Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,550,463 |
T→C |
D28G (GAC→GGC) |
yfeX ← |
porphyrinogen oxidase, cytoplasmic |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,550,463 | 0 | T | C | 100.0%
| 453.2
/ NA
| 117 | D28G (GAC→GGC) | yfeX | porphyrinogen oxidase, cytoplasmic |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (53/64); total (53/64) |
Only 100 of 117 total aligned reads displayed.
TCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTG > NC_000913/2550317‑2550607
|
tCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAAc > 4:905436/1‑151 (MQ=255)
cAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACt < 2:947372/151‑1 (MQ=255)
cttctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTcccc > 2:876426/1‑151 (MQ=255)
cttctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTcc < 4:903735/149‑1 (MQ=255)
ttctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCt > 1:345588/1‑151 (MQ=255)
ttctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCt > 2:575773/1‑151 (MQ=255)
tctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTcccc < 4:1119364/149‑1 (MQ=255)
gCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCtt < 2:256871/148‑1 (MQ=255)
gCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTc > 4:811425/1‑150 (MQ=255)
ccccAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCAc < 2:420091/151‑1 (MQ=255)
cccAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACg > 4:593657/1‑151 (MQ=255)
cccAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACg > 3:137700/1‑151 (MQ=255)
cgccgccgcTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGc < 2:803289/151‑1 (MQ=255)
tgccgcTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTc > 2:1568159/2‑151 (MQ=255)
ccgcTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGa < 1:306089/151‑1 (MQ=255)
cgcTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGAt > 3:357456/1‑151 (MQ=255)
gcTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATc > 4:246107/1‑151 (MQ=255)
gcTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATc > 2:1287117/1‑151 (MQ=255)
tCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATcc > 2:353926/1‑150 (MQ=255)
tCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATcc > 2:899043/1‑150 (MQ=255)
cAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCaa < 2:65623/151‑1 (MQ=255)
cAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCa < 1:41279/150‑1 (MQ=255)
agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATc < 2:829830/151‑1 (MQ=255)
gcgcgcCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATcg > 4:1422202/1‑151 (MQ=255)
gcgcgcCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATcg > 4:1316656/1‑151 (MQ=255)
gcgcgcCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATcg < 3:344641/151‑1 (MQ=255)
cgcCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATcgccg > 2:454956/1‑151 (MQ=255)
cgcCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATcgccg < 2:279007/151‑1 (MQ=255)
gcCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATcgccgc < 4:794580/151‑1 (MQ=255)
ccAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCcgcg < 2:1616558/151‑1 (MQ=255)
cAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCcgcgc < 2:605765/151‑1 (MQ=255)
aGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCcgcgc > 2:1425416/1‑150 (MQ=255)
tgttgtTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGc > 2:1355308/1‑150 (MQ=255)
ttgttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAAt > 1:139337/1‑151 (MQ=255)
ttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGtt > 2:897209/1‑151 (MQ=255)
tACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTc > 2:189487/1‑151 (MQ=255)
aCCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCt > 4:1515491/1‑151 (MQ=255)
aCCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCt < 2:307829/151‑1 (MQ=255)
cAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTgg > 3:430483/1‑151 (MQ=255)
cAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTgg < 2:285032/151‑1 (MQ=255)
aaaGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGc < 2:1239653/151‑1 (MQ=255)
aaaGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGc > 2:1516144/1‑151 (MQ=255)
aaGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGc > 2:121744/1‑150 (MQ=255)
aaGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGc > 4:382733/1‑150 (MQ=255)
ggCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCaaa < 2:172875/151‑1 (MQ=255)
ggCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCaaa < 1:366665/151‑1 (MQ=255)
ccGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCAct > 1:111306/1‑151 (MQ=255)
gCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCActct < 4:1633756/151‑1 (MQ=255)
cACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTg < 3:301792/151‑1 (MQ=255)
cACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGCTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTg < 4:383231/151‑1 (MQ=255)
ccAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGTGCGCCAACTTCCCCTGTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGac < 1:47512/151‑2 (MQ=255)
cAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAAc < 1:367384/151‑1 (MQ=255)
gcgcGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTgag < 2:1524638/150‑1 (MQ=255)
cgcgTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTgaga > 4:435423/1‑150 (MQ=255)
cgcgTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGAc > 4:1325552/1‑151 (MQ=255)
gTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACAtt > 2:1175051/1‑151 (MQ=255)
aaTTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTtcctc < 4:1089965/151‑1 (MQ=255)
tCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTg > 1:458644/1‑150 (MQ=255)
tCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTg > 4:203244/1‑150 (MQ=255)
cGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGa > 1:150004/1‑150 (MQ=255)
cGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGa < 2:1121839/150‑1 (MQ=255)
aaaaGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAaataat < 2:402001/151‑1 (MQ=255)
aaGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAaataataa < 2:904263/151‑1 (MQ=255)
aaGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAaataata > 4:1156425/1‑150 (MQ=255)
aGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAaataataat < 4:1105702/151‑1 (MQ=255)
aGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAaataataat < 2:1608512/151‑1 (MQ=255)
gTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATg < 1:113797/151‑1 (MQ=255)
gTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATg < 1:45424/151‑1 (MQ=255)
ttGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGc > 4:388552/1‑151 (MQ=255)
tGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGc < 2:825526/150‑1 (MQ=255)
gCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCa < 4:711449/151‑1 (MQ=255)
cAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACg < 1:450456/151‑1 (MQ=255)
aGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGc > 2:1619165/1‑151 (MQ=255)
aGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGc < 2:976963/151‑1 (MQ=255)
gTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCa < 4:67276/151‑1 (MQ=255)
gTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCa < 1:46517/151‑1 (MQ=255)
gTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATcc > 4:1671046/1‑151 (MQ=255)
gTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATc < 2:245719/150‑1 (MQ=255)
cGGCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGt < 4:1443429/151‑1 (MQ=255)
ggCAAATGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTg < 4:764570/151‑1 (MQ=255)
aaaTGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGc > 1:144318/1‑150 (MQ=255)
aaaTGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGc > 1:359892/1‑150 (MQ=255)
aaTGTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAt > 1:124989/1‑151 (MQ=255)
gTTTTACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttg < 4:1530022/150‑1 (MQ=255)
tttACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgtt < 3:214435/150‑1 (MQ=255)
tttACTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgtt < 3:445454/150‑1 (MQ=255)
aCTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAgc < 2:872046/151‑1 (MQ=255)
aCTGGCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAgc > 3:221747/1‑151 (MQ=255)
ggCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGTCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCt < 4:373725/151‑1 (MQ=255)
gCCGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTa < 4:576569/151‑1 (MQ=255)
ccGCACGCAGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAt > 2:1084719/1‑151 (MQ=255)
gcacgcaGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAttt < 2:1258617/151‑1 (MQ=255)
cacgcaGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 2:1524509/1‑151 (MQ=255)
cacgcaGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt < 4:816464/151‑1 (MQ=255)
cgcaGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTAc < 4:1356999/151‑1 (MQ=255)
gcaGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACg > 4:1543767/1‑151 (MQ=255)
caGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCTCGCAATCCGTGGCATTGTTGAGCGCTATTTTACgt < 2:457042/151‑1 (MQ=255)
aGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 4:550325/1‑151 (MQ=255)
aGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg < 1:330190/151‑1 (MQ=255)
aGGGCGCCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACgtg > 2:281658/1‑151 (MQ=255)
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TCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCTGAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTG > NC_000913/2550317‑2550607
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
