Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 794,243 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583794,2430AT99.7% 686.1 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (157/132);  minor base C (1/0);  total (158/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583794,2440CG100.0% 686.5 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (158/132);  total (158/132)
*CP042583794,2450TA99.3% 690.1 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (157/131);  minor base C (1/1);  total (158/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 290 total aligned reads displayed.

GATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCGCTAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCGCTCTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGACTCTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCGCTAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAA  >  CP042583/793968‑794521
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                    
   ttGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAACTCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATc                                                                                                                                                                                                                                                                          >  1:1122531/1‑287 (MQ=255)
                    gTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATcgcg                                                                                                                                                                                                                                                        <  1:277927/288‑1 (MQ=255)
                    gTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATcgcg                                                                                                                                                                                                                                                        <  1:1858627/288‑1 (MQ=255)
                          tAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTAACGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACg                                                                                                                                                                                                                                                  <  2:1736490/288‑1 (MQ=255)
                            aaCCATCGGGGGAGCTTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAAc                                                                                                                                                                                                                                               <  2:1415339/289‑1 (MQ=255)
                                  cGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGt                                                                                                                                                                                                                                         <  1:1499178/289‑1 (MQ=255)
                                      gTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCCGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGac                                                                                                                                                                                                                                      <  1:356662/288‑1 (MQ=255)
                                        aGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGacac                                                                                                                                                                                                                                    >  1:1428767/1‑288 (MQ=255)
                                                 cATCAAGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCTCTGTTTTGCGTATCGCCCCGACGAACGCCAGTGCCACCCATTGGATc                                                                                                                                                                                                                          >  2:480069/1‑289 (MQ=255)
                                                      aGTGCTGCCATGCAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCgg                                                                                                                                                                                                                     <  1:180886/289‑1 (MQ=255)
                                                                  cAGCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGCTCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACttcttc                                                                                                                                                                                                           <  2:641503/287‑1 (MQ=255)
                                                                    gCCTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGGTACACCCATTTGATCGCCGGTCACTTACTCCAGc                                                                                                                                                                                                       >  2:599515/1‑289 (MQ=255)
                                                                     ccTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGGGCAGACGAACGCCAGGGACACCCATTTGATCGCCCGTCACTTCTTCCcgcg                                                                                                                                                                                                      >  2:1445676/1‑289 (MQ=255)
                                                                     ccTGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCg                                                                                                                                                                                                      >  1:51998/1‑289 (MQ=255)
                                                                       tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCCACAAAAAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACCCCAGTGCCACCCATTTGATCGCCCGTCACTTCTTCCCGCGt                                                                                                                                                                                                     >  2:1390611/1‑288 (MQ=255)
                                                                       tGTACCGGCCGAAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCg                                                                                                                                                                                                                                                                         >  2:887336/1‑220 (MQ=255)
                                                                             ggccgtAGTAATGAGCTGGGGATAAAAGTGATCCCGCACGTGGCCTGAGGCAAAGACGCGAGGAATGCTGGTCTGTGTGGCAGTACCATGAATACCCGACTGGACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTTACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGGCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTg                                                                                                                                                                                              <  2:1880263/284‑1 (MQ=255)
                                                                             ggccgaaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTg                                                                                                                                                                                              <  1:1445676/283‑1 (MQ=255)
                                                                              gccgaaGTAATGGCCTTGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCAGACTGTACTTTGATGTAGCCGTGTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGAAACGTCGATTGACTCGATGTTCTCGCTGTTTTTCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATAGCCGGTCAATTTCTCCCGTGTACGGGTgg                                                                                                                                                                                             >  2:1597300/6‑289 (MQ=255)
                                                                              gccgaaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTgg                                                                                                                                                                                             >  1:979599/6‑289 (MQ=255)
                                                                               ccgaaGTAATTGCCTGGCGATAAATGTGATCCATCACGTCGCCGGCGGCAAAGACGCCCGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCCGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATATCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCCGTGTCCCCCATTTGAACGCCGGTACCTTCTTCCAGCGTACGGTTGgt                                                                                                                                                                                            >  2:1519834/5‑289 (MQ=255)
