Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 604,068 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583604,0680GC99.5% 507.2 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (126/90);  total (126/92)
Fisher's exact test for biased strand distribution p-value = 4.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583604,0690CG99.5% 510.6 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (126/91);  total (126/92)
Fisher's exact test for biased strand distribution p-value = 4.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
*CP042583604,0700TA99.5% 514.2 / ‑5.7 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (126/91);  minor base G (0/1);  total (126/92)
Fisher's exact test for biased strand distribution p-value = 4.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 218 total aligned reads displayed.

GCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTAGCCTGGC‑TTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAG  >  CP042583/603788‑604345
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                    
gCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTg                                                                                                                                                                                                                                                                                <  1:852586/289‑1 (MQ=255)
                             ccTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCa                                                                                                                                                                                                                                                  >  1:1224381/1‑289 (MQ=255)
                              cTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCAcgcccgc                                                                                                                                                                                                                                                    <  1:1587317/286‑1 (MQ=255)
                              cTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAg                                                                                                                                                                                                                                                 >  1:99070/1‑289 (MQ=255)
                              cTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAg                                                                                                                                                                                                                                                 >  2:1175898/1‑289 (MQ=255)
                               tACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGa                                                                                                                                                                                                                                                <  1:1383598/289‑1 (MQ=255)
                                       tgtgCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTcgc                                                                                                                                                                                                                                        >  1:234107/1‑289 (MQ=255)
                                         tgCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGa                                                                                                                                                                                                                                      >  2:821854/1‑289 (MQ=255)
                                          gCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGAt                                                                                                                                                                                                                                     <  1:1333455/289‑1 (MQ=255)
                                            aaaTTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATGAAGACTCCAGCGGCAGCGTGCGGTTTCTGAATTTCAGCGCCTTATACAGCCAAATCAGCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATAGGCATTGATGTAGTAGTTGATCGCCCCGGAGGCATCAAACGATGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATcg                                                                                                                                                                                                                                   <  2:789606/289‑1 (MQ=255)
                                                   aTAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGa                                                                                                                                                                                                                            <  1:337609/289‑1 (MQ=255)
                                                          gCAGGAATTACGTAGGCCTAATAGGAAGCGGCAAGCGTCGCATAAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCGGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATAGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAagcagc                                                                                                                                                                                                                     <  2:672015/289‑1 (MQ=255)
                                                               aagtgctgcggCCTGATAAGACGCGTAAAGCGTCGCATCAGGAATCGGTGCTTCCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACCGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAag                                                                                                                                                                                                                         <  2:1654686/271‑1 (MQ=255)
                                                                   cctgaGGCCTGCTAGGACGCATCAAGCGTGCCCTCAGGCATAGGTGCTGGCCTATTAAGACGCCAGCGCCAGGGCGCGGTTTCTGAATTTCGGGGCCTGCTACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATg                                                                                                                                                                                                            <  2:1551096/285‑1 (MQ=255)
                                                                   aCGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATg                                                                                                                                                                                                            <  1:1253517/289‑1 (MQ=255)
                                                                     gTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGcc                                                                                                                                                                                                          <  1:1489400/289‑1 (MQ=255)
                                                                        ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGAGGCCGGt                                                                                                                                                                                                       >  1:1155450/1‑289 (MQ=255)
                                                                           cTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTGCTGAATTTCAGCGCCTGATACCGCCAAATCATCAGTACCAGTCCTACACAA‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTa                                                                                                                                                                                                     <  2:1840515/288‑1 (MQ=255)
                                                                              aTAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAAACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGAAGCAGGTACATGCCGGCTAAtg                                                                                                                                                                                                  >  2:559122/1‑287 (MQ=255)
                                                                                   aCGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTgcgatgtc                                                                                                                                                                                                                                                                         <  2:1227612/213‑8 (MQ=255)
