Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,068 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,0680GC99.6% 629.3 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (157/110);  total (157/111)
Fisher's exact test for biased strand distribution p-value = 4.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,0690CG99.6% 631.6 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (157/110);  minor base A (0/1);  total (157/111)
Fisher's exact test for biased strand distribution p-value = 4.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,0700TA99.6% 634.9 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (157/110);  minor base G (0/1);  total (157/111)
Fisher's exact test for biased strand distribution p-value = 4.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 268 total aligned reads displayed.

GGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTAGCCTGGCTTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAG  >  CP042583/603791‑604343
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                 
ggATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTgcga                                                                                                                                                                                                                                                                          <  2:2150716/289‑4 (MQ=255)
        cgTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGAt                                                                                                                                                                                                                                                                  >  2:2120454/1‑289 (MQ=255)
         gTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATGCTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGAt                                                                                                                                                                                                                                                                  <  2:491739/288‑1 (MQ=255)
                 cTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATc                                                                                                                                                                                                                                                          >  2:1143214/1‑288 (MQ=255)
                    aTCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCAcgc                                                                                                                                                                                                                                                      <  1:2120454/289‑1 (MQ=255)
                            taaaaaTTTGGGCAAATTCAATAAATTGAAGGAAAGAAGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGTCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGa                                                                                                                                                                                                                                              <  2:2017857/286‑1 (MQ=255)
                               aaaTTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAg                                                                                                                                                                                                                                           >  2:1327745/1‑289 (MQ=255)
                                    tgtgCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCg                                                                                                                                                                                                                                                                <  2:1712675/263‑1 (MQ=255)
                                      tgCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGa                                                                                                                                                                                                                                    >  2:1354970/1‑289 (MQ=255)
                                      tgCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGa                                                                                                                                                                                                                                    >  2:2110188/1‑289 (MQ=255)
                                                   aaTTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAag                                                                                                                                                                                                                       <  1:1506384/289‑1 (MQ=255)
                                                               tACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGAt                                                                                                                                                                                                           >  1:1794422/1‑289 (MQ=255)
                                                                aCGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATg                                                                                                                                                                                                          <  1:1050606/289‑1 (MQ=255)
                                                                     ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCAcgc                                                                                                                                                                                                                                                      >  1:2024921/1‑240 (MQ=255)
                                                                      gCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGtt                                                                                                                                                                                                    >  1:1528342/1‑289 (MQ=255)
                                                                           aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAagcagc                                                                                                                                                                                                                   <  1:68316/269‑1 (MQ=255)
                                                                           aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAagcagc                                                                                                                                                                                                                   >  2:68316/1‑269 (MQ=255)
                                                                           aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGAACCATGTAGATGCCGGTTAATaa                                                                                                                                                                                               >  2:1644443/1‑288 (MQ=255)
                                                                                aCGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACg                                                                                                                                                                                              <  2:108072/285‑1 (MQ=255)
                                                                                     tCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTcac                                                                                                                                                                                      >  2:1449280/1‑288 (MQ=255)
                                                                                       aaGCGTCGCATCAGGCAACGGTGCTCGCCTATTAAGACTCCAGCGCCAGCGCGCTGTTTCTGAATTGCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGAGCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACAcc                                                                                                                                                                                   <  1:1151236/289‑1 (MQ=255)
                                                                                                     gCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATg                                                                                                                                                                      <  2:1528342/288‑1 (MQ=255)
                                                                                                              cTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGAt                                                                                                                                                                                                                                   <  2:797185/218‑1 (MQ=255)
                                                                                                              cTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGAt                                                                                                                                                                                                                                   >  1:797185/1‑218 (MQ=255)
                                                                                                                  ccTATTAAGACTCCGGGGCCAGCGCGCGGTTTCTGAATTTCAGAGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcg                                                                                                                                                         <  2:2200773/288‑3 (MQ=255)
                                                                                                                      ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTg                                                                                                                                                                                                                                                                             <  1:2134152/168‑1 (MQ=255)
                                                                                                                      ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcgacatg                                                                                                                                                    >  1:1263648/1‑282 (MQ=255)
                                                                                                                      ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcgacatg                                                                                                                                                    >  2:551788/1‑282 (MQ=255)
