Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 744,068 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583744,0680AT99.6% 608.4 / NA 256intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (111/144);  total (112/144)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583744,0690GC99.6% 606.8 / NA 256intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (111/143);  total (112/144)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583744,0700TA99.6% 606.5 / NA 256intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (112/143);  total (112/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 256 total aligned reads displayed.

TGCGGATGAGAAACTGGATCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTAGTAGCG‑TAATGTTCCTCAAACCGGGCGATCAGGTTAGCGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGAGTTTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCG  >  CP042583/743791‑744346
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
tGCGGATGAGAAACTGGATCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGt                                                                                                                                                                                                                                                                              <  1:1887746/289‑1 (MQ=255)
        agaAACTGGATCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCtgatga                                                                                                                                                                                                                                                                       <  2:1615454/288‑1 (MQ=255)
                  tCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGcc                                                                                                                                                                                                                                                            >  1:1159879/1‑289 (MQ=255)
                     cgcgAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGAGAAGATTAAACTCACCGAGATGGTGACGGTCGGTAAAGCTGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCGGACTTGAACAAAGGCGTGATTATCCAGTCCGGTAATTACGCCTGTATTGCTGTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTAGTGGTCGGATGAATGGTTATCGCaaa                                                                                                                                                                                                                                                         >  2:1153529/1‑289 (MQ=255)
                              gACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCGCCGATATGGTGACGGTCGGTAAAGATGCCTGTGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGt                                                                                                                                                                                                                                                <  1:709555/289‑1 (MQ=255)
                              gACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGt                                                                                                                                                                                                                                                <  2:1529029/289‑1 (MQ=255)
                               aCTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTggg                                                                                                                                                                                                                                                 >  1:85001/1‑287 (MQ=255)
                                  aaaaGCATGACCAGCTAGGTGGTTGGGCAGGGGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGa                                                                                                                                                                                                                                            <  2:1009197/289‑1 (MQ=255)
                                      tCATGACCAGCGATGTGGTTGGGCAGGCGGTTAAGGCCGATAAGGTTAAACTCACCGATATGGTGACGGTCGGGAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCaa                                                                                                                                                                                                                                        <  2:1414449/289‑1 (MQ=255)
                                          gaacggCTATGGGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACCCACCGATGTGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACt                                                                                                                                                                                                                                    <  2:713792/284‑1 (MQ=255)
                                          gACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACt                                                                                                                                                                                                                                    <  1:276271/289‑1 (MQ=255)
                                          gACCAGCCATGTGGTTGGGCAGGCGATGAAGGCCGATACGATTAAACTCACCGATATTGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACt                                                                                                                                                                                                                                    <  2:519653/289‑1 (MQ=255)
                                          gACCAACTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAAATTAAACTCACCTATATGGTGACTGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GT‑TCATCGTTAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTTGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACt                                                                                                                                                                                                                                    <  1:1554850/289‑1 (MQ=255)
                                           ccaaGCTATGGGGTTGGTCAGGAGCTTCAGACAGAAAAGATTAAGCTCACCGAGATGGGGCAGGTCGGTAAAGAGGCCTGGGCGACGGGAAATCCTGCACTGCGTG‑GTTCATCGG‑TAATGTGCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACt                                                                                                                                                                                                                                    <  2:11087/285‑1 (MQ=255)
                                           accggttATGTGGTTGGGCAGGCCCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTa                                                                                                                                                                                                                                   <  1:1656736/283‑1 (MQ=255)
                                               gCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTACTGACGCCTGTATTGCGCTGGCTGATGACGTTGCCGGGATCCAGGAGTCATTTCTTGTTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCt                                                                                                                                                                                                                                >  1:970932/1‑288 (MQ=255)
                                                    gtgGTTGGGCAGGCGGTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGa                                                                                                                                                                                                                          <  1:525082/289‑1 (MQ=255)
                                                      ggTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGAc                                                                                                                                                                                                                         <  2:336570/288‑1 (MQ=255)
                                                        ttGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACGGGGTCTGACCAACAATACCTTCCAGCCGGt                                                                                                                                                                                                                      >  2:666601/1‑289 (MQ=255)
                                                          gggCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTg                                                                                                                                                                                                                     >  1:126410/1‑288 (MQ=255)
                                                          gggCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGc                                                                                                                                                                                                                    >  1:177958/1‑289 (MQ=255)
                                                          gggCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGc                                                                                                                                                                                                                    >  1:562980/1‑289 (MQ=255)
