Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,068 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,0680GC99.1% 506.4 / ‑5.5 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (126/90);  minor base A (0/2);  total (126/92)
Fisher's exact test for biased strand distribution p-value = 1.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP042583604,0690CG99.1% 501.1 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (126/90);  total (126/92)
Fisher's exact test for biased strand distribution p-value = 1.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,0700TA99.1% 511.5 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (125/90);  minor base C (1/1);  total (126/92)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 218 total aligned reads displayed.

CGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTA‑GCCTGGCTTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAG  >  CP042583/603790‑604343
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
cGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTgcg                                                                                                                                                                                                                                                                           >  2:137997/1‑287 (MQ=255)
                     aTCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCAcgc                                                                                                                                                                                                                                                      <  1:826828/289‑1 (MQ=255)
                            cTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCTCGCAAGGTCTGATCGGCAATCACGCCCGCCAg                                                                                                                                                                                                                                               >  2:49708/1‑289 (MQ=255)
                             tACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGa                                                                                                                                                                                                                                              <  1:1829099/289‑1 (MQ=255)
                                       tgCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTTCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAATAAGTTCGCGa                                                                                                                                                                                                                                    >  2:1547893/1‑289 (MQ=255)
                                        gCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGAt                                                                                                                                                                                                                                   <  2:1623191/289‑1 (MQ=255)
                                          aaaTTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTTCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATcg                                                                                                                                                                                                                                 <  2:892744/289‑1 (MQ=255)
                                                    aaatGCAGGAAAAAGGTAGGCCGGAAAAGAAGCCTCAAGGGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAag                                                                                                                                                                                                                       <  2:1413082/286‑1 (MQ=255)
                                                       tGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAagcag                                                                                                                                                                                                                    <  1:1263719/289‑1 (MQ=255)
                                                                 aCGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATg                                                                                                                                                                                                          <  2:408338/289‑1 (MQ=255)
                                                                   gTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGcc                                                                                                                                                                                                        <  1:947884/289‑1 (MQ=255)
                                                                      ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATAAAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGAAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGACAGTTACTGATCGGGCCAGAAAGCAGCATGTAGAGGCCggg                                                                                                                                                                                                     >  2:1749956/1‑288 (MQ=255)
                                                                            aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCAc                                                                                                                                                                                                                                                        <  1:330326/232‑1 (MQ=255)
                                                                            aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATAc                                                                                                                                                                                               >  1:1687371/1‑289 (MQ=255)
                                                                                       cAAGCGTCGCATCAGGAATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTcaca                                                                                                                                                                                     <  1:603776/288‑1 (MQ=255)
                                                                                           cGTCGCATCAGGCATCGGTGCTGGCCTATTCAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATCTGCATTGATGGAGTCGTTGATCGCCCCGGAAGCATCCAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCCGATCGTTCGCGATCGCGCGAGAAAGCAGCATGTAGATGCAGGTTAATTCGCCGGTCACACTggg                                                                                                                                                                                >  1:1044306/1‑289 (MQ=255)
                                                                                            gTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCgg                                                                                                                                                                                 <  1:109018/287‑1 (MQ=255)
                                                                                                                tGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAAttt                                                                                                                                                            >  1:683008/1‑288 (MQ=255)
                                                                                                                   ccTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcg                                                                                                                                                         <  1:1618707/288‑3 (MQ=255)
                                                                                                                   ccTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcg                                                                                                                                                         <  2:1535682/288‑3 (MQ=255)
                                                                                                                       ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCgg                                                                                                                                                                                 >  1:1513219/1‑260 (MQ=255)
                                                                                                                       ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCgg                                                                                                                                                                                 <  2:1513219/260‑1 (MQ=255)
                                                                                                                       ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcgacatg                                                                                                                                                    >  1:745730/1‑282 (MQ=255)
                                                                                                                       ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcgacatg                                                                                                                                                    >  1:1361321/1‑282 (MQ=255)
                                                                                                                              tCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCg                                                                                                                                             <  2:851269/289‑1 (MQ=255)
                                                                                                                              tCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCg                                                                                                                                             >  2:1818068/1‑289 (MQ=255)
                                                                                                                                cagcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                           <  1:732899/289‑1 (MQ=255)
                                                                                                                                 agcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                           >  1:44729/1‑288 (MQ=255)
                                                                                                                                   cgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTCCAATGCGCGGAATTGGCGACATGGCAACCGGGTCg                                                                                                                                        >  2:758850/1‑289 (MQ=255)