                                                                                                                      ttAAGACTCCAGCGCCAGCGCGCGGTTCCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATGTGATCAAATACTTCAATACACGCATTGATGGAGTAGTTGACCGCCCCGGAACCATCAAACGAAGCCTGCCATGTCTGCTCGTCCATCACGCACGCCAGATAGCTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTGATCCGCCGGTCACACCGGGGATTTCAATGCACGTCATTTgctacatg                                                                                                                                                    >  2:243048/1‑282 (MQ=255)
                                                                                                                           aCTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCaa                                                                                                                                                >  1:1986927/1‑288 (MQ=255)
                                                                                                                           aCTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCaa                                                                                                                                                >  2:875465/1‑288 (MQ=255)
                                                                                                                             tCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTATGATCGGCAATCTCGTCCGACAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCg                                                                                                                                             >  1:1374235/1‑289 (MQ=255)
                                                                                                                                agcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                           >  2:1573058/1‑288 (MQ=255)
                                                                                                                                       gcgcgcGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCATGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGGCATGGAAAGCGGGTCGATcaa                                                                                                                                   >  2:292863/1‑289 (MQ=255)
                                                                                                                                           gccttttCTGACTGTCAGCCACTGATACCGCCAAATCATCACTACCAGTCCTACACACGCCAGTTCGCCCCAGTTAATTTGATCAAATATTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGAAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGt                                                                                                                               <  1:1842551/285‑1 (MQ=255)
                                                                                                                                                         tCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCa                                                                                                                  >  1:902629/1‑288 (MQ=255)
                                                                                                                                                               ccTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGTAATCCCGCCCGCCAGATAGTGCGCGCACGCGCCGGACAGACGCATCTACATGCGGCTTTAGCATCCGGTCACTCCGGGGATTTTAATGCGCGTACATAGCGTCATGGCAACCGGGTCCTTAAACAGGTCCTCCAAGcctaacccgc                                                                                                            >  2:1688398/1‑280 (MQ=255)
                                                                                                                                                                cTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:1449280/289‑1 (MQ=255)
                                                                                                                                                                cTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:292863/289‑1 (MQ=255)
                                                                                                                                                                cTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:551788/289‑1 (MQ=255)
                                                                                                                                                                            aaTCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGa                                                                                                                                                                                                                                              <  2:564997/145‑1 (MQ=255)
                                                                                                                                                                                 tcaGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAg                                                                                         <  1:1327745/289‑1 (MQ=255)
                                                                                                                                                                                   aGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                       >  2:741959/1‑289 (MQ=255)
                                                                                                                                                                                          gTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGc                                                                                                      <  2:223169/267‑1 (MQ=255)
                                                                                                                                                                                          gTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAgaga                                                                                >  2:880412/1‑289 (MQ=255)
                                                                                                                                                                                              tcagacggCCAGTGCGCCCCAGGTAATTTGATCAAGTACATCAAGATATGCATGGATGGAGTAGTTGATCGCCCCGGAAGCATCAACCGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                            <  2:1096303/282‑1 (MQ=255)
                                                                                                                                                                                               acacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTa                                                                                                   >  1:1750744/1‑265 (MQ=255)
                                                                                                                                                                                               acacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTa                                                                                                   <  2:1750744/265‑1 (MQ=255)
                                                                                                                                                                                               acacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGt                                                                           >  1:480407/1‑289 (MQ=255)
                                                                                                                                                                                               acacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGt                                                                           >  1:376973/1‑289 (MQ=255)
                                                                                                                                                                                                cacacGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTg                                                                          >  1:1336286/1‑289 (MQ=255)
                                                                                                                                                                                                   ccGCCCGTGCGCCCCAGGTAATTTGATCAAAAACTTCAATAGTTGCATTGATGGAGTAGTTGATCGCCCCGGAAGAATCAAACGAAGCCTGCGATGTCGGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGAcc                                                                       <  2:1263648/288‑1 (MQ=255)
                                                                                                                                                                                                     gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                     >  2:26497/1‑289 (MQ=255)
                                                                                                                                                                                                     gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                     >  2:1044883/1‑289 (MQ=255)
                                                                                                                                                                                                     gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                     >  1:1012431/1‑289 (MQ=255)
                                                                                                                                                                                                          tGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCa                                                                                                                                                 <  1:1473967/208‑1 (MQ=255)
                                                                                                                                                                                                          tGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          >  1:1302029/1‑247 (MQ=255)
                                                                                                                                                                                                          tGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  2:1516656/247‑1 (MQ=255)
                                                                                                                                                                                                          tGCGCCCCAGGTAATTTGACCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCCCACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCATTGGCAGAGAAGAGTTACCATACAt                                                                 >  1:1228194/1‑288 (MQ=255)
                                                                                                                                                                                                             gcCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          >  2:447580/1‑244 (MQ=255)
                                                                                                                                                                                                             gcCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:447580/244‑1 (MQ=255)
