Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I3 R1
|
168 |
141.0 |
4346284 |
99.6% |
4328898 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,969,428 |
T→C |
A519A (GCA→GCG) |
tap ← |
methyl‑accepting protein IV |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,969,428 | 0 | T | C | 99.2%
| 441.0
/ NA
| 129 | A519A (GCA→GCG) | tap | methyl‑accepting protein IV |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (54/74); minor base G (0/1); total (54/75) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 |
Only 100 of 129 total aligned reads displayed.
CCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGACAGCCT > NC_000913/1969281‑1969573
|
ccgAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCt > 1:1330904/1‑151 (MQ=255)
gAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTAc > 1:872201/1‑151 (MQ=255)
gAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGACATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTAc > 2:578403/1‑151 (MQ=255)
aaaaTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACt > 1:1964682/1‑151 (MQ=255)
aaaaTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACt > 1:447977/1‑151 (MQ=255)
aaaTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACtt > 2:1665494/1‑151 (MQ=255)
aaTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTc < 2:2068960/151‑1 (MQ=255)
aaTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTc > 2:2112249/1‑151 (MQ=255)
aaTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTCGTAACTGCACCGACTCATGTCGCGCTACTTc < 2:1171699/151‑1 (MQ=255)
aTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTc > 2:2144193/1‑150 (MQ=255)
aTGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCa < 2:10287/151‑1 (MQ=255)
gcgcGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATg > 1:1314827/1‑151 (MQ=255)
cgcgTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGt > 1:784669/1‑151 (MQ=255)
gcgTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGtt < 2:1829001/151‑1 (MQ=255)
cgTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGttc < 1:697970/151‑1 (MQ=255)
cGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGttctt < 2:1582719/150‑1 (MQ=255)
ggAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGttcttc > 2:2042189/1‑150 (MQ=255)
ggAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCa < 1:2103901/151‑1 (MQ=255)
gAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCaa < 2:913496/151‑1 (MQ=255)
gAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCaa < 2:764074/151‑1 (MQ=255)
aaaGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAg < 1:2158662/151‑1 (MQ=255)
aaGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAgg < 1:1453883/151‑1 (MQ=255)
aaGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAgg > 1:1267444/1‑151 (MQ=255)
aGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAggg < 1:203550/151‑1 (MQ=255)
aGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAggg > 2:102111/1‑151 (MQ=255)
ccAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTaaa < 1:1540092/151‑1 (MQ=255)
aGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATa < 1:864060/151‑1 (MQ=255)
ggCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATAc < 2:475237/151‑1 (MQ=255)
gcgcTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATAcc < 2:1168851/151‑1 (MQ=255)
gcTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGc > 2:1801635/1‑151 (MQ=255)
ggTCATCTGTAAAAAAAAAGACTTTTGCCCACGGGGCAGAGATAAATTCATAGCCCCTTCTCAATCACTTAAGTATCCCCCTGCCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATTTTCTTCAAGGGTAAATACCGCcaca < 2:2087613/151‑1 (MQ=255)
cATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACAcgc > 2:1034976/1‑151 (MQ=255)
tCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACAcgcg > 1:1298584/1‑150 (MQ=255)
gTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGcgac < 2:1162985/149‑1 (MQ=255)
gTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGcga < 2:872545/148‑1 (MQ=255)
gTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGcga < 1:1682680/148‑1 (MQ=255)
aaCAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCACTCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGaa < 2:1232996/150‑1 (MQ=255)
aaCAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGaaa < 1:2118295/151‑1 (MQ=255)
aaCAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGaa > 1:648622/1‑150 (MQ=255)
cAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGa < 2:161119/151‑1 (MQ=255)
aaTAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGa < 2:1414869/150‑1 (MQ=255)
aaTAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGAt < 2:231381/151‑1 (MQ=255)
aTAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATg > 1:721480/1‑151 (MQ=255)
aaGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTc < 1:701323/151‑1 (MQ=255)
aaGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTc < 1:166606/151‑1 (MQ=255)
aGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCg > 1:2006897/1‑151 (MQ=255)
aGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCg < 2:841637/151‑1 (MQ=255)
cGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGcc > 2:262702/1‑151 (MQ=255)
gTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCt > 2:1993990/1‑151 (MQ=255)
ttGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTg < 2:1034193/150‑1 (MQ=255)
cccACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTc > 2:1020561/1‑151 (MQ=255)
caGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCa < 1:1216926/151‑1 (MQ=255)
gggCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgt < 2:2134465/151‑1 (MQ=255)
ggCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgtt > 1:505862/1‑151 (MQ=255)
ggCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACCTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgtt < 2:46433/151‑1 (MQ=255)
gCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttg > 2:224352/1‑151 (MQ=255)
agagATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttgt < 2:1659533/150‑1 (MQ=255)
gaTGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCg > 1:2010515/1‑151 (MQ=255)
tGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTcc < 1:1117875/148‑1 (MQ=255)
gAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTg < 1:910438/151‑1 (MQ=255)
gAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTg < 2:1528305/151‑1 (MQ=255)
aaGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGc < 1:1575077/151‑1 (MQ=255)
gTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCa < 1:1684234/151‑1 (MQ=255)
aTAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAcc < 1:1145069/150‑1 (MQ=255)
cgcCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCCCCGACTCATGTCGCGCTACTTCATTTTCTTAAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAccgc < 2:1263818/148‑1 (MQ=255)
cgcCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATTTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAccgcc < 1:1905438/149‑1 (MQ=255)
gcCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGct > 2:1157668/1‑151 (MQ=255)
tctcAATCCCTTCAGGATACCACTGGCGCATTTTGTAACTGCCCCGACTCATGTCGCGCTCCTTCATGTTCTTCAAGGGTAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGcttct < 1:854046/150‑1 (MQ=255)
ctcAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCttcttc > 2:1428740/1‑151 (MQ=255)
ctcAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCttcttc > 2:1151719/1‑151 (MQ=255)
ctcAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCttcttc > 2:1694173/1‑151 (MQ=255)
ctcAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCttcttc > 1:56353/1‑151 (MQ=255)
tcAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTtcttct > 1:806156/1‑151 (MQ=255)
cAATCCCTTCAGGATCCCCCTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTCCTTCATGTTCTTAAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGcttctt < 1:1151556/148‑1 (MQ=255)
aaTCCCTTCAGGATACCACGGGCGCAATTTGTAACTGCCCCGACTCATGTCGCGCTACTTCATGTTCTTAAAGGGTAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGcttc < 1:133487/145‑1 (MQ=255)
aaTCACTTCGGAATCCCACTGGCGCATTTTGTAACTGCACCGACTCATGTCGGGCTACTTCATGTTCTTCAAGGGTAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCttcttc < 1:369965/148‑1 (MQ=255)
aaTCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTAc > 2:1998618/1‑151 (MQ=255)
cACTTCAGGATACCCCTGGCGCATTTTGTAACTGCCCCGACTCATGTCGCGCTACTTCATTTTCTTCAAGGTTAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCa < 2:594855/150‑1 (MQ=255)
cAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAgg > 1:1882739/1‑151 (MQ=255)
aCCCCTGGCCAAATTTGTACCTGCACCGACCCATGTCGCGCTTCTCCATTTTCTTCAAGGGTAAAACCCGCCACCCGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGtt < 2:130818/149‑1 (MQ=255)
aCCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAGGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTct < 1:409413/151‑1 (MQ=255)
ccccTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTct < 1:1545784/147‑1 (MQ=255)
ccACTGGCGCAATTTGTAACTGCCCCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAccgcc < 2:870365/125‑1 (MQ=255)
ccACTGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAccgc > 1:870377/1‑124 (MQ=255)
tGGCGCAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTctgctg > 1:832525/1‑150 (MQ=255)
cgaaaTTTGTAACTGCCCCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGt < 1:1852543/147‑1 (MQ=255)
cAATTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCAc > 1:147548/1‑151 (MQ=255)
aTTTGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCt > 1:303159/1‑151 (MQ=255)
tttGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTg > 2:818738/1‑151 (MQ=255)
tGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGAt > 1:1525742/1‑151 (MQ=255)
tGTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGAt > 2:58986/1‑151 (MQ=255)
gTAACTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATc > 1:388195/1‑151 (MQ=255)
taccTGCACCGCCTCATGTCGCGCTACTTCATTTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGAt < 1:1147455/146‑1 (MQ=255)
aaCTGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATcc > 2:65985/1‑150 (MQ=255)
aaCAGCACCGACTCATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATcc > 1:1222674/1‑150 (MQ=255)
cATGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGACAGc > 2:1930647/1‑151 (MQ=255)
aTGTCGCGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGACAGcc > 2:1029554/1‑151 (MQ=255)
aTGCCGCGCTACTTCATGTTTTTAAAGGGAAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGa < 2:472223/146‑1 (MQ=255)
tGTCGCGCTACTTCATGTTCTTCAAGGGTAAATCCCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGACAGcc < 2:240384/150‑1 (MQ=255)
gTCGCGCTACTTCATTTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGACAGCCt < 1:1371803/150‑1 (MQ=255)
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CCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGCCGCTTCTTCTACCAGCGAGGCGTTCTGCTGAGTCACCTGATCCATCTGGCTGACAGCCT > NC_000913/1969281‑1969573
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
