Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,920,363 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,920,3630GC99.5% 483.0 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (110/99);  total (110/100)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,920,3640CG99.0% 482.7 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (109/98);  minor base A (1/1);  total (110/100)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,920,3650TA98.1% 469.2 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/2);  major base A (106/97);  minor base C (4/0);  total (110/100)
Fisher's exact test for biased strand distribution p-value = 1.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 210 total aligned reads displayed.

ATGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGGCTTACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCA  >  CP042583/1920085‑1920640
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                   
      tagtaATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATTCTgg                                                                                                                                                                                                                                                                        >  1:1801472/1‑288 (MQ=255)
      tagtaATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCt                                                                                                                                                                                                                                                                          <  1:1623591/286‑1 (MQ=255)
      tagtaATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CCCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCt                                                                                                                                                                                                                                                                          >  2:1623591/1‑286 (MQ=255)
          aaTACGCTTTCACCTGCTGCCAGTCCGCTTTAGGGATTGGCTACAGATATTTATCCAGCTGGCGGAAGTCATGATTAAGCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATa                                                                                                                                                                                                                                                                   <  2:1969477/289‑1 (MQ=255)
          aaTACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATg                                                                                                                                                                                                                                                                            >  1:744223/1‑280 (MQ=255)
              cGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAg                                                                                                                                                                                                                                                               >  1:1562252/1‑289 (MQ=255)
               gCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCATGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCTAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAGGGCGATACTGCATGCTGGGCATACCAGt                                                                                                                                                                                                                                                              <  1:1864812/289‑1 (MQ=255)
                  ttCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCa                                                                                                                                                                                                                                                            >  2:1652144/1‑288 (MQ=255)
                     cccTGCCCCCAGGCAGCTTTGGGACTTGGCTCAAGATATTTTACCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCaa                                                                                                                                                                                                                                                        <  2:1532522/288‑1 (MQ=255)
                     aCCTGCGCCCAGTGCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCaa                                                                                                                                                                                                                                                        <  2:2228296/289‑1 (MQ=255)
                          cTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCtg                                                                                                                                                                                                                                                   >  1:1649172/1‑289 (MQ=255)
                             ccAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCtgatg                                                                                                                                                                                                                                                <  1:843117/289‑1 (MQ=255)
                                  ccGGTTTGGGGATTGGCTCCAGATATTTTTCCAGCGGGCGGAAGTCGTGATTAATCGCGTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAAcc                                                                                                                                                                                                                                            <  1:1758167/288‑1 (MQ=255)
                                   cGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAAccc                                                                                                                                                                                                                                           >  1:352610/1‑288 (MQ=255)
                                     cTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACTCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAACAATGCTGATGAACCCCg                                                                                                                                                                                                                                         >  2:7857/1‑288 (MQ=255)
                                     cTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCCCTTCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGCCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCg                                                                                                                                                                                                                                         >  2:1388034/1‑288 (MQ=255)
                                     cTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCg                                                                                                                                                                                                                                         >  1:1400318/1‑288 (MQ=255)
                                      tttGGGGATTGCTTCCCGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTACCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGcc                                                                                                                                                                                                                                       <  2:2242814/289‑1 (MQ=255)
                                       ttGGGGTTTGGCTCCAGTTTTTTTCCCAGCTGGCGAAAGTCATGTTTAATCGCTTTATCGCGCCGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCa                                                                                                                                                                                                                                      <  1:2198118/289‑1 (MQ=255)
                                               tGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCa                                                                                                                                                                                                                              >  2:1845162/1‑289 (MQ=255)
                                               tGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCa                                                                                                                                                                                                                              <  1:1727304/289‑1 (MQ=255)
                                                              ttCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAGCATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCt                                                                                                                                                                                                               <  1:2183579/289‑1 (MQ=255)
                                                                   gCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGCCGATTAATGCTATGCATTTTCTTAAACGCCCG‑CGCCACTGCTTTCAACATGGCTTGCCGTAATTCGTCAGAATAAGGCGCTACTGCATGCTGGGCATACCAGTCAGCCATGCTGATAAACGCCGCCATCTCTGCAGTCACCAGCAACCCACGcc                                                                                                                                                                                                           >  2:2080879/1‑288 (MQ=255)