                                                                                                                                        gcgcgcGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATaaa                                                                                                                                   >  2:1331458/1‑289 (MQ=255)
                                                                                                                                        gcgcgcGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATaa                                                                                                                                    >  1:1426960/1‑288 (MQ=255)
                                                                                                                                                        tttCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGcc                                                                                                                    >  2:1928130/1‑288 (MQ=255)
                                                                                                                                                                 cgggaacaacaaaaTCATCCGAAACAGGCCTACACAGGCCGGTGCGCCCAA‑GGGAATTTGATCAAATACTTCAATATATGCATGGATGGAGTAGTTGAACGCCACGGAAGCAGGAAAACAA‑GCCTGAGATGTCTGCTCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCAGGGAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCAGCACCGcc                                                                                                          <  2:1044306/278‑1 (MQ=255)
                                                                                                                                                                 cTGATACGTCCAAACCATCAGTACCAGTCCTACACACGCCACTGAGCCCCA‑GGTAATTGGATCAAAAACTTCAAGATATGCATTGATGGAGTAGTTGATCGCCCCGGAGGCATCAAACGAA‑GCCTGCGATGTCGGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  2:1444358/289‑1 (MQ=255)
                                                                                                                                                                 cTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:526187/289‑1 (MQ=255)
                                                                                                                                                                  tGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATaaa                                                                                                                                   <  1:1342483/263‑1 (MQ=255)
                                                                                                                                                                          ccAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAAt                                                                                                 >  1:1168666/1‑289 (MQ=255)
                                                                                                                                                                           cAAATCATCAGCACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATa                                                                                                <  1:1749956/289‑1 (MQ=255)
                                                                                                                                                                                  tcaGTACCAGTCCTAAACCCGCCAGTG‑GCCCCACGGTAATTTGATCAAATACTTCAATATATGCGTTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGAGGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAg                                                                                         <  2:166831/289‑1 (MQ=255)
                                                                                                                                                                                  taagaaccataccaacagacGCCAGGCGGCCCTA‑GGTAATTTGATCAAAGACTTAAATGTGTGCATGGATGGAGGAGTTGAGCGCCCCGGAGGCTTCAAACGAA‑GGCTGCGATGTCTGATCGGCAATCCCGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTGCAATGCGCGTAATTTGCGACATGGCAACCGAGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAg                                                                                         <  2:1079570/275‑1 (MQ=255)
                                                                                                                                                                                    aGTACCAGTCGGAGAAGCGCCAGAGCGCACCA‑GGTAATTTAAGAAAATACTTAAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGAGCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                       <  2:1347693/289‑1 (MQ=255)
                                                                                                                                                                                       acctctcacaacaccGCCCGTGCGCCCCA‑GGTAATTTGATCAAAAACTTCAATATATGAATTGGTGGAGTAGTTGATCGCCCCAGCAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                       <  2:44729/272‑1 (MQ=255)
                                                                                                                                                                                        ccAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATCTGCATTGATGGAGTAGTTGACCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTGCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCTGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                   <  1:1606354/289‑1 (MQ=255)
                                                                                                                                                                                        ccAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                   <  1:1111742/289‑1 (MQ=255)
                                                                                                                                                                                               tACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                            <  1:1928130/289‑1 (MQ=255)
                                                                                                                                                                                                acacacGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATaaa                                                                                                                                   >  1:486754/1‑233 (MQ=255)
                                                                                                                                                                                                acacacGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagagg                                                                           >  2:382422/1‑288 (MQ=255)
                                                                                                                                                                                                acacacGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGt                                                                           >  1:1706553/1‑289 (MQ=255)
                                                                                                                                                                                                  acacGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGAGCGCCCCGGAAGCATAAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGa                                                                         <  2:601720/289‑1 (MQ=255)
                                                                                                                                                                                                  acacGCCAAGCCGCCCCA‑GGGAATTTGATCGAATACGTCACTATATGCACAGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATTTCTGGTCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGa                                                                         <  2:569379/289‑1 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGcc                                                                                                                                                                                                        >  1:500223/1‑158 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                       <  2:268709/271‑1 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                       >  1:268709/1‑271 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGagaag                                                                              <  2:1687146/280‑1 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                     >  2:1296212/1‑289 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                     >  1:191276/1‑289 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                     >  1:1536799/1‑289 (MQ=255)
                                                                                                                                                                                                      gCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCAACAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCACAAAGCAGCATGTAGATGCCGGCTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCCCCCCCCGGCCCAATACCATCAGCGGCAGACAAGAGTGAccct                                                                     >  2:1403982/1‑287 (MQ=255)
                                                                                                                                                                                                        ccggtcgcCACA‑GATAGTTTGATCAAACACTTAAGTAGATGCATGGATGGATAAGTTGATCGCCCCGGAAGCA‑CACAACGAGGCCTGCAATGTCTGATCGGCAATCACGCCCGCCAGATGGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATa                                                                    <  2:1575962/283‑1 (MQ=255)
                                                                                                                                                                                                         aGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGCTAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAAGACCATCCGTAGCAGACAAGAGAGACCATaaa                                                                  >  2:592728/1‑287 (MQ=255)
                                                                                                                                                                                                           tGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                           <  2:1882089/214‑1 (MQ=255)
                                                                                                                                                                                                           tGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                           >  1:1882089/1‑214 (MQ=255)