                                                                                    cgcgTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCgg                                                                                                                                                                                            <  1:1446874/288‑1 (MQ=255)
                                                                                               tCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGCTGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCTATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAACCAGCATGTAGATCACGGTTAATACGCCGGCCCCACCGGCGa                                                                                                                                                                                >  2:1338888/1‑289 (MQ=255)
                                                                                                  cATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGAtt                                                                                                                                                                              >  1:1826010/1‑288 (MQ=255)
                                                                                                           tCGGTGCTGGCCTATGAAGGGTCCAGAGCAAGTGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCTTCAGCACCAGGCCTACACCC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAGGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAGGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGcgcg                                                                                                                                                                    <  2:405466/289‑1 (MQ=255)
                                                                                                                 cTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAAtt                                                                                                                                                               <  2:124887/288‑1 (MQ=255)
                                                                                                                  tGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAAttt                                                                                                                                                              >  1:1313203/1‑288 (MQ=255)
                                                                                                                         ttAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTgcgacatg                                                                                                                                                      >  1:515910/1‑282 (MQ=255)
                                                                                                                              aCTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCaa                                                                                                                                                  >  1:1402142/1‑288 (MQ=255)
                                                                                                                               cTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAAc                                                                                                                                                 <  1:1803328/288‑1 (MQ=255)
                                                                                                                                  cagcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAAtt                                                                                                                                                               <  2:1028600/271‑1 (MQ=255)
                                                                                                                                  cagcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                             <  1:79140/289‑1 (MQ=255)
                                                                                                                                   agcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTgcgatgt                                                                                                                                                                                                                                                                          >  2:579343/1‑158 (MQ=255)
                                                                                                                                   agcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTgcgatgt                                                                                                                                                                                                                                                                          <  1:579343/164‑7 (MQ=255)
                                                                                                                                   agcgccagcgcGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATAc                                                                                                                                                                                                 <  1:637286/236‑1 (MQ=255)
                                                                                                                                              gctgTTTCTGAATTTCAGGCCCTGTTACAACCAAATCAGCAGGACCAGCCCTACACAC‑GCCAGTGCGCCCCATGTAATTTGATCAAATACTTCAATACATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGt                                                                                                                                 <  2:1224381/286‑1 (MQ=255)
                                                                                                                                                    tCTGAGTTGCCGCGCCTGATACAGGCAAATACTCAGTACCCGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTAAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCa                                                                                                                           <  2:771600/289‑1 (MQ=255)
                                                                                                                                                    tCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCa                                                                                                                           <  2:174346/289‑1 (MQ=255)
                                                                                                                                                    tCTAAATTCTAGAGCCTGAACCAGACAAAACATCAGTACCAGTCCTAC‑CACAGCCAGTGCGCCCCAGGTAATTTGATCAAATACTTAAATATATGCATTGATGGAGTAGTTGATCGACCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCa                                                                                                                           <  2:1402142/289‑1 (MQ=255)
                                                                                                                                                        aaTTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGc                                                                                                                       <  1:910766/289‑1 (MQ=255)
                                                                                                                                                                  ccTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCg                                                                                                              >  1:187538/1‑288 (MQ=255)
                                                                                                                                                                   cagATAAAGCCAAAAATTAAGTACAAGTGCTAAACAG‑GCCCGTGGGCCACGGGTAATTGGATCAAATACTTGAAGATAGGCATTGAGGGAGTAGTGGATAGCCACGCAAGCAACAAA‑CGAGGCCGGCGAGGTCGGATAGGCAATCACGCCAGCCAGATAGTTGGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                            <  2:1670309/287‑1 (MQ=255)
                                                                                                                                                                   cTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCGGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                            <  1:1725710/289‑1 (MQ=255)