                                                          gggCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATGGCGCTGGCTGCTTACGTTGCCGGGAGCCAGGAGTCATTTATTGGGCTGATGAATGGGTCTGTCAAAAAAACGGGTCTGACCAACACTACGTTCCAGACGGTGc                                                                                                                                                                                                                    >  2:1577029/1‑289 (MQ=255)
                                                            gCAGGCGCTTAAGGCGGGTACGATGAACCTCACCGCTATGGTGACGGTCGGTAAAGATGCCTAGGCGACGGGAAATCCGGCACTGCGTG‑ATTCATCGG‑TAAGGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTAGCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACGACCTTCCAGACGGTGCa                                                                                                                                                                                                                   <  2:600489/288‑1 (MQ=255)
                                                            gCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCa                                                                                                                                                                                                                   <  1:1595839/288‑1 (MQ=255)
                                                            gCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCa                                                                                                                                                                                                                   <  2:1519075/288‑1 (MQ=255)
                                                            gCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCa                                                                                                                                                                                                                   <  2:1792588/288‑1 (MQ=255)
                                                             cAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGt                                                                                                                                                                                                                                                <  2:1469407/258‑1 (MQ=255)
                                                             cAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGt                                                                                                                                                                                                                                                >  1:1469407/1‑258 (MQ=255)
                                                               ggCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAaca                                                                                                                                                                                                                                      <  2:544697/266‑1 (MQ=255)
                                                                 cgcTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGc                                                                                                                                                                                                               <  1:429933/287‑1 (MQ=255)
                                                                              tAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGAc                                                                                                                                                                                                                         <  1:1528124/264‑1 (MQ=255)
                                                                              tAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                <  1:67983/289‑1 (MQ=255)
                                                                              tAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                <  1:1126451/289‑1 (MQ=255)
                                                                              tAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                <  1:362073/289‑1 (MQ=255)
                                                                              tAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                <  1:1621965/289‑1 (MQ=255)
                                                                               aaGGTTCAACGCAACGCTGTGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                <  2:958544/288‑1 (MQ=255)
                                                                                 gATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATgcgc                                                                                                                                                                                                     <  1:312444/281‑1 (MQ=255)
                                                                                           aCCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTTGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATTCTCCGGGGCAGTTCaccacc                                                                                                                                                                                    >  2:1699547/1‑288 (MQ=255)
                                                                                           aCCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACt                                                                                                                                                                                                                                    <  1:777921/240‑1 (MQ=255)
                                                                                           aCCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGa                                                                                                                                                                                                                          <  2:1802062/250‑1 (MQ=255)
                                                                                           aCCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCAcc                                                                                                                                                                                    >  1:1227785/1‑288 (MQ=255)
                                                                                           aCCGATATAGTGACGGCCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCGGGGAGCCAGGAGACATTTATTGGTCTGATGATTGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCCCGGCCTGGAAGCGACGGGGCCGtg                                                                                                                                                                                           >  2:312444/1‑280 (MQ=255)
                                                                                             caatatGGTTGCTGTCGGTAAATATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑TTTCATTGG‑TAATGTCCCTCAAACCGTGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACcgcg                                                                                                                                                                                 <  1:552489/287‑1 (MQ=255)
                                                                                             cGATATTGTGCGGGTCGGTAAAGGTGCGTGGGCGACGGGAAGTCGGGTACTGCGTGTGTCATCG‑T‑TAAGGTTCCTCAACCCGGTCGATCGGGTTTGGGGGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGGGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTAATTTATTGGTCTGATGAATGGTTATGCCAAAAGACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACcgcg                                                                                                                                                                                 <  2:1335535/289‑1 (MQ=255)
                                                                                                tatGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACcgcgcg                                                                                                                                                                               <  1:1153529/288‑1 (MQ=255)
                                                                                                     tGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑Gata                                                                                                                                                                         <  1:1844873/288‑1 (MQ=255)
                                                                                                       aCGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATg                                                                                                                                                                       >  1:182797/1‑288 (MQ=255)
                                                                                                        cggtcggtAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATgg                                                                                                                                                                      <  1:1030305/288‑1 (MQ=255)