                                                                                                                                                                                                                         aTTTGATCAAATACTTCAATATAGGCATTGAGGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                   <  1:1195994/289‑1 (MQ=255)
                                                                                                                                                                                                                           ttGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCTCCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGgc                                                  >  1:843464/1‑288 (MQ=255)
                                                                                                                                                                                                                             gaacAAATACGTCTATATATGCATTGATGGGGTAGTTGATCGCCCCGGAAGCATCACGCGAA‑GCCTTCGATGTCTGATCGGCAATCACGCCCGCCAGAAAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGCTGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGAGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCt                                               <  2:589923/286‑1 (MQ=255)
                                                                                                                                                                                                                             gATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCt                                               <  2:1935015/289‑1 (MQ=255)
                                                                                                                                                                                                                               tCAAATACTTCATTATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCtt                                              <  1:256862/288‑1 (MQ=255)
                                                                                                                                                                                                                               tCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCCCCGCCAGGCCTAATACCAGCAGTGGCAAGGAAGAGTGACCCTACATTGCGGACCAGCGGGCGCGTa                                             >  2:1803497/1‑289 (MQ=255)
                                                                                                                                                                                                                               tCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCACCAGTGGCAGAGAACAGTGACCATACATTGCGGACCAGCGGGGGCTTa                                             >  2:796015/1‑289 (MQ=255)
                                                                                                                                                                                                                                    tACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTc                                        >  1:1815443/1‑289 (MQ=255)
                                                                                                                                                                                                                                     aCTTCAATCTAGGCATTGAGGGAGTTGTTGACCGCCCCGGAAGAATCAAACGAA‑GCCTGCGATGTCTGATCGGCCATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCa                                       <  2:1361321/289‑1 (MQ=255)
                                                                                                                                                                                                                                       ttCACTATATGCGTTGATGGAGTAGTTGACCGCCCCGGAAGCATCAACCGAA‑GCCGGCGATGTCTGGTCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGa                                     <  2:1915303/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGTGTAATACGCCGGTAACACAGGGGATTTACATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGACAAGCCCATAACCCCCACGCCTAATACCATCAGTAGCCAAGTAGCGTGACCATACATTGCGGACCAGTGGGCCCTTAAGGtaaaaa                                    >  2:1116601/1‑284 (MQ=255)
                                                                                                                                                                                                                                                 gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGGCAGAATGCAGaaa                            >  1:222398/1‑287 (MQ=255)
                                                                                                                                                                                                                                                      gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGagaag                                                                              >  2:538647/1‑233 (MQ=255)
                                                                                                                                                                                                                                                      gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATCCATTGCGGACCAGCGGGCGATTAAGGTCAGAATGCAGAACCCGgc                       >  2:1105954/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGACTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgc                       >  1:285019/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      gATGGAGTAGTGTATCGCCCCGGAAGAATCAAACGAA‑GCCTGCGATGTCTGATCGGCAAGCACGCCCGCCAGATAGTTCGCGAACGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                      <  1:1324523/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       agggggtagtTGATCGCCCCGGAAGCATCAAACGAA‑GCGTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                      <  2:298319/283‑1 (MQ=255)
                                                                                                                                                                                                                                                       aTGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                      <  1:967375/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       aTGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                      <  1:574712/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                            >  2:1784738/1‑233 (MQ=255)
                                                                                                                                                                                                                                                        tGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                            <  1:1784738/233‑1 (MQ=255)
                                                                                                                                                                                                                                                          gAGTAGTTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCCGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcggcca                  >  1:150084/1‑285 (MQ=255)
                                                                                                                                                                                                                                                             tagtTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCtcatca               >  2:1837394/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               gtTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCagag                                                                                 <  2:692564/221‑1 (MQ=255)
                                                                                                                                                                                                                                                               gtTGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCagag                                                                                 >  1:692564/1‑221 (MQ=255)
                                                                                                                                                                                                                                                                 tGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          <  1:1234177/194‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                          >  2:1234177/1‑194 (MQ=255)
                                                                                                                                                                                                                                                                 tGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCag                                                                                            <  2:342703/208‑2 (MQ=255)
                                                                                                                                                                                                                                                                 tGATCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCag                                                                                            >  1:342703/1‑207 (MQ=255)
                                                                                                                                                                                                                                                                   aTCGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaa         >  1:544000/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     cGCCCCGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaag        >  2:622419/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGTAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGCGTGACCATACATTGCGGACCAGCGGGAGCTTAAGGTCAGAATGCATAATCCGGCGCCCATCaggccaaggcc     >  2:233238/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATc                                                                                           <  1:1248286/203‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGagaag                                                                              <  1:1479867/216‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                   >  2:1663843/1‑243 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                   <  1:1663843/243‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaaggcc     >  2:173406/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       ccccGGAAGCATCAAACGAA‑GCCTGCGATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCACTGGCAGAGAAGAGAGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaaggcc     >  1:1018393/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
CGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACACGCCAGTGCGCCCCA‑GGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTA‑GCCTGGCTTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAG  >  CP042583/603790‑604343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A