Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,863,313 |
T→C |
A181A (GCT→GCC) |
gapA → |
glyceraldehyde‑3‑phosphate dehydrogenase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,863,313 | 0 | T | C | 98.2%
| 399.0
/ ‑4.0
| 108 | A181A (GCT→GCC) | gapA | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (62/44); total (64/44) |
| Fisher's exact test for biased strand distribution p-value = 5.13e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 108 total aligned reads displayed.
AGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCG > NC_000913/1863166‑1863460
|
aGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACt > 2:626106/1‑151 (MQ=255)
gcgcTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTc > 2:1731885/1‑150 (MQ=255)
ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCg > 1:42530/1‑151 (MQ=255)
ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCg > 2:549798/1‑151 (MQ=255)
ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCg > 2:561394/1‑151 (MQ=255)
ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCg > 2:1467058/1‑151 (MQ=255)
gACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGtt > 2:1119192/1‑150 (MQ=255)
aaaaaTATGCGGGCCAGGACTTCGTTTCCAACGCTCCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAATTTATCAACGATAACTCCGGCATCATCAAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAAcc < 1:1640450/144‑1 (MQ=255)
aCAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCg < 2:526138/147‑1 (MQ=255)
cAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGAt > 2:685644/1‑151 (MQ=255)
aaaTATGCTGGCCAGGACATCGTTTCCAACGCTTCCTCCCCCACCAACTGCCTGGCCCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCCCGCTACTACCGCCACTCAGAAAACCGtt < 2:1438970/147‑1 (MQ=255)
aaTATGCTAGCCAGGACATCGTTTCCAACGCTTACTTCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATgg > 1:954624/1‑151 (MQ=255)
atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGc > 1:456389/1‑151 (MQ=255)
atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGc > 3:308474/1‑151 (MQ=255)
gCTGGCCAGGACATCGTTCCCAACGCTTCCTGCACCACCAACTGCCTGGCCCCGCTGTCTAAAGTTATCACCGATAACTTCGGCATCATCGAAGGTTTAAGGACCCCCGTTCACTCTACTACCGCCACTCAGAAAACCGTTGATGGCCCg < 1:1060213/150‑1 (MQ=255)
ccAGGACATCGTTTCCACCGCTTCCTCCCCCCCCACCTGCTTGGCTCCGCTGGCTAAAGTTATCAACAATACCTTCGGCATCATCGAAGTTCTGATGCCCACCGTTCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTca < 2:58218/150‑1 (MQ=255)
aGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTcaca > 2:741465/1‑150 (MQ=255)
aGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTcaca > 2:753644/1‑150 (MQ=255)
aGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTcaca > 2:999802/1‑150 (MQ=255)
ggACATCTTTTCCAACGCTTCCTGCACCACCACCTGCCTGGCTCCGCTGGCAAAATTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCCCCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACaaa < 4:483762/151‑1 (MQ=255)
ggACATCGTTTCAAACGCTCCCTGCCCCCCCAACCGCCTGGCTCCTCTGCTTAAAGTTATAAACAATAATTTCGGAATCAAGGAAGGTCTGACGACCACGTTCCCCTCTCTTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACaa < 1:1074696/150‑1 (MQ=255)
gACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACaa > 2:1656548/1‑149 (MQ=255)
aCATTGTTTCCACCGCTTCCTTCCCCCCCATCTGCCGGGCCCCGCTGGCTAAATTTATCAACGATACCTTCGGCATCATGAAAGGTCTGATCCCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGa < 1:246901/151‑1 (MQ=255)
aCATCGTTTCCAACGCTTCCTGCACCCCCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCCCCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGa < 2:1047424/151‑1 (MQ=255)
gTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgc > 1:445931/1‑151 (MQ=255)
tttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcg > 2:38012/1‑151 (MQ=255)
caaaCGCTCCCGGCGCCACCAACGGCCGTGTCCCGCTGCCTAAATTAATCAACTATAGTTTCGTCGTAATCGAGGGTAGGGTGCCCACCTTGCACTCAACTTCCGCCACTCAGAAAACCGTGGATGGCCCGTCTCACAAAGACTGgcg < 1:1293944/146‑1 (MQ=255)
aaCGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCgcggcg > 1:1247399/1‑151 (MQ=255)
cGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGcggcgg < 3:107637/150‑1 (MQ=255)
gCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGcc > 1:1321253/1‑151 (MQ=255)
gCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGcc > 1:1295059/1‑151 (MQ=255)
cTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcg > 2:175587/1‑151 (MQ=255)
cctccccccccaACTGCCTGCCTCCGCTGGCTAAATTAATCAACGATAACTTGGGCACCATCGAAGGTCTGATGCCCCCCTTCCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcgcg < 2:1650831/141‑1 (MQ=255)
ccTGCCCCCCCAACTGCGTGGCCCCGGGGGTTAAGTTTATCAACGATATCTTCGGCGTCATCAAAGGTGTGATGACCACCGTTCCCGCTACTCCCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcgc < 2:1561577/149‑1 (MQ=255)
tGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcggcg > 4:561395/1‑151 (MQ=255)
acaccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGACGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCt > 1:379263/2‑149 (MQ=255)
caccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTcc > 1:1154226/1‑151 (MQ=255)
caacctgcagggCCCCGCTGGCAAAAGTTATCAACAATAACTTCGGAATCATCGAAGGTCTGATGCCCCCCGTCCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCa < 2:1120332/141‑1 (MQ=255)
aaCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCg < 4:52186/111‑1 (MQ=255)
aaCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGTCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTacc > 2:202402/1‑148 (MQ=255)
aaCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCg > 3:52187/1‑111 (MQ=255)
aaCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc > 1:779130/1‑148 (MQ=255)
cTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAAcatc > 2:937838/1‑150 (MQ=255)
ggCTCCGTTGGCTAAAGTTATCAACGATAACTTGGGCATCATCGAAGTTCTGATGCCCCCCTTTCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAAcatcat < 2:698262/150‑1 (MQ=255)
gCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATcc > 2:378323/1‑151 (MQ=255)
gCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATcc > 1:612956/1‑151 (MQ=255)
tCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCg > 2:240691/1‑151 (MQ=255)
ccGCTGGCTAAATTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATccc < 3:375263/149‑1 (MQ=255)
ccGCTGGCTAAAGTTATCAGCATTATCTGCGTAATCAACGACGGTTTGATCACCCCCGCGCTCGCTCCAACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGt < 1:652331/151‑1 (MQ=255)
cGCTGGCAAAAGTTATCAACAATATCTTCGCCATCATCAAAGCTCTTATCACCCCCTTTCACCCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATcc < 4:112314/147‑1 (MQ=255)
tGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCctc > 2:1532158/1‑151 (MQ=255)
tGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCctc > 1:338166/1‑151 (MQ=255)
tGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCct > 3:50151/1‑150 (MQ=255)
ggCTAAATTTATAAACGATACCTTCGGCATCATCGAAGGTCTGATACCCCCCTTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCATCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCctct < 2:1078398/151‑1 (MQ=255)
cTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTa > 1:770626/1‑150 (MQ=255)
tAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTAcc > 1:219197/1‑151 (MQ=255)
aaaGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCCCCGTTCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCg < 2:102558/151‑1 (MQ=255)
aaaGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcgc > 4:105639/1‑108 (MQ=255)
aaaGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGgcgc < 3:105643/108‑1 (MQ=255)
aaaGTTACAAACAATAACTTCGGCATCACCGAAGGTCTGATGACCCCCTTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTAc < 2:578755/149‑1 (MQ=255)
aGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGt > 2:1309083/1‑151 (MQ=255)
taccAACGTTAACTTCGGCATCATGAAAGGTCTGATGCCCTCCGTTCACCCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGt < 1:1567149/145‑1 (MQ=255)
aTCAACGATAACTTCGGCATCATCGAAGGTCTGATGCCCCCCTTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGtgct < 4:356234/150‑1 (MQ=255)
aTCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGtgct > 1:1474572/1‑150 (MQ=255)
tCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGtgctgc > 2:766882/1‑151 (MQ=255)
aaCGATACTTTCGGCTTCATCGAAGGTCTGATGCCCCCCGTCCCCGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGtgc < 1:977591/146‑1 (MQ=255)
aaCGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTgctgct > 2:204960/1‑150 (MQ=255)
aaCGATAACTTCGCCATCATGGAAGGTCTGAGGACCCCCGTTCCCGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTa < 3:427899/151‑1 (MQ=255)
cGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCCCGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTaaa < 2:315761/151‑1 (MQ=255)
gATAACTTCGGCATCATCGAAGGGCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATCGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGCGCCGCTaa > 1:639649/1‑149 (MQ=255)
aTAAGTTCGGAAACATAGAAGGTTTGAGGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGc < 2:1169052/151‑1 (MQ=255)
aTAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGc > 4:500431/1‑151 (MQ=255)
tAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCt > 2:237469/1‑151 (MQ=255)
aaCTCCGGCATCATCGAAGGTCTGATGCCCCCCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTaaa < 1:1668121/147‑1 (MQ=255)
ttCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGt > 2:1521243/1‑149 (MQ=255)
ttCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGt > 1:804487/1‑149 (MQ=255)
cGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAgg > 2:977326/1‑150 (MQ=255)
cGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGt > 1:224793/1‑151 (MQ=255)
ggcacccgcGAAGTTCTGAAGACCCCCGTCCACGCTACTCCCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTa < 1:198397/143‑1 (MQ=255)
catcatCGAAGTTCTAATGCCCCCCGTTCCCGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTaa < 1:438845/150‑1 (MQ=255)
atcatcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTaa > 1:1474769/1‑149 (MQ=255)
aacatcGAAGTTCTGAGCCCCACCGTTCGCTGTTCAACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTGCCGGTGCTGCTAAACCTGTAGGTAAAg < 1:564895/149‑1 (MQ=255)
tcatcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGt > 1:1562877/1‑151 (MQ=255)
atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTAc > 2:1119946/1‑151 (MQ=255)
aaGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGc > 3:189623/1‑150 (MQ=255)
ggTTTGATGCCCCCCTTCCACGCTCCTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTg < 1:173469/147‑1 (MQ=255)
tgatgaCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACt > 1:596066/1‑151 (MQ=255)
gatgaCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTg < 3:209295/151‑1 (MQ=255)
gatgaCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTg > 2:1376796/1‑151 (MQ=255)
gaCCACCGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAAt > 1:251977/1‑151 (MQ=255)
ccaccGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATgg > 2:257167/1‑151 (MQ=255)
caccGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGc > 4:251263/1‑151 (MQ=255)
cGTTCACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCaa > 3:514853/1‑150 (MQ=255)
tCACGCTACTACAGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGACTGGCAAact > 3:327032/1‑150 (MQ=255)
cACGCTACTACCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAactg < 4:91050/150‑1 (MQ=255)
tactacCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGt > 2:911230/1‑151 (MQ=255)
tactacCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGt > 2:1622337/1‑151 (MQ=255)
tacCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATg > 1:677447/1‑151 (MQ=255)
acCGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATg < 2:456464/150‑1 (MQ=255)
cGCCACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGgcg > 3:376971/1‑151 (MQ=255)
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AGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCG > NC_000913/1863166‑1863460
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