                                                                                                                                                                   cTGATACAACACAATCCTCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAAATTGATCAAATACGTAAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                            <  2:628745/289‑1 (MQ=255)
                                                                                                                                                                          aGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCa                                                                                                                           >  1:426943/1‑267 (MQ=255)
                                                                                                                                                                            ccAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTaaa                                                                                                   >  1:1021430/1‑288 (MQ=255)
                                                                                                                                                                            ccAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAAt                                                                                                   >  2:1062174/1‑289 (MQ=255)
                                                                                                                                                                            ccAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAAt                                                                                                   >  1:1193078/1‑289 (MQ=255)
                                                                                                                                                                                atcatcAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCa                                                                                               >  1:1201172/1‑289 (MQ=255)
                                                                                                                                                                                  catcaGTACCCGTCCACCACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATc                                                                                             <  2:1879987/289‑1 (MQ=255)
                                                                                                                                                                                        tACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGc                                                                                       >  1:214891/1‑289 (MQ=255)
                                                                                                                                                                                         gccggtgctgcacag‑GGCAGTGGGGCCCAGGTAATTTGATCAAATACTTCAATCTATGCATGGGTGGAGTGGGGGTGCGCCCCGGAAGCATCAAACGAGGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGGGCCGGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTGACACCGGGGA‑TTCAATGCGCGTAATTTGCGACATGGCAACCGGGGCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCag                                                                                     <  2:1044824/279‑1 (MQ=255)
                                                                                                                                                                                             gTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAgaga                                                                                  >  1:148677/1‑289 (MQ=255)
                                                                                                                                                                                                 tACACAC‑GCCAGTGAGCCCCAGGTAATTTGACAAAATACTTCAATAGAGGCATTGATGGAGTAGTTGACCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                              <  2:1624102/289‑1 (MQ=255)
                                                                                                                                                                                                  acacac‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTg                                                                                         >  1:1765550/1‑277 (MQ=255)
                                                                                                                                                                                                  acacac‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGt                                                                             >  1:1577704/1‑289 (MQ=255)
                                                                                                                                                                                                   gaaagagCCAGTGCGCCCCAGTTAATTTGATAAAATCATTCACTATATGCATTGATGGATTAGTTGCTCCCCCCGGACGCATCCAACGACGCCTCCG‑ATGTCTGCTCGGCAACCCCGCCCGCAAGCTCGTTCACAATCGCGCCACACAGCAGCATGTAGATGCCGGTTAATCCGCCGGTCACACCGGCGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                              <  2:797710/282‑1 (MQ=255)
                                                                                                                                                                                                    acac‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGa                                                                           <  1:1634173/289‑1 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCTCAATACCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGATGGACCAt                                                                       >  1:97132/1‑289 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGGAGCTGGACCAt                                                                       >  2:1488907/1‑289 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGa                                                                           <  2:1299281/285‑1 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGa                                                                           >  1:1299281/1‑285 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGAccct                                                                       >  2:1293971/1‑287 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                       >  1:1156837/1‑289 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                       >  2:754882/1‑289 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                       >  2:1827764/1‑289 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCAt                                                                       >  1:320766/1‑289 (MQ=255)
                                                                                                                                                                                                         gCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACAGCCAGGCCCAATTCCAACAGGGGCAGAGAAGAGTGACCac                                                                       >  2:442978/1‑288 (MQ=255)
                                                                                                                                                                                                                   cccAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTGGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGGGGCAGCGAAGACGGACCAAACAATGCgg                                                              >  2:180909/1‑288 (MQ=255)
                                                                                                                                                                                                                   cccAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTCATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCCGAGAAGAGTGACcacaca                                                                    >  1:797710/1‑282 (MQ=255)
                                                                                                                                                                                                                   cccAGGTAATTGGATCAAATACTTCAATAGATGCATTGATGGAGGAGTTGATCGCCCCGGAAGCATCAAACGAGGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGa                                                             <  2:509522/289‑1 (MQ=255)
                                                                                                                                                                                                                           aTTTGATCAAATACTTCAATATATGCATTGATGGAGTGGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                     <  1:180909/289‑1 (MQ=255)