                                                                                                                                                                                                               cccAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTTATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATc                                                                                                                >  1:170156/1‑236 (MQ=255)
                                                                                                                                                                                                               cccAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCgg                                                            >  2:1829407/1‑288 (MQ=255)
                                                                                                                                                                                                                   ggTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:591687/238‑1 (MQ=255)
                                                                                                                                                                                                                      aaTTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAg                                                                                                                      <  1:882425/223‑1 (MQ=255)
                                                                                                                                                                                                                      aaTTTGATCAAATACTTCAATATATGCATTGAGGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCg                                                     <  1:753237/288‑1 (MQ=255)
                                                                                                                                                                                                                       aTTTGATCAAATACTTCAATTAATGCATGGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                   <  2:376973/289‑1 (MQ=255)
                                                                                                                                                                                                                       aTTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                   <  1:245275/289‑1 (MQ=255)
                                                                                                                                                                                                                            aTCAAATAATTCCATATAGGCATGGATGGAGTAGTTGATCGCCCCGGAAGCAGCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCtt                                              <  2:1451992/289‑1 (MQ=255)
                                                                                                                                                                                                                              cAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTaa                                            >  1:60548/1‑289 (MQ=255)
                                                                                                                                                                                                                                  tACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTc                                        >  1:389170/1‑289 (MQ=255)
                                                                                                                                                                                                                                   aCTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCa                                       <  1:1645319/289‑1 (MQ=255)
                                                                                                                                                                                                                                      tCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          >  1:2244833/1‑219 (MQ=255)
                                                                                                                                                                                                                                          tatatGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCa                                <  1:922710/289‑1 (MQ=255)
                                                                                                                                                                                                                                               gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAag                                                                                                                                                                                                                       <  1:1275121/101‑1 (MQ=255)
                                                                                                                                                                                                                                               gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                            <  1:2210425/240‑1 (MQ=255)
                                                                                                                                                                                                                                               gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAAt                            >  2:1303474/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATc                           >  2:1120281/1‑289 (MQ=255)
                                                                                                                                                                                                                                               gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGT‑GCAGAGAAGAGTGACCATACATTGCGGACCAGCCGGCGCTAAAGGTCAGAATGCAGAGTcc                          >  2:949735/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aTTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTCCGGACCAGCGGGCGCTTAAGGTCAGACGGCAGAATCCg                         >  2:886823/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aTTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCCAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAACCGGCGCTTCAGGGCAGCATGCACAAAccc                         >  2:1905602/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                   >  1:508127/1‑228 (MQ=255)
                                                                                                                                                                                                                                                    gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCa                                >  1:1962962/1‑279 (MQ=255)
                                                                                                                                                                                                                                                    gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgc                       >  1:1590207/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgc                       >  2:2118770/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     aTGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                   <  2:1978060/227‑1 (MQ=255)
                                                                                                                                                                                                                                                        gAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGc                                                                                                      >  2:2245694/1‑205 (MQ=255)
                                                                                                                                                                                                                                                        gAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCAGGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTTCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCtca                  >  1:851495/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         agtagtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCCTCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCtca                  >  2:1646564/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          gtagtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCtcat                 <  2:1510014/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           tagtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCtcatca               >  1:2164872/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             gtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCag              >  2:1193913/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             gtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCAGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCag              >  1:334232/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              ttGACCGACCCGAAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCagg             <  2:60548/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                taTCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCg                                                                                                                           >  1:1719133/2‑176 (MQ=255)
                                                                                                                                                                                                                                                                  tCGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaag        >  1:1087160/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   cGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGagaaga                                                                             >  1:1513710/1‑219 (MQ=255)
                                                                                                                                                                                                                                                                   cGCCCCGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATGCGGCGCTCATCaggccaag        >  1:1237419/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     ccccGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaagg       >  1:1429656/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                        cGGAAGCATCAAACGAAGCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGgccaaggccaag  >  1:2118345/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                 
GGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTAGCCTGGCTTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAG  >  CP042583/603791‑604343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A