                                                                                                          gtcggtAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGa                                                                                                                                                                                                                          <  1:752724/235‑1 (MQ=255)
                                                                                                          gtcggtAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGa                                                                                                                                                                                                                          >  2:752724/1‑235 (MQ=255)
                                                                                                          gtcggtAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCAt                                                                                                                                                                   >  1:1370138/1‑289 (MQ=255)
                                                                                                          gtcggtAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCAt                                                                                                                                                                   >  2:80298/1‑289 (MQ=255)
                                                                                                                  agcggccgtggtgACGGGAAATCCGGACCTGCTTG‑GTTCCTCGG‑TAATGTTCCGCAAACCGGGCGATCAGGTTTCGGTGGCCGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAAGGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGt                                                                                                                                                           <  2:1910651/277‑1 (MQ=255)
                                                                                                                    aTGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCCCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACACAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTTCGCTGGCTGACTACGTTACCGGGCGCCAGGTGTCATGTATTGGTATGATGAATGGTTATGCTAACAAACCGGGTCTGACCAACACTACCTTCCAAGCGGAGCAACGCTCGGATTGGCCGTGGCATCTCAGGCTCTCCCGC‑GATACGGCATGGCCGGGtta                                                                                                                                                         >  2:424402/1‑287 (MQ=255)
                                                                                                                       ccTGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTAAGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGc                                                                                                                                                      >  1:144189/1‑289 (MQ=255)
                                                                                                                         tGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCAt                                                                                                                                                    >  1:1863991/1‑289 (MQ=255)
                                                                                                                         tGGGCGACGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGACCGGACGGGATGCTGCGGGGCAGGTCAGCACCGCTGCC‑GATATGGCGTTGCTGGGTAAAGCAt                                                                                                                                                    >  2:925752/1‑289 (MQ=255)
                                                                                                                         tGGGCAACGGATAATCCGGCACTGCATG‑GTCAATGGG‑GAATGGACATCAAACCGTGCGATCAGGTTTCGGTGGCAGACGTGAACAAAGGTGTGAGTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCGGATTACTTTGCCGGGAGCCAGGAGTCATTTATTGGGCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCAt                                                                                                                                                    <  2:2130/289‑1 (MQ=255)
                                                                                                                                cGGGAAATCCGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCGGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATcg                                                                                                                                              >  1:238837/1‑287 (MQ=255)
                                                                                                                                        ccGGCACTGCGTG‑GTTCATCGG‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGc                                                                                                                                     <  2:182797/289‑1 (MQ=255)
                                                                                                                                                  cgtggttcatcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTGTGCCAAAAAACTGGGTCTTACCAACACTACCTTCCAGACGGTGCACGGCCTGTATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GCTATGGCATGGCTGGGTACAGCATGGCTCCACGATGTGCCGGAAGAGt                                                                                                                            >  2:393986/13‑289 (MQ=255)
                                                                                                                                                  cgtggttcatcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCCCCG‑GCTCGGATTAGGCATTGCGGGGGAAAGGCTTGACCCCCGATGTGCCGGAagagg                                                                                                                            >  2:1645962/13‑288 (MQ=255)
                                                                                                                                                  cgtggttcatcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGt                                                                                                                            >  2:634953/13‑289 (MQ=255)
                                                                                                                                                  cgtggttcatcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGt                                                                                                                            >  2:223012/13‑289 (MQ=255)
                                                                                                                                                       ttcatcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACcgcgcg                                                                                                                                                                               >  2:1289782/8‑234 (MQ=255)
                                                                                                                                                          atcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                >  2:479305/5‑214 (MQ=255)
                                                                                                                                                          atcgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCAt                                                                                                                     >  1:1739374/5‑288 (MQ=255)
                                                                                                                                                            cgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCCGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTCCCTTCCAGACGGTGCCCGGCCTGGAGTCGCCGGGGCAGTTCAGCACCGCGCCC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGAAGTGCTGGAGCGGTACGCCATTCa                                                                                                                  >  2:1168650/3‑289 (MQ=255)
                                                                                                                                                            cgg‑TAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCa                                                                                                                  >  1:1519928/3‑289 (MQ=255)
                                                                                                                                                                  aTGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTa                                                                                                                                                          <  2:1862003/244‑1 (MQ=255)
                                                                                                                                                                     ttCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                >  1:809131/1‑204 (MQ=255)
                                                                                                                                                                       ccTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                >  1:333953/1‑202 (MQ=255)