                                                                                                                                                                                                                           aTTTGATCAAAAACTTCAATATATGCGTTGAGGGAGTAGTTGAGCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGGCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                     <  2:989775/289‑1 (MQ=255)
                                                                                                                                                                                                                            tttGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGgc                                                    >  1:370020/1‑289 (MQ=255)
                                                                                                                                                                                                                             ttGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                             >  2:1687703/1‑199 (MQ=255)
                                                                                                                                                                                                                             ttGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCggg                                                                                                                                             <  1:1687703/199‑1 (MQ=255)
                                                                                                                                                                                                                                aTCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCtt                                                >  2:1902310/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aCTTCAATAGATGCCGTGATGGAGTAGTTGAGCCCCCCGGCAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCa                                         <  2:712099/289‑1 (MQ=255)
                                                                                                                                                                                                                                          tCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGaa                                      >  2:1786479/1‑289 (MQ=255)
                                                                                                                                                                                                                                              tatatGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGcc                                                                                                            >  1:486088/1‑215 (MQ=255)
                                                                                                                                                                                                                                                   gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCACAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGACGAGTGAACATACATTGCGGACCAGCGGGCGCTTAAGGt                                           >  1:1342045/1‑275 (MQ=255)
                                                                                                                                                                                                                                                   gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCggg                                                     >  2:1323055/1‑265 (MQ=255)
                                                                                                                                                                                                                                                   gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAAt                              >  1:539992/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   gCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAAt                              >  2:309584/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    cATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATc                             <  1:1293971/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       tGATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgc                         >  1:1232189/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        gagggAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgcg                        <  1:664280/286‑1 (MQ=255)
                                                                                                                                                                                                                                                        gATGGAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGgc                         >  1:1889024/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            gAGTAGTTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCTGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTTCGCAAAGCCCAGCCACGCCAGGCATAATACCATAAGTGGCAGAGAACAGTGACCAACAATTGCGGATCTGCGGGCCCTTAAGGCTGAAATGCACAATCCgtctcgca                    >  2:93548/1‑282 (MQ=255)
                                                                                                                                                                                                                                                             agtagtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGCAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGGGCtga                    >  2:1459122/1‑286 (MQ=255)
                                                                                                                                                                                                                                                              gtagtTGATCGCCCCGGAAGCATCAAACGAAGCGTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGGTAGTTCGCGATCGCGCCAGAAAGCAGCACGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCTCTTAAGGTCAGAATGCAGAATCCGGCGCtcat                   <  1:557999/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               tagtTGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCtcatca                 >  1:785295/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   tGATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGAAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggcc             >  2:546169/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    gATCGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggcca            >  1:278575/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       cGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaag          >  1:735622/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       cGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaag          >  1:262701/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       cGCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCACAGGGCGCATAGGGTCAGAATGCAGACTCCGGCGCCCCTCacgccaag          >  2:1435733/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        gCCCCGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                              >  2:254371/1‑219 (MQ=255)
                                                                                                                                                                                                                                                                         ccccGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCaggccaaggcc       >  1:1362414/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            cGGAAGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAagag                                                                              <  2:660987/215‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aaGCATCAAACGAAGCCTGCG‑ATGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGCGACATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAagag  <  2:335867/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                    
GCCGGATGCGGCGTGAACGCCTTATCCAGCCTACAAATTTGTGCAAATTCAATAAATTGCAGGAAATACGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATCGGTGCTGGCCTATTAAGACTCCAGCGCCAGCGCGCGGTTTCTGAATTTCAGCGCCTGATACAGCCAAATCATCAGTACCAGTCCTACACAC‑GCCAGTGCGCCCCAGGTAATTTGATCAAATACTTCAATATATGCATTGATGGAGTAGTTGATCGCCCCGGAAGCATCAAAGCTAGCCTGGC‑TTGTCTGATCGGCAATCACGCCCGCCAGATAGTTCGCGATCGCGCCAGAAAGCAGCATGTAGATGCCGGTTAATACGCCGGTCACACCGGGGATTTCAATGCGCGTAATTTGGCTCATGGCAACCGGGTCGATAAACAGTTCCGCAAAGCCCATCACCGCCAGGCCTAATACCATCAGTGGCAGAGAAGAGTGACCATACATTGCGGACCAGCGGGCGCTTAAGGTCAGAATGCAGAATCCGGCGCTCATCAGGCCAAGGCCAAGAG  >  CP042583/603788‑604345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A