Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
559,765 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 559,765 | 0 | A | T | 99.4%
| 417.3
/ NA
| 181 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (101/78); minor base C (1/0); total (102/79) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
| * | CP042583 | 559,766 | 0 | C | G | 100.0%
| 422.0
/ NA
| 181 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (102/79); total (102/79) |
| * | CP042583 | 559,767 | 0 | T | A | 98.3%
| 415.0
/ NA
| 181 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (100/76); minor base C (1/2); total (102/79) |
| Fisher's exact test for biased strand distribution p-value = 5.81e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 181 total aligned reads displayed.
GCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCA‑GGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGGCTCTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATACCAGGT > CP042583/559489‑560040
|||
ccGTCGAGCAGATATGGCAGGGAAGGGACAAGGGAACTCCAGCAAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg < 2:562416/286‑1 (MQ=255)
tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGCACTTTACGTTCAACCAGCGGCATCACCAGCATGATAAAAGCGTTAATCAACACCTACGCCAGCGGAATTGCGGTAAACGACCTCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGGCATATCGCCCAGACCGATAGCCGCGGCGTGGGCGGCTGTTTTCAACCGGGTCATCATCTCTGTATGCATCGGCggggc > 2:772503/1‑287 (MQ=255)
gcgggCAGATATGGAAGGAAAGGGACAATGGAACCCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTAAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGa < 2:1083712/284‑1 (MQ=255)
tGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGAt < 1:76355/289‑1 (MQ=255)
gggaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCa > 1:974468/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCAtt > 1:493355/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCAtt > 1:1890953/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCAACGGCGGGACGATAA‑CGCGATAAGCCtt > 1:1764525/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGGCGATAACCGCGACAGGCAt > 2:177815/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGCTTTTCACCAGGTTCATCACCTCTGAGGTCATCGGCGGGGCGGTAA‑CGCGATAAGCact > 2:491030/1‑287 (MQ=255)
ggggaAAAGGGAACGCCAGACAAACTCGTACATTATTGCCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTAAACCAGCGTCATCACCAGAATGATAAAAGCGTTAAGCAACACGTACGCCAGCGTAAGGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 2:236760/287‑1 (MQ=255)
agggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 1:727994/288‑1 (MQ=255)
gaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAgg < 1:1599959/287‑1 (MQ=255)
aaCAATGGAACTCCGGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAgg < 1:1052968/286‑1 (MQ=255)
aTGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGcagcag > 1:236760/1‑289 (MQ=255)
aTGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTAATCGGCGGGACGATAA‑CGCGATAAGCATTAGGcagcag > 1:1159365/1‑289 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGt > 1:1628684/1‑289 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGt < 1:699968/289‑1 (MQ=255)
aaCTCCAGTCAAACTCGTACATTCTTACCCCCCCAGGTTGCCAGGCAGGCGACTTTTCCGTGCAACAAGCCTCATCACCAGCATAATAAAATCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTAc < 1:8479/288‑1 (MQ=255)
agtCCGGTCAACCTCGTACATTTTTTGCCCCCCATTTTGCCAGGCAGGTGAACTTTACGTCACACCGGCGTAATAACCAGCAAGATAAAAGCGTTAATCAACCCATACGCCAGCGTAATGGCGGTAACCGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1247981/287‑1 (MQ=255)
accccAGTCAAGCCGGTAATTTATTTGCCCCCCTTGTTGCCAGGAAGGGGAACTTCACTTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGAAATGGCGGTAAACGCCTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1552467/286‑1 (MQ=255)
aCTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGAAGGCGGAGTTTTTCACCAGGTTCATCATCTCTGCGGTCATCGGCGGGCCGATAA‑CGCGATAAGCATTAGGCCGCAGTCCGt > 2:2797/1‑289 (MQ=255)
cTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCCCCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATAATCTCTGAGGTCATCGGCGGGACGATAT‑CACGCTCAGCATTAGGCAGCAGTACGTa > 2:191072/1‑289 (MQ=255)
cTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATGAGCATTAGGCAGCAGTACGTa > 1:865728/1‑289 (MQ=255)
tctaaaGTCGTACATTATTGGCCCCCCATTTTGCGCGGCGGGCGACCTTTACGTTCAACCGGCGTCATCACCAGCAGAATAAAAGCATTAATCAACACATAGCCCAGCGTAATGGCGGTAAACGACCCCCG‑GGCATGGGCTGAGTAATCGAGAAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAt < 2:1159365/286‑1 (MQ=255)
gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTAAGGATAGAt > 1:1539939/1‑289 (MQ=255)
atCAAACTCGTCACTTTTTTGCCCCCCATGTAGCCGGGCAGGCGAACTGTACGTTCAACCAGCGTCATCACCAGAATGAAAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAt < 1:1902222/288‑1 (MQ=255)
cAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTAATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAt < 1:1252543/287‑1 (MQ=255)
aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACTCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc < 2:1009452/289‑1 (MQ=255)
cGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCttc > 1:1551472/1‑287 (MQ=255)
ttACCTTATTTGCCCCCAAAGTGGCCAGGCAGGGGAACTTTACGTTCAACCACGGTCAACACAGGAATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCg < 2:1114276/288‑1 (MQ=255)
acatattttGCACCCCAGGTTGCACGGCAGACGACCTATACGTTCAACCAGCGTAAACACACGCATGTAAAAAGCGTAAATCAACACCTACGCCAGCGTAATGGCGGAAAACGACTCCCC‑GGCATGGGCTAAGTAATCGACCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCgg < 2:606201/282‑1 (MQ=255)
tttGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTc > 1:1073227/1‑289 (MQ=255)
ttGCCCCCAATTTTGCCAGGAAGCAAAATTTTCCGTTCAACCAGCTTCAACACCAGATTGAAAAAAGCTTTAATCAACAACTACCCCGGCGTAATGGCGGTAACCGACTCCCA‑GGCATGGGCTGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCa < 2:294768/289‑1 (MQ=255)
tggCCCCCAAGGTTGCCGGGCAGGGGAACTTTACGTTCAACCAGCGGCATCACAAGAAAGATAAAAGCGTTAATCAACCAATACGCAGGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCa < 2:27000/287‑1 (MQ=255)
tGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAg > 1:305106/1‑289 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCCGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1402821/263‑1 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt > 1:1402821/1‑263 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAAGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCCTATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTCCATCATCCCTGAGGTCCTCGGCGGGACGATGA‑CGGCAGAAGCATTAGTCACCAGGACGTTTGGATAAGCCTGCGGGAGTGTTAg > 2:351593/1‑288 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCa > 1:1918928/1‑288 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCAt < 1:20036/289‑1 (MQ=255)
ccAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAgc > 1:488731/1‑288 (MQ=255)
ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGgcag > 2:985323/1‑239 (MQ=255)
caggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCa > 1:1939673/1‑289 (MQ=255)
aagagcaCTTTCCGTCCAACCGGAGTCATAACCAGAATGATAAAAGCGTTAATCAACACCTAAGCAACCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGGGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCa < 2:920424/282‑1 (MQ=255)
gAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑ttttt > 1:1707024/1‑289 (MQ=255)
cTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCC‑ttttttt > 1:1454529/1‑288 (MQ=255)
aCCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCa > 1:1525912/1‑289 (MQ=255)
aCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATcg < 2:1939673/289‑1 (MQ=255)
cAGCATGAAAAAAGCGTTAAGCAACACAAACGCCATCTTAATGGCGGTAAACGACTCCCA‑GGCATGGCCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATcgcg < 2:401599/289‑1 (MQ=255)
aGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGcc < 2:1797319/222‑1 (MQ=255)
aGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGcc > 1:1797319/1‑222 (MQ=255)
tAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGATGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCAGCGGTAGCGTCAGGCCCATCGCAAGCGCGGCAGTTTTTTTG‑CGCGC‑CGAGCGGCCCTGAATGGCG‑G‑cgcggg > 2:251903/1‑286 (MQ=255)
cGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCCCGGCC‑TTTTTTTT‑CCCTCTCGGCAGCCACTGAATCGCG‑g‑cgctcacccggt > 2:1753433/1‑279 (MQ=255)
tAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGGAACGATAAGCCTGCGGGAGCGCACGGCCCATCGCCCGCGCGGCA‑TTGTTTTT‑GCCTCGCGCCCGCGACTGACACGCA‑G‑CGCGCACCTTGTCGCa > 2:1143032/1‑289 (MQ=255)
acagagcaaagggaaaTGGCGGTACACCAATCCCA‑GGCATGGGCGGGGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACggg < 2:1764525/275‑1 (MQ=255)
aaaaaggccgacGTAATGGCGGTAAA‑CGCACGCATGGCATGGGCTGAGTAATCGGGGACTCGACCCGCCGGCGGCGCCATGTCCACCGGGCCGAGAGTCGAGGCGATGGCGGAGTGTTTCACCAGGTTCATCATCTCTGAGGTAATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACggg < 2:1753759/278‑1 (MQ=255)
aTACGCCAGCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGggcg > 1:1932807/1‑289 (MQ=255)
gCGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCC‑TTTTTTTG‑CCCTCGCGGCAgcgactgaa > 1:1814259/1‑241 (MQ=255)
gCGAAATGGCGATAAACGACTCCCG‑AGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCACCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTaaa < 1:1375213/289‑1 (MQ=255)
cGTAATGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACAAGGGCGGCGGTAAAc > 1:1782185/1‑289 (MQ=255)
aTGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGcc < 1:1265552/289‑1 (MQ=255)
tGGCGGTAAACGACTCCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAACCCTGCGGTAGCGTCAGGCCCCTCCCCAGCGCGGCA‑TTTTTTTT‑CCCTCCCCGCAGCCACCGAAGCGGGCG‑CCCGACCCTTTTC‑CCATCACGGGGCGCGGGAAACAGcc > 2:1007385/1‑288 (MQ=255)
ggtaaccgacacccA‑GGCAGCGGCGCAGTAACCGAGCAATTTACCCGCCTGCGCCGCCGAATCCACCAGACCGTTAGTCGAGGCGCTGGCGGAGTTTTTCACCAGGTTCATCATCTCTGGGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 2:1667413/278‑1 (MQ=255)
ggtaaacgactcCCA‑GGCAT‑GGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 1:1012256/279‑1 (MQ=255)
gtaaacgactcCCA‑GGCATGGGCTGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 1:1812650/280‑1 (MQ=255)
gtaaacgactcCCA‑GGCATGGGCTGAGTAATCGAGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg < 1:2797/280‑1 (MQ=255)
gtaaacgactcCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTAACGATAAGCCCGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTT‑CCCTCGCCGCAGCGACTGCATCGCC‑G‑CCCGTACCTGTTCCCCAACCCGGGCGGCGGTAAAAAGCCCCAggg > 2:1642045/9‑288 (MQ=255)
gtaaacgactcCCA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCCATAAGGATTAGGCCGCAGTAGCTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTGTG‑CCCTCGCCGCAGCGACTGAACCGGT‑G‑CGCGGGACTGTTTGCGAAAACGGGCCGGGGGAAACAGGCCCCgg > 2:557451/9‑288 (MQ=255)
ccA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCCTGGat > 1:1702514/1‑288 (MQ=255)
ccA‑GGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATAGCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTAACCAGGTTCATCATCTCTGAGGTCCTCGGCGGGACGATAA‑CGCGGTAAGCAATCTGCAGCAGTACGTTTCGATAAGGCTGCGGTAGCGCCAGGCCCATCCCCAGCTCGGCC‑TTTTTTTGCCCCTCCCGCCAGGCACTG‑ATCGCG‑GACGGGT‑GCTGTTCGGAAACAAGGGCGGCGGGTAAAAGTCCCAgggcggccaagggc > 2:146325/1‑277 (MQ=255)
ggctgagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGGACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGaaa > 1:685857/7‑289 (MQ=255)
gctgagTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGaaaa > 1:1658754/6‑289 (MQ=255)
tagttaaccgggaaaTTCACCCGCCTGCGCCGCCATAGCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTGTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGaaaaa < 2:695232/275‑1 (MQ=255)
agTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGTGGCAGCGAACGAATCGCG‑G‑CGCGTACCTGTTCGCAACCACGGGCCGCGGTAAACAGCCCCAGGCCGCGCATGGAACAAAGGGAAAAcgg > 2:1874611/2‑287 (MQ=255)
agTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCCTGGATGAAAGGAAAAACTg > 1:883868/2‑289 (MQ=255)
agTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTg > 1:1185146/2‑289 (MQ=255)
agTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCCGCAGCGACTGAATCGCG‑G‑CCCGTACCTGTTCGCAAACACGGGCGCCGGTAAACAGCCCCAGGCAGAGCATGGATGCAAGGAAAAACTg > 2:1116889/2‑289 (MQ=255)
