Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 833,994 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583833,9940AT98.8% 591.3 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (124/126);  minor base G (2/1);  total (127/127)
Fisher's exact test for biased strand distribution p-value = 6.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583833,9950GC99.6% 595.4 / ‑6.0 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (125/127);  minor base T (1/0);  total (127/127)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01
*CP042583833,9960TA99.6% 602.6 / NA 254intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (126/127);  minor base C (1/0);  total (127/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 254 total aligned reads displayed.

GTGCTGACTGCTGATGAGAGTAAAAGTTGATGTAAACTGCTGATGAGAGTAAATCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAAGTGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGAGTGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATCGT  >  CP042583/833720‑834272
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                    
agccagtgtgtcgggaaacggaagaccgcgtgcagactgatgatggtagtaaaTCTTGGGTTTTGTGGTCATTATGCCCGGGCGCTAAGCGTCCAGGCGTCTGCCCGGGAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCGGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACg                                                                                                                                                                                                                                                                           <  2:738897‑M2/235‑1 (MQ=255)
        ttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGAACATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGAGCCGATCATCAGTCCGGAAAAGAACGTCTGGCGGa                                                                                                                                                                                                                                                                  >  1:482322‑M2/46‑289 (MQ=255)
          gctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAg                                                                                                                                                                                                                                                                <  2:272873‑M2/246‑1 (MQ=255)
          gctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCCAACGTCAGTCAGGAACAGAACGTCTGGCGGAAg                                                                                                                                                                                                                                                                >  2:1678964‑M2/44‑289 (MQ=255)
           ctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGGTGAAGCCGCTGGCGGCGAAGTATGTCTGACGCGCGCCGATCATCAGGCAGGAACAGAACGTCTGGCGGAagg                                                                                                                                                                                                                                                               >  2:661483‑M2/43‑288 (MQ=255)
                         ccgagtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATgcg                                                                                                                                                                                                                                                 <  2:820503‑M2/261‑1 (MQ=255)
                           gcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCa                                                                                                                                                                                                                                               <  2:1796570‑M2/263‑1 (MQ=255)
                             gtgctgactgctgattagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCAtt                                                                                                                                                                                                                                             <  1:1727103‑M2/265‑1 (MQ=255)
                                    ctgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcgac                                                                                                                                                                                                                                      <  1:1011456‑M2/272‑1 (MQ=255)
                                    ctgctgatgagagaaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcgac                                                                                                                                                                                                                                      <  1:1659438‑M2/272‑1 (MQ=255)
                                           tgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACgg                                                                                                                                                                                                                               >  1:1687582‑M2/11‑289 (MQ=255)
                                             agagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTCGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTg                                                                                                                                                                                                                             >  2:222970‑M2/9‑289 (MQ=255)
                                               agtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGaca                                                                                                                                                                                                                                  <  2:1560170‑M2/276‑1 (MQ=255)
                                               agtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGaca                                                                                                                                                                                                                                  >  1:1560170‑M2/7‑282 (MQ=255)
                                                 taaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCg                                                                                                                                                                                                                         >  2:528084‑M2/5‑289 (MQ=255)
                                                    cgcttgggTTTTGTTCGCATTATGCCCGCGCGTTACGCGTCCTCGCGTCTGCCCGGTAAGCCATTGGTTGATATTTACGGCAAACCCATGATTGTTCATGTTCTTGAGCGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAGCCGATCATGAGGATGTTGCCCGCGCAGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCAGATCATCAGTCAGGAACAGAACGTCTGGCTGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                      <  2:732542/282‑1 (MQ=255)
                                                    aTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                      <  1:393160‑M2/288‑1 (MQ=255)
                                                        tGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtgt                                                                                                                                                                                                                  >  2:1187405/1‑289 (MQ=255)
                                                         gAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCCGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTCGCGGAAGTTGTCGAAAAAAGCGACTTCAGCGACGACACGCTGATCGTTACtgg                                                                                                                                                                                                                  >  2:150010/1‑287 (MQ=255)
                                                         gAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGGTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGGCTTCCGCGACGACACGGTGATCGTTAAtgt                                                                                                                                                                                                                  >  2:1151190/1‑288 (MQ=255)
                                                            ttttGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                               <  1:1664296/288‑1 (MQ=255)
                                                               tgtgGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGt                                                                                                                                                                                                           >  1:574292/1‑289 (MQ=255)
                                                                 tgGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtga                                                                                                                                                                                                         >  1:791379/1‑289 (MQ=255)
                                                                    ccATTCTTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAACACATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                       <  2:1095293/287‑1 (MQ=255)
                                                                          ttCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCgat                                                                                                                                                                                                <  1:528084/289‑1 (MQ=255)
                                                                             ccGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGaca                                                                                                                                                                                                                                  >  1:1483430/1‑252 (MQ=255)