                                                                                                                                                                        cTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATaaagagaaag                                                                                                       >  1:685067/1‑289 (MQ=255)
                                                                                                                                                                         tCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCATTTCAGCACCGCGCGC‑GATATGGACTTGCTGGGTAAAGCATTGATCCACGATGTGCCTGAAGAGTAACCCATCCATaacgggaaaga                                                                                                      >  2:1375772/1‑289 (MQ=255)
                                                                                                                                                                          cAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGt                                                                                                                                                                                                                                                                              <  2:771571/121‑1 (MQ=255)
                                                                                                                                                                          cAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATaaagagaaagag                                                                                                     >  1:580934/1‑289 (MQ=255)
                                                                                                                                                                                  gCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGGCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCCTTGCTGGGTTAAGCATTGATCCACGAGTTGACGGAAGGTTACTGCATTCATAAATCGCAAGAGTTCa                                                                                                 >  2:496619/1‑285 (MQ=255)
                                                                                                                                                                                                    cAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCgggg                                                                                                                                                                                                <  1:1147292/173‑1 (MQ=255)
                                                                                                                                                                                                          tGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCtaaccg                                                                     <  2:277048/289‑1 (MQ=255)
                                                                                                                                                                                                             ccAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGCGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATTCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCtaaccgta                                                                   <  1:725549/287‑1 (MQ=255)
                                                                                                                                                                                                                   gtgtGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCtaaccgtaaccg                                                               >  2:682981/1‑286 (MQ=255)
                                                                                                                                                                                                                    tgtgATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTAGGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTc                                                             <  1:1059768/287‑1 (MQ=255)
                                                                                                                                                                                                                    tgtgATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTc                                                             <  1:204461/287‑1 (MQ=255)
                                                                                                                                                                                                                      tgATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCCTTCATAAAGAGACAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTct                                                            >  1:918201/1‑286 (MQ=255)
                                                                                                                                                                                                                            tCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGag                                                   <  1:1297424/289‑1 (MQ=255)
                                                                                                                                                                                                                             ccAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCgg                                                                                                                                  <  2:1810829/209‑1 (MQ=255)
                                                                                                                                                                                                                             ccAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCgg                                                                                                                                  >  1:1810829/1‑209 (MQ=255)
                                                                                                                                                                                                                             ccAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGagc                                                  >  2:1313801/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ccGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGaa                                                                                                                                <  2:701777/206‑1 (MQ=255)
                                                                                                                                                                                                                                           aCGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGAtg                                                                                                                                        >  2:1127078/1‑189 (MQ=255)
                                                                                                                                                                                                                                             gCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTg                                  <  1:956371/289‑1 (MQ=255)
                                                                                                                                                                                                                                               cTGTATTGGGCTGGTGGATTACGTTGCCGGGAGCCAGGATTCTTTTATTGGTTCGGTGAATGGTTATGCCAAATAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCATGGCCTGTATGCGCCGGGGCAGTTCAGCACCGCGCGG‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGAt                                <  2:1892462/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       cgcTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACACCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGaa                        >  1:1583204/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         ctggctgATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAg                       >  1:398190/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           ggctgATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACa                    <  1:1313801/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ttGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGc         >  1:1908518/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      ttGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGACTGGATGCGACGGGGCAGCTCAGCACCTCGAGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGACGAGTACGCCATTCCTAAAGAGAAAGAGCTCACATTCAACAAACTTCATACGCCTAAACGTAACCGTCTGCTGACGAGCAGCATACTGATGATTACTGGCATGATGACAGGAACCACgtt         >  2:1258341/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                           gggAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGgcg    <  2:580934/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGgcgc   <  1:634953/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
TGCGGATGAGAAACTGGATCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTG‑GTAGTAGCG‑TAATGTTCCTCAAACCGGGCGATCAGGTTAGCGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGAGTTTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGC‑GATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCG  >  CP042583/743791‑744346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A