Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I3 R1 168 141.0 4346284 99.6% 4328898 150.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,209,024 T→C L353P (CTG→CCG)  yehP → VMA domain putative YehL ATPase stimulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,209,0240TC100.0% 482.4 / NA 134L353P (CTG→CCG) yehPVMA domain putative YehL ATPase stimulator
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (61/73);  total (61/73)

Only 100 of 134 total aligned reads displayed.

CGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTT  >  NC_000913/2208878‑2209171
                                                                                                                                                  |                                                                                                                                                   
cGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGt                                                                                                                                                  <  1:639198/150‑1 (MQ=255)
  tGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTa                                                                                                                                                >  1:1357420/1‑150 (MQ=255)
   gAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTaa                                                                                                                                               <  1:756781/150‑1 (MQ=255)
      cGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTc                                                                                                                                           >  2:1795052/1‑151 (MQ=255)
               cGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGcaca                                                                                                                                   >  1:547193/1‑150 (MQ=255)
                 aaGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAAt                                                                                                                                >  2:125812/1‑151 (MQ=255)
                  aGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATa                                                                                                                               <  2:762971/151‑1 (MQ=255)
                   gggggTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCATAAAt                                                                                                                                >  1:461441/1‑149 (MQ=255)
                   gggggTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAg                                                                                                                              <  2:787667/151‑1 (MQ=255)
                    ggggTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAgc                                                                                                                             <  2:1568174/151‑1 (MQ=255)
                     gggTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAgcc                                                                                                                            <  2:1153124/151‑1 (MQ=255)
                     gggTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAgcc                                                                                                                            <  1:391008/151‑1 (MQ=255)
                       gTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAgccgc                                                                                                                          >  1:1203233/1‑151 (MQ=255)
                         tcatcatcaTTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAgccgcc                                                                                                                         >  1:807505/1‑150 (MQ=255)
                          catcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCAt                                                                                                                       >  2:1493042/1‑151 (MQ=255)
                           atcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATg                                                                                                                      >  2:153540/1‑151 (MQ=255)
                           atcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATg                                                                                                                      <  2:1867559/151‑1 (MQ=255)
                           atcatcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATg                                                                                                                      >  1:747025/1‑151 (MQ=255)
                              atcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGGGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACg                                                                                                                   >  1:2134274/1‑151 (MQ=255)
                              atcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACg                                                                                                                   >  2:1101335/1‑151 (MQ=255)
                               tcatTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGc                                                                                                                  >  1:1137982/1‑151 (MQ=255)
                                catTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGc                                                                                                                  <  2:275890/150‑1 (MQ=255)
                                    aCTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGc                                                                                                             >  1:1311117/1‑151 (MQ=255)
                                      tGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCg                                                                                                            >  2:575875/1‑150 (MQ=255)
                                           cATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTgg                                                                                                      >  1:1861033/1‑151 (MQ=255)
                                              cAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGca                                                                                                    <  2:1963276/150‑1 (MQ=255)
                                                ggTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGcatca                                                                                                 <  1:1101355/151‑1 (MQ=255)
                                                   gAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATgg                                                                                              >  2:1900971/1‑151 (MQ=255)
                                                   gAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATgg                                                                                              >  2:1799397/1‑151 (MQ=255)
                                                   gAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATgg                                                                                              >  1:505272/1‑151 (MQ=255)
                                                   gAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATg                                                                                               <  1:1156561/150‑1 (MQ=255)
                                                       aaGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTg                                                                                          >  2:958436/1‑151 (MQ=255)
                                                         gtgtgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCg                                                                                        <  2:242214/151‑1 (MQ=255)
                                                          tgtgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCgg                                                                                       >  1:1054320/1‑151 (MQ=255)
                                                          tgtgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCgg                                                                                       >  1:547259/1‑151 (MQ=255)
                                                           gtgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCgg                                                                                       <  1:1492274/150‑1 (MQ=255)
                                                            tgtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCgg                                                                                       >  1:1553526/1‑149 (MQ=255)
                                                             gtCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCg                                                                                        >  1:120891/1‑147 (MQ=255)
                                                                 agagCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCt                                                                                >  1:851490/1‑151 (MQ=255)
                                                                   agCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCtt                                                                               >  2:1006846/1‑150 (MQ=255)
                                                                     cGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTc                                                                              <  2:1369098/149‑1 (MQ=255)
                                                                      ggCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGGAATCTTCAGt                                                                           >  2:313491/1‑151 (MQ=255)
                                                                      ggCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAg                                                                            <  2:482038/150‑1 (MQ=255)
                                                                       gCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTc                                                                          <  1:845474/151‑1 (MQ=255)
                                                                         aTCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCAt                                                                        >  1:711526/1‑151 (MQ=255)
                                                                         aTCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCAt                                                                        <  1:199046/151‑1 (MQ=255)
                                                                          tCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATg                                                                       >  1:1283861/1‑151 (MQ=255)
                                                                            aaaGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGa                                                                      <  1:1731934/150‑1 (MQ=255)