                                                                      ggCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCAtt                                                                                                                                                                                                        <  2:314432/288‑1 (MQ=255)
                                                                       gCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGGCGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTc                                                                                                                                                                                                       <  1:956834/288‑1 (MQ=255)
                                                                           aaGTCCTGATTCATCGCTTTAACGGGACGCAAGCGGCGCCGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCGGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCAccc                                                                                                                                                                                                   <  2:2214025/288‑1 (MQ=255)
                                                                           aaGTCATGTTTAATCGCTTAATCGGGACGCACGGGGCGACGACTTTTCTCAAGGTCAAGAAAACCAGCTTCTCCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCAccc                                                                                                                                                                                                   <  2:1686750/288‑1 (MQ=255)
                                                                            tgacaggATTAATCGTTTCAGCGAGACGCAGGCGGCGACGACTTTTCGCCAGATCAAGAACACCAGCTTCTGCATTACCTTCTGTTTAAACATAGATATGGCAAACACACCAACACCAATGCTGATGATTAATGTTATGCATTTTCTTAAACGCCAG‑CGCCGCTGTTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCGGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCt                                                                                                                                                                                                  <  2:491413/282‑1 (MQ=255)
                                                                                       aTCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAAAAGCCATTCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATTCTGATGAAACCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCAcc                                                                                                                                                                                       >  1:1337519/1‑288 (MQ=255)
                                                                                              tATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATTAACCCCGCCATATCTTCAGTCACCCGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCAc                                                                                                                                                                                >  2:1067474/1‑288 (MQ=255)
                                                                                                   cgACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCaaaa                                                                                                                                                                           >  1:739358/1‑288 (MQ=255)
                                                                                                        cAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGa                                                                                                                                                                       >  1:478088/1‑287 (MQ=255)
                                                                                                          aGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATa                                                                                                                                                                                                                                                                   >  2:1173520/1‑193 (MQ=255)
                                                                                                             ggcgACGACTTTTCTCCAGGTAAAGAAAACCAGCTCCTGCATTTCCTTCTGTTTTACAATAGATATGGCGAACATACCAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAACCGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCgg                                                                                                                                                                <  2:1397365/289‑1 (MQ=255)
                                                                                                                  cgacTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGa                                                                                                                                                           <  1:1152259/289‑1 (MQ=255)
                                                                                                                             cAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCgg                                                                                                                                                                <  1:1187892/273‑1 (MQ=255)
                                                                                                                             cAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGcc                                                                                                                                                <  1:1061389/289‑1 (MQ=255)
                                                                                                                             aaGGTAAAGAAAACCAGCTTCTGCATTACCTGCTGTTTTCACATATATATGGCGAAAATAACACCGGCCATGCTGACGATTATTGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAGGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGACCCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGcc                                                                                                                                                <  2:1562252/288‑1 (MQ=255)
                                                                                                                                  cAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTc                                                                                                                                           <  2:2186225/289‑1 (MQ=255)
                                                                                                                                    aGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCa                                                                                                                                                              >  1:301257/1‑268 (MQ=255)
                                                                                                                                          ccAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCtt                                                                                                                                   >  2:1111734/1‑289 (MQ=255)
                                                                                                                                                     aTTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCa                                                                                                                        <  1:1111734/289‑1 (MQ=255)
                                                                                                                                                              tGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATCTCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGACGACACCGGCCCGTTCCAGCTCTTTAATTACCGCAACCTCAAgg                                                                                                               >  1:2085629/1‑289 (MQ=255)
                                                                                                                                                              tGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACgg                                                                                                               >  2:59977/1‑289 (MQ=255)
                                                                                                                                                               gTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAACCGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCTATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGa                                                                                                              <  1:1517681/289‑1 (MQ=255)
                                                                                                                                                               gTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGa                                                                                                              <  1:799992/289‑1 (MQ=255)