                                                                               ccgaaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACGGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTAGCGCTGTTTTGCGTATCGCGCAGACGAACTCAAATGACACCCATGTGAACGCCGGTCACTTCTTCCACCGTACGTTTAgt                                                                                                                                                                                            >  2:511503/5‑289 (MQ=255)
                                                                               ccgaaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGgt                                                                                                                                                                                            >  1:851621/5‑289 (MQ=255)
                                                                                cgaaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGgt                                                                                                                                                                                            <  1:1558377/285‑1 (MQ=255)
                                                                                  aaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGgtgt                                                                                                                                                                                          <  2:1538543/287‑1 (MQ=255)
                                                                                  aaGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGtgtg                                                                                                                                                                                         <  1:1535342/288‑1 (MQ=255)
                                                                                       aTGGCCTGGCGATAAATGTGCTCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGaa                                                                                                                                                                                    <  1:172233/289‑1 (MQ=255)
                                                                                        tGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAat                                                                                                                                                                                   >  1:720150/1‑289 (MQ=255)
                                                                                             tGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGCGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGGTTGCATAatgagtt                                                                                                                                                                              >  2:1291195/1‑286 (MQ=255)
                                                                                               gCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGtt                                                                                                                                                                             >  2:1089414/1‑288 (MQ=255)
                                                                                               gCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGtt                                                                                                                                                                             >  1:122980/1‑288 (MQ=255)
                                                                                               gCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGtt                                                                                                                                                                             >  1:1070690/1‑288 (MQ=255)
                                                                                                cGATAAATGTGATCCATCCCGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCGGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTg                                                                                                                                                                            <  1:151472/288‑1 (MQ=255)
                                                                                                cGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTg                                                                                                                                                                            <  1:1765670/288‑1 (MQ=255)
                                                                                                cGATAAATGTGATCCATCACGTCGCCTGAGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTg                                                                                                                                                                            <  2:1801948/288‑1 (MQ=255)
                                                                                                         tgATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTcc                                                                                                                                                                   >  1:1262041/1‑288 (MQ=255)
                                                                                                          gATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCa                                                                                                                                                                  <  1:511347/288‑1 (MQ=255)
                                                                                                               aTCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTCGGTGTGCAGAATGATGTTGCCGTTCTCCCCTTTa                                                                                                                                                             >  1:1574421/1‑288 (MQ=255)
                                                                                                                 cACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGACCGCCAGTGACACCCATTTTATCGCCGGTCACTTCTTCCAGCGTACGGCTGGTGTGCATAATGCTGTTGCCGCTCCCCACTTTAtt                                                                                                                                                           >  2:1626876/1‑287 (MQ=255)
                                                                                                                 cACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGCTCTCCACTTTATc                                                                                                                                                           >  2:1382770/1‑288 (MQ=255)
                                                                                                                      cGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTTATCGCCGGTCCCTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAg                                                                                                                                                     >  1:1186799/1‑289 (MQ=255)
                                                                                                                      cGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAg                                                                                                                                                     >  2:719989/1‑289 (MQ=255)
                                                                                                                      cGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTACTCCACTTTATCCATCAg                                                                                                                                                     >  1:1527143/1‑289 (MQ=255)
                                                                                                                        ccTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACTGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCCGCGATACGCATTTGACCGCCGGGCACTTTTTCCAGCGTACGGTCGTTGTCCAGAATGCTTTTGCCGTTCTCCACTTATTCCATCTgg                                                                                                                                                    >  2:1770715/1‑288 (MQ=255)
                                                                                                                        ccTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTCCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGACGTTCTCCACTTTATCCATCAGgc                                                                                                                                                   >  1:562814/1‑289 (MQ=255)
                                                                                                                               cAAAGACGCCAGGAATGGTGGTCTGGGTGGCATTACCATGAATACCCGAATGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGGAGGATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTTGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCAATTGATCGCCGGTCACTTCTTCCAGCGTACGGt                                                                                                                                                                                                <  1:1772819/237‑1 (MQ=255)