                                                                             aaGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAAt                                                                    <  1:1409094/151‑1 (MQ=255)
                                                                              aGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAAtt                                                                   >  1:1296857/1‑151 (MQ=255)
                                                                                tGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTc                                                                  >  1:1687447/1‑150 (MQ=255)
                                                                                 gCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCa                                                                 <  1:869016/150‑1 (MQ=255)
                                                                                    gggACTGGCAGCGCTCGATAGCACCGCAACCCCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACt                                                               <  2:1098293/149‑1 (MQ=255)
                                                                                     ggACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACg                                                            >  2:1175641/1‑151 (MQ=255)
                                                                                          ggCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTcc                                                         <  2:707398/149‑1 (MQ=255)
                                                                                             aGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAat                                                    >  2:662014/1‑151 (MQ=255)
                                                                                              gcgcTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                   <  2:1594298/151‑1 (MQ=255)
                                                                                                gcTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattat                                                 <  1:1576336/151‑1 (MQ=255)
                                                                                                  tCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt                                                >  1:747015/1‑150 (MQ=255)
                                                                                                  tCGATAGCACCGAAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattat                                                 <  1:139683/149‑1 (MQ=255)
                                                                                                   cGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAAttatta                                               <  1:231902/150‑1 (MQ=255)
                                                                                                   cGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAg                                              <  1:1216436/151‑1 (MQ=255)
                                                                                                    gATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt                                                >  1:1805446/1‑148 (MQ=255)
                                                                                                    gATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt                                                >  1:1600023/1‑148 (MQ=255)
                                                                                                     aTAGCACCGCAACACCTTGCTATGACAGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGaa                                            <  2:567583/151‑1 (MQ=255)
                                                                                                           ccGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGaca                                      <  1:1360830/151‑1 (MQ=255)
                                                                                                           ccGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGaca                                      <  1:104039/151‑1 (MQ=255)
                                                                                                           ccGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGaca                                      <  2:1054305/151‑1 (MQ=255)
                                                                                                           ccGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGac                                       <  1:1649203/150‑1 (MQ=255)
                                                                                                            cGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGacac                                     <  2:1268214/151‑1 (MQ=255)
                                                                                                             gCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACAcc                                    >  2:1433851/1‑151 (MQ=255)
                                                                                                             gCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACAcc                                    <  1:65618/151‑1 (MQ=255)
                                                                                                             gCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACAcc                                    >  2:1720421/1‑151 (MQ=255)
                                                                                                              cAACACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCg                                   >  2:1257322/1‑151 (MQ=255)
                                                                                                               aaCACCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGc                                  <  2:505262/151‑1 (MQ=255)
                                                                                                                  acCTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAgg                               >  1:1349150/1‑151 (MQ=255)
                                                                                                                    cTTGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGcc                             >  1:578868/1‑151 (MQ=255)
                                                                                                                      tGCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGcc                             <  2:1178870/149‑1 (MQ=255)
                                                                                                                       gCTATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTg                          <  1:969469/151‑1 (MQ=255)
                                                                                                                         tATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGAc                        >  2:1633358/1‑151 (MQ=255)
                                                                                                                         tATGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGAc                        >  2:53032/1‑151 (MQ=255)
                                                                                                                          aTGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACg                       <  2:2006068/151‑1 (MQ=255)
                                                                                                                          aTGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACg                       <  2:2045806/151‑1 (MQ=255)
                                                                                                                           tGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACg                       <  2:663643/150‑1 (MQ=255)
                                                                                                                           tGACCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACg                       <  1:1015145/150‑1 (MQ=255)
                                                                                                                             aCCGCGATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCg                    >  1:1567122/1‑151 (MQ=255)
                                                                                                                               cgcgATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGtt                  <  1:2091819/151‑1 (MQ=255)
                                                                                                                                gcgATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTa                 <  1:898655/151‑1 (MQ=255)
                                                                                                                                  gATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                   <  2:1704673/115‑1 (MQ=255)
                                                                                                                                  gATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAatt                                                   >  1:1704704/1‑115 (MQ=255)
                                                                                                                                  gATACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTa                 >  2:852349/1‑149 (MQ=255)
                                                                                                                                    tACGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGc              >  1:448675/1‑150 (MQ=255)
                                                                                                                                     aCGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCa             <  1:590539/150‑1 (MQ=255)
                                                                                                                                     aCGGCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCa             >  1:1557468/1‑150 (MQ=255)
                                                                                                                                       ggCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATg          <  2:492495/151‑1 (MQ=255)
                                                                                                                                       ggCCCAGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATg          >  1:940524/1‑151 (MQ=255)
                                                                                                                                            aGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCgg      >  1:623913/1‑150 (MQ=255)
                                                                                                                                            aGGCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGt     <  2:1822924/151‑1 (MQ=255)
                                                                                                                                             ggCGCCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGtt    >  2:1852229/1‑151 (MQ=255)
                                                                                                                                               cgcCGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGtttt  >  2:799173/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTT  >  NC_000913/2208878‑2209171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A