                                                                                                                                                               gTTTTCACATAAATATGGCGAACATAACACCAGCCATGCTGACGATGAAGGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTGCAACAGGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGa                                                                                                              <  2:1520468/289‑1 (MQ=255)
                                                                                                                                                               gTTTTCAAATAGAAATGGCTAACATAACAACAGCCAGGCTACCGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGa                                                                                                              <  2:159682/289‑1 (MQ=255)
                                                                                                                                                                ttttCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGAc                                                                                                             >  1:1130672/1‑289 (MQ=255)
                                                                                                                                                                   tCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCgg                                                                                                                                                                >  2:415139/1‑235 (MQ=255)
                                                                                                                                                                   tCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGt                                                                                                                                       <  1:1098907/260‑1 (MQ=255)
                                                                                                                                                                           atatGGCGAAAATAACAACGGCCATGCTAACGATTAATGCTATGCATTTTCTTAACCGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGAAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGa                                                                                                                                                           <  2:1875381/232‑1 (MQ=255)
                                                                                                                                                                              tGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGc                                                                                               <  1:466956/289‑1 (MQ=255)
                                                                                                                                                                               ggCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGCTACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCACGCCATATCTTCAGTCAACAGCAACGCTAGCCATTCCCCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTCATTACCGCACCCTCACGGACAATCGTCGGTCGGcc                                                                                              >  2:46800/1‑289 (MQ=255)
                                                                                                                                                                               ggCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGcc                                                                                              >  1:104627/1‑289 (MQ=255)
                                                                                                                                                                               ggCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGcc                                                                                              >  1:72756/1‑289 (MQ=255)
                                                                                                                                                                                   aaCATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAAc                                                                                          >  2:2001701/1‑289 (MQ=255)
                                                                                                                                                                                   aaCATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAAc                                                                                          >  1:818847/1‑289 (MQ=255)
                                                                                                                                                                                     cATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCCCGGa                                                                                                              >  1:1851385/1‑267 (MQ=255)
                                                                                                                                                                                     cATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACgg                                                                                        >  2:1010876/1‑289 (MQ=255)
                                                                                                                                                                                     cATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGAACTTCGACACGAAGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCCAGGAACATCGTTCAGCGGCCGAACgt                                                                                        >  2:1437901/1‑288 (MQ=255)
                                                                                                                                                                                      aTAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGa                                                                                       >  2:2093999/1‑289 (MQ=255)
                                                                                                                                                                                             caGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGGCGGCCGAACGGAGAACGt                                                                                 >  1:1268018/1‑288 (MQ=255)
                                                                                                                                                                                               gCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACg                                                                              >  1:1213582/1‑289 (MQ=255)
                                                                                                                                                                                                ccATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACgg                                                                             >  2:555644/1‑289 (MQ=255)
                                                                                                                                                                                                ccATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACGGACAATCGGTGGTCGGCCGAACGGATAACGTACgg                                                                             >  2:1478034/1‑289 (MQ=255)
                                                                                                                                                                                                 cATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCACCATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCACACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTa                                                                                <  1:1374071/285‑1 (MQ=255)
                                                                                                                                                                                                 cATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTTACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTa                                                                                <  1:1606172/285‑1 (MQ=255)
                                                                                                                                                                                                 cATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTa                                                                                <  1:2093999/285‑1 (MQ=255)
                                                                                                                                                                                                 cATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTa                                                                                <  1:1010876/285‑1 (MQ=255)
                                                                                                                                                                                                 cATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGa                                                                            <  1:977776/289‑1 (MQ=255)
