Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,816,806 |
A→G |
R110R (CGT→CGC) |
chbG ← |
chito‑oligosaccharide deacetylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,816,806 | 0 | A | G | 99.0%
| 360.1
/ ‑5.2
| 95 | R110R (CGT→CGC) | chbG | chito‑oligosaccharide deacetylase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (46/48); total (47/48) |
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAA > NC_000913/1816658‑1816951
|
gCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCg < 4:654448/151‑1 (MQ=255)
aaCGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATact < 2:966970/151‑1 (MQ=255)
aCGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATactg > 2:11911/1‑151 (MQ=255)
cGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATactg > 1:476334/1‑150 (MQ=255)
gCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATactgac > 3:369998/1‑151 (MQ=255)
cATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATactgactg < 3:195984/151‑1 (MQ=255)
tCTGACGATCCGCCCGCAACGCAATGCCCTACTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGACCAAATAGCTCAATGAAGCGCAAATACtgactgac > 4:1543748/1‑151 (MQ=255)
tGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACa > 2:389658/1‑150 (MQ=255)
gACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACa < 4:4252/149‑1 (MQ=255)
aTCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTcc > 4:992181/1‑151 (MQ=255)
ccgcccgcAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTg < 4:454203/151‑1 (MQ=255)
cgcccgcAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTg > 4:278089/1‑150 (MQ=255)
cccgcAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGt < 2:883030/151‑1 (MQ=255)
ccgcAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTa < 2:574518/151‑1 (MQ=255)
gcaacgcaaTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAAt < 1:423108/151‑1 (MQ=255)
gcaacgcaaTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAAt > 2:504691/1‑151 (MQ=255)
aacgcaaTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAAttt < 2:849975/151‑1 (MQ=255)
aacgcaaTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAAttt > 1:295734/1‑151 (MQ=255)
cgcaaTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATttct > 2:1486146/1‑151 (MQ=255)
cgcaaTGCCCTGCTCTGCCGCAAACATGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATttct > 3:456285/1‑151 (MQ=255)
gcaaTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATttctt > 4:451859/1‑151 (MQ=255)
aTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTcc > 3:326730/1‑150 (MQ=255)
aTGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCa < 4:1431101/151‑1 (MQ=255)
ccTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCgg < 2:960775/151‑1 (MQ=255)
ccTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCgg < 4:768362/151‑1 (MQ=255)
gCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGt < 1:136700/149‑1 (MQ=255)
gCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGt < 2:939362/149‑1 (MQ=255)
gCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTaa < 1:401243/151‑1 (MQ=255)
tctGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGCTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTaa > 3:50130/1‑149 (MQ=255)
ctGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTaaa < 1:428570/149‑1 (MQ=255)
tGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGc > 2:96170/1‑150 (MQ=255)
gCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAg < 2:1331606/148‑1 (MQ=255)
gCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGc < 4:1554194/149‑1 (MQ=255)
gCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCCCCTGTGTAATTTCTTCCAGCGGTaaatc < 2:1207339/149‑3 (MQ=255)
ccGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtc > 4:40803/1‑151 (MQ=255)
ccGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtc > 2:1593108/1‑151 (MQ=255)
aaaCCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtcttct > 4:1021441/1‑151 (MQ=255)
aaaCCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtcttct < 2:1120981/151‑1 (MQ=255)
tGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGc > 2:1571120/1‑151 (MQ=255)
gCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTg < 4:1115163/148‑1 (MQ=255)
aacaaTCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCaa < 2:995463/150‑1 (MQ=255)
aacaaTCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAAc > 4:1366271/1‑151 (MQ=255)
aaTCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGc < 2:899514/151‑1 (MQ=255)
gggAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGa < 4:160636/151‑1 (MQ=255)
aaaTCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATcc > 1:455184/1‑150 (MQ=255)
aaTCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCAt > 4:856764/1‑151 (MQ=255)
aaTCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCAt < 4:518293/151‑1 (MQ=255)
gCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTcc > 4:86404/1‑151 (MQ=255)
gggAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTccc > 4:1455117/1‑150 (MQ=255)
gggAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCa < 2:1280856/151‑1 (MQ=255)
aaCATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGca < 2:880541/151‑1 (MQ=255)
aaCATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGc > 2:932928/1‑150 (MQ=255)
aCATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGcac < 4:416391/151‑1 (MQ=255)
atGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACAcc < 4:1030896/150‑1 (MQ=255)
gCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCAt < 2:1447357/150‑1 (MQ=255)
gCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATc > 4:628194/1‑151 (MQ=255)
cacaTGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATcg < 4:811584/151‑1 (MQ=255)
cacaTGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATcg > 4:1099786/1‑151 (MQ=255)
acaTGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGc > 3:232111/1‑116 (MQ=255)
acaTGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATcgc < 2:643635/151‑1 (MQ=255)
gatgatgGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCggg < 4:344621/150‑1 (MQ=255)
gatgatgGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGt < 4:934137/151‑1 (MQ=255)
gatgatgGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGt < 2:1235499/151‑1 (MQ=255)
atgatgGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGtt > 1:193587/1‑151 (MQ=255)
gatgGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTa < 1:266101/150‑1 (MQ=255)
tgGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAAcc > 2:736383/1‑151 (MQ=255)
ggCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAAcc < 4:73735/150‑1 (MQ=255)
gCTATCAAGATGCGTAGGGTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAAcccc > 2:1361731/1‑151 (MQ=255)
aTCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCgg < 2:285094/150‑1 (MQ=255)
aTCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCgg < 3:281106/150‑1 (MQ=255)
aTCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCgg < 4:1051525/150‑1 (MQ=255)
aTCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGc < 2:617978/151‑1 (MQ=255)
cAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCAt < 2:697673/151‑1 (MQ=255)
cAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCAt > 2:1206020/1‑151 (MQ=255)
aTGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCt > 2:232756/1‑151 (MQ=255)
aTGCGTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCt > 3:327901/1‑151 (MQ=255)
gTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCa < 4:175683/151‑1 (MQ=255)
gTAGGTTTGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCa < 3:74448/151‑1 (MQ=255)
ttGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCt > 2:839367/1‑151 (MQ=255)
ttGCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCt > 1:373446/1‑151 (MQ=255)
gCGTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCtt > 4:1560377/1‑150 (MQ=255)
gTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTAcc > 2:1158973/1‑151 (MQ=255)
gTCCAAATAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTAcc > 2:1382452/1‑151 (MQ=255)
gTCCAAATAGACCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGAAAAACATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTAcc > 1:357354/1‑151 (MQ=255)
aaTAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCAt > 2:634523/1‑149 (MQ=255)
aaTAGCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCAt > 1:31929/1‑149 (MQ=255)
gCTCAGGGAAACGCAGCTGCTGGGTGACAAGGTGATGAGTAATTTCTTCTAGCGGGAGAGCATCTTCTTCTAACAAAAAACAGATCCATTTTCCCAGCACACTATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAgca > 2:1539396/1‑147 (MQ=255)
gCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTa > 2:1333391/1‑149 (MQ=255)
gCTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAg < 3:337275/151‑1 (MQ=255)
cTCAATGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAgg > 1:25420/1‑151 (MQ=255)
aaTGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACa < 2:35200/151‑1 (MQ=255)
aaTGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACa < 4:87578/151‑1 (MQ=255)
aTGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACaa < 4:1518233/151‑1 (MQ=255)
tGAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACaa > 2:164126/1‑150 (MQ=255)
gAAGCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACaa > 2:1367681/1‑149 (MQ=255)
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GCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAA > NC_000913/1816658‑1816951
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