                                                                                                                                        cAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGAtttt                                                                                                                                   >  1:935508/1‑289 (MQ=255)
                                                                                                                                            aaTGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTc                                                                                                                                <  2:1469480/288‑1 (MQ=255)
                                                                                                                                              tGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGtt                                                                                                                                                                       >  2:1010659/1‑247 (MQ=255)
                                                                                                                                              tGCTGGTCTGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGtt                                                                                                                                                                       <  1:1010659/247‑1 (MQ=255)
                                                                                                                                                      tGGGTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGaaa                                                                                                                      >  1:1303151/1‑288 (MQ=255)
                                                                                                                                                        ggTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCg                                                                                                                   >  2:959336/1‑289 (MQ=255)
                                                                                                                                                        ggTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCg                                                                                                                   >  1:366236/1‑289 (MQ=255)
                                                                                                                                                        ggTGGCATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCCCGGAAACCg                                                                                                                   >  1:1183583/1‑289 (MQ=255)
                                                                                                                                                          tagCATTACCATCAATTCCAGCCGGTGATTTTATGTAGGCGGTTTCCAGTGCTCACTGCCCTTCGAAAAACTCAGTATTCGGGCTGTGACCGAAAGCAACAAACAGCCCGGCCACGTCGAGTGCCTCGATGTTATCGCTGTTTTGCGTATCGGGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGGATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGt                                                                                                                  <  2:1358282/286‑1 (MQ=255)
                                                                                                                                                             cATTACCATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCAc                                                                                                               <  2:1548504/288‑1 (MQ=255)
                                                                                                                                                                  ccATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCAcggcgg                                                                                                          >  1:1648762/1‑288 (MQ=255)
                                                                                                                                                                  ccATGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGt                                                                                                         >  1:473008/1‑289 (MQ=255)
                                                                                                                                                                    aTGAATACCCGACTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGa                                                                                                       <  1:88187/289‑1 (MQ=255)
                                                                                                                                                                       aatacccgactGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTCATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGCTTTTTTCCGCGCGGAAACCTGCACGGCGGTGAAt                                                                                                     >  2:1685683/10‑288 (MQ=255)
                                                                                                                                                                            ccgactGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGAt                                                                                                >  1:1398456/5‑288 (MQ=255)
                                                                                                                                                                            ccgactGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGAt                                                                                                >  1:1907323/5‑288 (MQ=255)
                                                                                                                                                                            ccgactGTACTTTGATGTAGCCGTTTTCCAGTCCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCCCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATg                                                                                               >  1:31815/5‑289 (MQ=255)
                                                                                                                                                                            ccgacggTACTTAGATGTAGCCGTTTTCCAGTGCCAGCGGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATg                                                                                               <  2:675826/283‑1 (MQ=255)
                                                                                                                                                                              gactGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCa                                                                                             <  1:806046/287‑1 (MQ=255)
                                                                                                                                                                                 tGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACt                                                                                           >  1:1333890/1‑288 (MQ=255)
                                                                                                                                                                                 tGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACt                                                                                           >  1:480619/1‑288 (MQ=255)
                                                                                                                                                                                   tACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTcc                                                                                        >  1:610985/1‑288 (MQ=255)
                                                                                                                                                                                     cTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGCATCCGAACCACTTccga                                                                                      >  2:1889848/1‑286 (MQ=255)
                                                                                                                                                                                       tttaTGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTCCGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    <  1:251694/286‑6 (MQ=255)
                                                                                                                                                                                       ttGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    <  2:182432/289‑6 (MQ=255)
                                                                                                                                                                                       ttGATGTAGCCGTGTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGTTGTGACCGATAGCATCAAACAGCCCGGCAACGTCGGGTGATTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGATCGCCAGTGACACCCATCTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    <  2:926633/289‑6 (MQ=255)
