Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
559,765 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 559,765 | 0 | A | T | 98.4%
| 428.3
/ NA
| 186 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (100/82); minor base G (0/3); total (101/85) |
| Fisher's exact test for biased strand distribution p-value = 9.51e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 559,766 | 0 | C | G | 99.5%
| 431.5
/ NA
| 186 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (101/83); minor base A (0/1); total (101/85) |
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 559,767 | 0 | T | A | 98.4%
| 422.8
/ NA
| 186 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (98/82); minor base C (2/1); total (101/85) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 187 total aligned reads displayed.
TCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATACCAGGTA > CP042583/559483‑560041
|||
gacccGACGACCAGATATGGCAGGGAAGGGACCAGTGACCTCAAGTCAAACTCTAACATCATTCTCCACCCATGTGGCAAGGCAGTCGACCTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATGGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg < 2:1311946/287‑1 (MQ=255)
ccGTCGAGAAATAATGGCAGGGAAGGGACAATGGAACTCCATTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg < 2:1194302/286‑1 (MQ=255)
cGTCGAGCAGATATGTCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggg > 1:700660/1‑289 (MQ=255)
gTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggg > 1:1052667/1‑288 (MQ=255)
gTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGa < 1:1583315/289‑1 (MQ=255)
tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggggc > 2:163079/1‑287 (MQ=255)
tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGat > 1:1319677/1‑288 (MQ=255)
tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAc > 1:100564/1‑289 (MQ=255)
tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAc > 1:272377/1‑289 (MQ=255)
atatGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAcgc > 1:355654/1‑289 (MQ=255)
tatGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAc < 1:1562214/286‑1 (MQ=255)
aatGGCAGGAAGGGGACAAGGGAACCCCAGTCAACCCCGTACATTAGTTCCCCCCCATGTTGCCGGGCAGGCGAACTTTACGTTCAACCGGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATC‑CGCCAGCGTAATGGCGGTAAACGCCGCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAcg < 2:464605/286‑1 (MQ=255)
tGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑t < 2:390279/289‑1 (MQ=255)
tGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑t < 1:1701402/289‑1 (MQ=255)
ggaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGCTAAAAGCGTTAATCAACACATA‑CGCCAGCGGAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGACGGCGGAGTTTTTCACCAGGTTCAGCCTCTCAGACGTCAGCGCCGGGACGGCAACGCGA‑TGAGCAt > 2:1548873/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGGCGCAAACCCGG‑TAAGccat > 2:1488364/1‑286 (MQ=255)
aagggaCAATGGAACCCCAGTCAAACTCAGACATTATTTGCCACCCATGTTGCCAGGGAGTCGACCTTTACGTTCAACCTGCGTCATAACCAGAATGATAAAAGCGTTAATCAACACTTA‑CGCCGGCGTATTGGCGGTAAACGACTCCCAGGCATGGGCGAAGTAAGCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTa < 2:2952/289‑1 (MQ=255)
agggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTa < 1:263601/288‑1 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGt > 1:489225/1‑289 (MQ=255)
cTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACCGTAAACCGA‑TAAACATTAggaacaacgtacaa > 2:1234861/1‑277 (MQ=255)
gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTAt > 1:1538538/1‑285 (MQ=255)
gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGAt > 1:278661/1‑289 (MQ=255)
acgttagtTCCCCCCCAAGTTGCCAGGCAGACGAACTTTACGTTCAACCAACTTCATCACCAGCATGACAAAAGCGTTAATAAACACATA‑CACCAGCGTAATGGCGGTAAACGACTCCCAGCCATGGGCTGAGGAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCCCCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGt < 1:1842848/286‑1 (MQ=255)
tattTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGAGAAACCTGCGGTcgcg > 2:822382/1‑289 (MQ=255)
attTCCCCCCCATGGTGCCAGGCACGCAAACTATCCGTTAACCCAGCGTCATCACCAGACTGAAAAAAGAGTAACTCAACACATA‑CGCCAGCTTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTa < 2:1162671/285‑1 (MQ=255)
ttGCCCCCCAGGTTGCCGGGCAGGCGAACTTTCCGTTAAACCAGCGTCAACACAAGCATAAAAAAACCGTTAATCAACCAATA‑CGCCAGCGTAATGGCGGTAAACGACCCCCGGCAATGGGCTGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCa < 2:1583075/289‑1 (MQ=255)
cccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGCCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGG‑TAAGCATTAGGCAGCAGTACGGAACGATAAGCCGGCGGTAGCGTCGGGc > 2:239043/1‑288 (MQ=255)
ccccATGTTGCCAGGAAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGccc < 2:489225/289‑1 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTc > 2:252165/1‑281 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTc < 1:252165/281‑1 (MQ=255)
aTGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATc > 1:722463/1‑288 (MQ=255)
ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGcgcg > 1:753397/1‑288 (MQ=255)
ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCgg > 2:755966/1‑289 (MQ=255)
ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTAACGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGcgcg > 1:1863437/1‑288 (MQ=255)
gcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGACCGCGCgg > 1:1562387/1‑288 (MQ=255)
gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTACTCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGACAACCCGACTACGCGTTGGACA‑CAGTCACAATCGATAAGGCTGCGGTTACGTCAGGCCCACCGCCCGCCCgggcttt > 2:1243011/1‑284 (MQ=255)
gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGGACCGACAAGCCTGCGGGAGCGTCAAGCCCAACCGCAACGCGG‑CAttt > 2:638047/1‑289 (MQ=255)
cGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGAGGTAGCGTCAgg > 1:608695/1‑258 (MQ=255)
aaCCAGCGTAATACCCGGAAATATAAAAGCGTTAA‑CAAAACATACCGCCAGCGTAATGGCGGTAACCGACCCCCAGGCAGGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGc < 2:133603/289‑1 (MQ=255)
aCCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCa > 1:1740409/1‑289 (MQ=255)
acaaGCATGATAAAAGCGTTACTAAACACATA‑AGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCGGAGTAATCGAGCAATTTACCCGCCTGAGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATcg < 2:355654/286‑1 (MQ=255)
aGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCCGCCAGCCCATCCCCAGCCGGG‑CATTTTTTTG‑CCCCCCCGGCAGCGACGGAATCgcgg > 2:212196/1‑289 (MQ=255)
cATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTT‑CCCTCGCGGCAGCGACTGAATCgcggcg > 1:88334/1‑289 (MQ=255)
aTAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGt > 1:1599246/1‑288 (MQ=255)
aTAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAAGATAACGCGA‑TAAGCATTAGGCCGCAGTACGTAACGATAAGCCTGCGGTAGCGGCAGGCCCATTGCCAGCGAGG‑CCTTTTTTTG‑CCCTCCGGGCCGCGACTGAATCGCCGCGCGt > 2:52850/1‑288 (MQ=255)
cacaTA‑CGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACgg > 1:1459760/1‑289 (MQ=255)
acaAA‑CGCCAGCGTAGTGGCGGTAAACGACCCCCAGGAATGGGCTGGTTAACCAGGCAATTACCCCGCCTGGCCCGCCATAGCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACggg < 2:88334/289‑1 (MQ=255)
cGCCAGCGTAATGGCGTTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGgcggcg < 1:52850/289‑1 (MQ=255)
cGCCAGCGTAATGCGGGTAAAGGACTCCCCGGCAGGGGCTGAGTACTCGGGCAATTGACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGgcggcg < 2:1773945/289‑1 (MQ=255)
aGCGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCCA‑TAAACAGTAGGCAGCAGTACGTATCGATAATCCTGCGGTAACGGCAAGCCCCACTCCCGCCTGGACATTTTTTGC‑CCCACGC‑GCACACACGAAATCGCGCCGCGTTCCCGTTC‑CCACAAACCggcgtcagca > 2:1111968/1‑282 (MQ=255)
gggaaTGGCGGTAAACGACTCCCGGGCATGGGCTGGGTAATCGGGGAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGGGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGTGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑aaa < 1:1095988/285‑1 (MQ=255)
cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAACGCGA‑TAAGCATTAGGCAGCAGTACGTAACGATAAGCCGGCGGTAGCGGCAGGCCCATCGCCAGGGCGG‑GATTTTTTTGCCCCTCG‑GGCCGCGGCTGGATCGCGGCGGGGACCTGTTCGGCAAACA‑GGGcggcgggacac > 2:500003/1‑284 (MQ=255)
cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAAc > 1:931570/1‑289 (MQ=255)
cGTAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAAc > 1:1146689/1‑289 (MQ=255)
tAATGGCGGTAAACGACTCCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACa > 1:805957/1‑288 (MQ=255)
gtaaacgactcCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGC‑TAAGCATTAGGACGCAGTACGTAGCGATAAGCCCTCGGTAGAGTCAGGCCCATCGCCAGCTCGG‑CATTCTTCTG‑CCCTAGCGGCAGCACCTGAATCTCGGCGCGCACCTGTTC‑GGACACACGGGCGGCAGTCACACA‑CCCCAGGc > 2:224994/9‑289 (MQ=255)
gtaaacgactcCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTTTCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGc > 1:1373347/9‑289 (MQ=255)
aaacgactcCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCa < 1:239043/282‑1 (MQ=255)
ctcCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATg > 1:1532230/1‑289 (MQ=255)
ctcCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGAACAGCCTGCTGTAGCGTCAGGCCCCTCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTCCCCGTTC‑GCAAACACGGGCGGGCGT‑GACAAGCCCCAGGCAGAGccgg > 2:1907305/1‑286 (MQ=255)
ccAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGG‑AAACAGCCCCAGGCAGAGCATGGat > 1:461757/1‑288 (MQ=255)
gCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCa < 1:742004/280‑1 (MQ=255)
gagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACt < 1:427347/287‑1 (MQ=255)
gagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACt < 1:1733172/287‑1 (MQ=255)
agTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑TCAAACCCGGGGGGCGGT‑AAACAGCCCCCGGCAGCGCATgggtgaaag > 2:742004/2‑273 (MQ=255)
gTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGa > 1:417735/1‑289 (MQ=255)
tCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAatat < 1:1907305/289‑1 (MQ=255)
cAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGcc < 2:914295/248‑1 (MQ=255)
cAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGcc > 1:914295/1‑248 (MQ=255)
cccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt < 2:805957/289‑1 (MQ=255)
gCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCgg < 1:33023/289‑1 (MQ=255)
ccTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑aaa > 2:1876234/1‑232 (MQ=255)
cTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGcc < 1:660861/289‑1 (MQ=255)
cgccgcCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAgg > 2:696663/1‑238 (MQ=255)
cgccgcCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAgg < 1:696663/238‑1 (MQ=255)
accaGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCCGT‑AAACCGCCCCCGGCAGAGCATGGATGAAAGGAAAAACTGAACATTTGGATCCAGCCCGGCCCTAAACCACATTccaa > 2:1049043/1‑287 (MQ=255)
caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCCGCGCCTGAATCGCGGCGCGGACCTGTTC‑GCAAACCCGGGCGGCCGG‑AAACCGCCCCAAGCCGACGACGGTTGAAAGGAAAAACGGAAACATTGGCTGCAGCCCGGCCCTCAAcccacagcccaat > 2:1473654/1‑278 (MQ=255)
caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACggg < 2:578240/203‑1 (MQ=255)
caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATACAGCTCGGCCCTAAACCACATGCCGAtt > 1:784148/1‑289 (MQ=255)
caGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACCGAATATTTGGAACCAGCTCGGCCTTAAACCAAATGCCGAtt > 2:492367/1‑289 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGAttt > 1:314646/1‑287 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACAAGCCGAttt > 1:12528/1‑287 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCACCTTGGCCTTAAACCACATGCCGAtttt > 1:1445281/1‑288 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAAAACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATACAGCTCGGCCTTAAACCACATGCCGAttg > 1:956239/1‑286 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCCGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAACCCACATGCCGAtttt > 2:596723/1‑288 (MQ=255)
cGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTtct > 1:1280666/1‑288 (MQ=255)
cGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTtct > 1:1002911/1‑288 (MQ=255)
atagtcgaggCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCg > 1:1273609/9‑289 (MQ=255)
cgaggCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGgcag < 2:417735/285‑1 (MQ=255)
gaggCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCCTGGATGAAAGGAAAAACCGAATATTGGGAACCAGCTCGGCCTTAAACCACATGCCGATATTCCCCGgccgc > 2:674927/3‑288 (MQ=255)
ggCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGTCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGcagcag > 1:443069/1‑288 (MQ=255)
ggCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCggg > 1:967748/1‑289 (MQ=255)
cGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGa < 2:1273609/288‑1 (MQ=255)
ggAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGTAt < 2:700660/288‑1 (MQ=255)
ggAGTTTTTACGCAGGTTATTCATCGCTAGGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGAt < 2:1536222/288‑1 (MQ=255)
tttttCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt > 1:380534/1‑238 (MQ=255)
tCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATa < 1:1644819/289‑1 (MQ=255)
tCACCAGGTTCATCAGCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATa < 1:1617440/289‑1 (MQ=255)
aCCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATAcc < 1:1637988/289‑1 (MQ=255)
aCCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATAcc < 1:1234861/289‑1 (MQ=255)
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TCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATA‑CGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAACGCGA‑TAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGG‑CATTTTTTTG‑CCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTC‑GCAAACACGGGCGGCGGT‑AAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATACCAGGTA > CP042583/559483‑560041
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