                                                                                                                                                                                                          gATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGa                                                                                                              <  2:674292/246‑1 (MQ=255)
                                                                                                                                                                                                          gATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAg                                                                   >  1:1274211/1‑289 (MQ=255)
                                                                                                                                                                                                            ttAATCCTATGCGTTTTCTTAAGCGCCAG‑GCCCGCTGCTCTAAGACTGGAGTACCGTACTCCGTCAGAATAATGGGATAAGGCAGGCGGAGCATACCAGTCGGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGAGGACACCGGGCCGTTCCAGTTCTTTAATTACCTCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATTAAACAgat                                                                 <  2:1330875/289‑1 (MQ=255)
                                                                                                                                                                                                             tAATCCTTTGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCACCATGGCTTCCCTTACGTCGTCAGAATAAGGCGTTACTGCATGCTGGGCAAACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAgatg                                                                <  2:1225678/289‑1 (MQ=255)
                                                                                                                                                                                                               aTGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTGGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAgatgat                                                              <  1:1067063/289‑1 (MQ=255)
                                                                                                                                                                                                                    aTGCATTTTCTTAACCGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTc                                                         <  1:2032326/289‑1 (MQ=255)
                                                                                                                                                                                                                    aTGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCCACCTCAAGGACAATCGTTGGTAGGACGAACGGATAACGTACGGAATGAAACAGATGATGCGTc                                                         >  1:838208/1‑289 (MQ=255)
                                                                                                                                                                                                                    aTGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTc                                                         >  1:412342/1‑289 (MQ=255)
                                                                                                                                                                                                                    aTGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTc                                                         >  1:2117620/1‑289 (MQ=255)
                                                                                                                                                                                                                    aTGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAAATGCTGCGTc                                                         >  1:1428449/1‑289 (MQ=255)
                                                                                                                                                                                                                    aTGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCCCCATATCCTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCTAAAACGATCTTCGGCACGATGACACCGGCCCGTTCTAGTTCTGTAATTACCGCAAGCCCCCGGAAAATCGCTGGTCGGCCGAACGGCTAACGTACGGACTGAACGAGATGATACgcc                                                         >  2:263725/1‑287 (MQ=255)
                                                                                                                                                                                                                     tGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCa                                                        >  1:2038005/1‑289 (MQ=255)
                                                                                                                                                                                                                     agCATTTTCTTAACCGCCAC‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCa                                                        <  1:1540004/288‑1 (MQ=255)
                                                                                                                                                                                                                       cATTTTTTTAAACGCCAG‑CCACCCTGCTTTCAACATGGCTTCCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCAt                                                       <  2:1027105/288‑1 (MQ=255)
                                                                                                                                                                                                                          tttCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCCCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGCACCAGATGATGCGTCATgcg                                                    >  2:258405/1‑288 (MQ=255)
                                                                                                                                                                                                                            tCTTACACACCAGACCCCACTGCTTCAAACATGTGTTGCCGTCATTCGGCAGAATAAGGCGATAATGCATGCTGGGAATACCCGTCAGCAATGCTGATCAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCt                                                  <  2:1727462/289‑1 (MQ=255)
                                                                                                                                                                                                                                  aCGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTtacata                                           <  1:59977/289‑1 (MQ=255)
                                                                                                                                                                                                                                        g‑cgcCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCtt                                     >  1:641902/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           tGGCTTGCCGTACTTCGTCAGAATAAGCCGTTACGGCATGCGGGGCATACCAGTCAGAAATGCTGATGACCCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGAc                   <  2:1361491/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ggCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGAc                   >  1:534777/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            ggCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGAc                   >  1:2066190/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            ggCTTGCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGAATCGTCAAGCCCTTTTCAGACAACTTTTTTCCATTTCCCTAGAc                   >  2:709047/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             ggttGCCGTACTTGCTAAAAATAAGGCCATACTGCATGCTGGCCATACCAGTCAGCAATGCTGATGACCCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGc                 <  2:1272561/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gCCGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCGTTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGAc                   <  1:2255436/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cGTACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGc            >  1:914646/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     tagttCGTCGGAATAACGCGGTACTGCATCCTGGGCATACCAGTCAGCAATGTTAATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCATCCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCAc          <  1:1913330/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tACTTCGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCAcc         <  2:739358/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCa                                                                                                                  <  1:1715133/179‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cGTCAGAATAAGGCGATACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGc     >  1:1232689/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                   
ATGGCGTAGTAATACGCTTTCACCTGCTCCCAGTCCGCTTTGGGGATTGGCTCCAGATATTTTTCCAGCTGGCGGAAGTCATGATTAATCGCTTTATCGCGACGCAAGCGGCGACGACTTTTCTCCAGGTCAAGAAAACCAGCTTCTGCATTACCTTCTGTTTTCACATAGATATGGCGAACATAACAACAGCCATGCTGACGATTAATGCTATGCATTTTCTTAAACGCCAG‑CGCCACTGCTTTCAACATGGCTTGCCGTACTTCGTCAGAATAAGGGCTTACTGCATGCTGGGCATACCAGTCAGCAATGCTGATGAACCCCGCCATATCTTCAGTCACCAGCAACGCTCGCCATTCACCCTCAATTTTCACCGCTTCACCAAAAACGATCTTCGGCACGATGACACCGGCCCGTTCCAGTTCTTTAATTACCGCAACCTCACGGACAATCGTTGGTCGGCCGAACGGATAACGTACGGAATGAAACAGATGATGCGTCATGCGCTTTACATACAGCTTTTTGCCGTTGCGCTCGACGCATTGCACCCCGCTCA  >  CP042583/1920085‑1920640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A