118/151‑1 (MQ=255)
gaAATCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTgcg > 4:797139/1‑151 (MQ=255)
aaTCTACTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCt < 4:1013215/151‑1 (MQ=255)
aCTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAATATTCGAATGGCTGCCAATGACCTGCGCTTATCg < 2:1216815/151‑1 (MQ=255)
aCTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCtt < 4:829377/147‑1 (MQ=255)
aCTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTa < 3:397846/148‑1 (MQ=255)
aCTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTAt < 4:1235889/149‑1 (MQ=255)
aCTTCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCg < 4:417732/151‑1 (MQ=255)
tCACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCg < 2:1201295/148‑1 (MQ=255)
cACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGttt < 4:1603170/150‑1 (MQ=255)
cACTAACGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATAACCTGCGCTTATCGTTTg < 1:182337/151‑1 (MQ=255)
cTAACGTCGACTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCt > 2:17692/1‑151 (MQ=255)
aaCGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCt < 4:447487/149‑1 (MQ=255)
aaCGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTgg < 4:1575573/151‑1 (MQ=255)
aaCGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTgg > 4:753311/1‑151 (MQ=255)
aaCGTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTgg > 2:63668/1‑151 (MQ=255)
aCGCCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGc > 2:263989/1‑151 (MQ=255)
gTCGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCgg > 4:44857/1‑151 (MQ=255)
cGCCTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGa > 4:484878/1‑150 (MQ=255)
cTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGAAgg > 4:1290892/1‑150 (MQ=255)
cTGTTGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGAAgg > 4:225001/1‑150 (MQ=255)
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GAGCGATGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTCGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGAAGG > NC_000913/1228832‑1229125
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