                                                                                                                                                                                             tAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                              >  2:1253047/1‑289 (MQ=255)
                                                                                                                                                                                             tAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                              >  2:909102/1‑289 (MQ=255)
                                                                                                                                                                                              aGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                              <  1:1886269/288‑1 (MQ=255)
                                                                                                                                                                                              aGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                              <  1:1291195/288‑1 (MQ=255)
                                                                                                                                                                                              aGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                              <  1:641901/288‑1 (MQ=255)
                                                                                                                                                                                              aGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                              <  1:1089414/288‑1 (MQ=255)
                                                                                                                                                                                               gCCGTTTTCCAGTTCCAGCTGCCCTTCGAAACTCGCAGTATTCGGGCTGTTACCGATAGCAACAACCAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTa                                                                            <  1:921868/289‑1 (MQ=255)
                                                                                                                                                                                               gCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    >  2:545155/1‑276 (MQ=255)
                                                                                                                                                                                                          gttccagCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATTGTGCCGTTCTCCCCTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCCCGGCGGTGAATCCGATGCACTTCCGAAGCGATGTTAGACAGCTACa                                                                  >  2:1157750/1‑288 (MQ=255)
                                                                                                                                                                                                            tccagCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAgc                                                                <  1:699621/288‑1 (MQ=255)
                                                                                                                                                                                                             ccagCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    <  1:1024303/267‑6 (MQ=255)
                                                                                                                                                                                                                        tCGAAAATCCGATTATTCGGGCAGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACcg                                                   <  2:653834/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGa                                                                                                 >  2:1274523/1‑223 (MQ=255)
                                                                                                                                                                                                                                               gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGTCTAATGAGGATTTTTTCCGCGCGGAAACCGTCCCGGCGGTGAATCCGATGCACTTCCGAAGCGATGTTAGCCAGATACAGCGCCTCGTCAACCGCGGTATTGCCGCCGCCCATgcc                             >  2:225328/1‑286 (MQ=255)
                                                                                                                                                                                                                                               gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGAc                             >  2:1041044/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGACTTTTTCCGCGCGGAAACCGCCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACACGGCCCCTTCAACCTCGGTATTGACGCCGCAgacgac                             >  2:293338/1‑288 (MQ=255)
                                                                                                                                                                                                                                                tgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATTTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCCAGCGGCAACCGTCACCGCGGTGAATCAGATGCACTTCCGAAGCGTTGGTAGACAGATACAGCGCCTCTTCAACCTCTGGATTGCCGTCGCCGATGAcc                            >  2:1647244/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 gACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    <  2:410007/231‑6 (MQ=255)
                                                                                                                                                                                                                                                 gACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    >  1:410007/1‑226 (MQ=255)
                                                                                                                                                                                                                                                 gACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTCAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCg                           >  2:206455/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  aCCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCa                         >  1:1380968/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          caacaaACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTg                                                                                                                                                                                              >  2:1234126/1‑116 (MQ=255)
                                                                                                                                                                                                                                                            acgacctggcagtcAACCTCGAGTGACTCGATGTTACCGCGGTGTTGCGTATCGCGCAGACGAACGCCAGTGACTCCCATTTGATCGCCGGTCACTTCTTCCAGAGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGTCGCTTAATGAGGATTTTTTCCGCGCGGCAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGt               <  2:347624/276‑1 (MQ=255)
                                                                                                                                                                                                                                                            acaaacaGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCa                                                                                                                                                                  >  1:1246152/1‑142 (MQ=255)
                                                                                                                                                                                                                                                                    aCCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATag       >  1:1469368/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       ggCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTccgaag                                                                                    <  2:1526519/209‑6 (MQ=255)
                                                                                                                                                                                                                                                                         cAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCTCCGATGACCGCAACCTTTTGGTTGCGATAgaagaa  >  2:1187452/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         cAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAgaagaa  >  2:806656/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                    
GATTTGTAAAATTATTTTGCGTCAGCTAAACCATCGAGGTAGCGTTCCGCATCAAGTGCTGCCATGCAGCCTGTACCGGCGCTAGTAATGGCCTGGCGATAAATGTGATCCATCACGTCGCCTGCGGCAAAGACGCCAGGAATGCTGGTCTGGGTGGCATTACCATGAATACCGCTCTGTACTTTGATGTAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGACTCTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCGCTAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAA  >  CP042583/793968‑794521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A