aacggagcgcttttCCCGCCGGGGCCGCCCTAGTCACCCGACCGATAGTCGAGGCGATGGGGGAGTTTTTCACCAGGTTCATCGTCGCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGaa < 2:1568498/278‑1 (MQ=255)
tCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTCCCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCCGGCCGACAACGGCTCAAAGGAAAAAcataatct > 2:1587466/1‑282 (MQ=255)
cAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCAACGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAAACGCG‑G‑CGCGTACCTGGTCGCAAAACCGGGCGGCGGGAAACAGCCCCCGGCAGAGCCAGGATGAAAGGAAAAAccggaaatttggg > 2:807926/1‑277 (MQ=255)
cccGCCGGCGCGGCCATATCCACCAGACCGGTAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCt < 2:1858895/289‑1 (MQ=255)
tGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCt > 1:1325018/1‑289 (MQ=255)
tGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCAACATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGGAAACAGCCCCAGGCAGAGCATGGAGGAAAGGAAAAACGGAACAATGGGAACCAGCCCGGc > 2:1482309/1‑287 (MQ=255)
cgccgcCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTT‑‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTCAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCCCGGCCTTaa > 1:593566/1‑289 (MQ=255)
tCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCCGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGATCGGCCTTAAACCACAtt > 1:1504600/1‑287 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACggg > 2:1177240/1‑200 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACggg < 1:1177240/200‑1 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTaaa < 2:1265979/210‑1 (MQ=255)
aCCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGccc > 1:985338/1‑216 (MQ=255)
cGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCACTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCCTGTCGCAAACACGGGCGGCGGGAAACAGCCCCAGGCCGAGCATGGAGGAAAGGAAAAACTGGATATTGGGATCCAGCGCGGCCCTAAACCACATGCCGATTTtcc > 2:1567621/1‑287 (MQ=255)
ggaggggATGGCGGGGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGgcag < 2:1525912/282‑1 (MQ=255)
ctgggCGATGGCGAAGTTTTTCCCCGGGGTCATCAGTTCTGCGGCCATCGGGTGGACAATAA‑CGCGATAAGCATGTGGCAGCAGTAAGGATCGTTAAGCCTGCGGTAGCGTCAGGCCCAGCGCCAGCGCGGCA‑TTTTTTTG‑CCATCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGgcag < 2:1213824/285‑1 (MQ=255)
aggCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGGAAACAGCCCCAGGCCGAGGATGGATGAAAGGGAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGAATTTCCCCGgcagca > 2:501900/2‑288 (MQ=255)
cGATGTCGGAGTTTTTCACCAGATTCATCATCTCTGAGGTCATCTGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCt < 1:523188/288‑1 (MQ=255)
cGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGa < 1:651745/288‑1 (MQ=255)
aGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGAGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCCGCGACTGAATCGGG‑G‑AGCGTACCTGGTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGGCGAGCAAGGAAGAAAGGAAAAACCGCATATTGGGATCCCGCCCGGCCTTAAACCAAACGCCGATTTTCTCCGgcagaggcacccggaccc > 2:742284/1‑274 (MQ=255)
tttttCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATTCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCa > 1:121232/1‑289 (MQ=255)
ggTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATACCAGGt > 1:144454/1‑289 (MQ=255)
ggTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGCGACTGAATCGCG‑G‑CCCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCCTGGATGAAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTCCCCCGGCAGCAGCCTCGGGATCaccaggtaccaggt > 1:1856471/1‑289 (MQ=255)
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GCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCA‑GGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTG‑CCCTCGCGGCAGGCTCTGAATCGCG‑G‑CGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTAAGGAAAAACTGAATATTGGGATCCAGCTCGGCCTTAAACCACATGCCGATTTTCTCCGGCAGCAGCTCCGGGATCACCAGATACCAGGT > CP042583/559489‑560040
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