                                                                              cgcgcgCTACGCGTCCACGCGTCTGCCCTGTAAACCATTGCTTGATATTAACGGCAAACCCTTGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATc                                                                                                                                                                                            <  1:1043083/289‑1 (MQ=255)
                                                                              cgcgcgCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCgatgat                                                                                                                                                                                             >  1:685974/1‑288 (MQ=255)
                                                                                cgcgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATcc                                                                                                                                                                                           >  2:903866/1‑288 (MQ=255)
                                                                                cgcgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCAGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGGTAATGTGCAGGGAGATGAACCGATGATc                                                                                                                                                                                            >  1:462567/1‑287 (MQ=255)
                                                                                    cTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCg                                                                                                                                                                                      >  2:1275546/1‑289 (MQ=255)
                                                                                      ccgcgTCCACGCGTCTGCCCGGTAAACCATTGTTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATTATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGAc                                                                                                                                                                                    <  1:1018264/288‑1 (MQ=255)
                                                                                      aCGCGGCCACGCGGCTGCCCGGTAAACCATGTGTGGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGAc                                                                                                                                                                                    <  2:37847/289‑1 (MQ=255)
                                                                                             cACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAACTGCGCATTCAGCGACGCAACGGCGATCGCTCAGGTGCAGGGTGATGAACCGATGATTCCTGCGaacagcgt                                                                                                                                                                              >  2:1690151/1‑281 (MQ=255)
                                                                                               cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCg                                                                                                                                                                           >  2:423306/1‑289 (MQ=255)
                                                                                               cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTAGGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCCGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGCTGATCCCTGCGCCACTCATTc                                                                                                                                                                            >  1:1601730/1‑288 (MQ=255)
                                                                                                            tAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGCTCGGTAATGTGCAGGGCGATGACCCGATTATCCCTGCGACAAACAATCGTCAGGTTGCTGAt                                                                                                                                                              >  2:1538470/1‑289 (MQ=255)
                                                                                                                    tGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGt                                                                                                                                                                                                                              <  2:91615/217‑1 (MQ=255)
                                                                                                                    tGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGt                                                                                                                                                                                                                              >  1:91615/1‑217 (MQ=255)
                                                                                                                     ggTTAATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGGCGGCGTGAATCAGGTGCCGGGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCt                                                                                                                                                     <  2:570222/289‑1 (MQ=255)
                                                                                                                           tatTAACGGCAAACCCATGATTGTTCATGTTCTGGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGt                                                                                                                                               <  2:1222391/289‑1 (MQ=255)
                                                                                                                                       aCCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATg                                                                                                                                   <  1:1512301/289‑1 (MQ=255)
                                                                                                                                                  ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGt                                                                                                                                               <  2:1335720/266‑1 (MQ=255)
                                                                                                                                                  ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAAACTCGCTCAGAGTCAGGTGGGTATGGCGACGCTGGc                                                                                                                        >  1:1863006/1‑289 (MQ=255)
                                                                                                                                                  ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGCATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGc                                                                                                                        >  1:1705006/1‑289 (MQ=255)
                                                                                                                                                  ttCATGTTCTTGAACGCGCGAGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGc                                                                                                                        >  1:410700/1‑289 (MQ=255)
                                                                                                                                                   tCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCAGCTGGCGGTGAAGCATGTATGACGCGCGCCGATCATCAGTCAGGAACCGAACGCATGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGCTCGTTAATGGTCAGGGTGATGAACCTATGATCCCTGCGACGATCATTCGTCCGGCTGCTGATTACCACGCCCAGCGTCAGGCTGATACGGCGActcctgcc                                                                                                                       >  2:706180/1‑284 (MQ=255)
                                                                                                                                                    cATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCgg                                                                                                                      <  1:656740/289‑1 (MQ=255)
                                                                                                                                                      tGTTCTTGACCGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTg                                                                                                                    <  1:192994/289‑1 (MQ=255)
                                                                                                                                                            tGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGTGATGGCGACTCTGGCGGGGCCaac                                                                                                               >  2:1227314/1‑287 (MQ=255)
                                                                                                                                                               ccgcgcgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCca                                                                                                            <  1:701600/287‑1 (MQ=255)
                                                                                                                                                                 gcgcgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACaa                                                                                                         <  1:903866/289‑1 (MQ=255)
                                                                                                                                                                   gcgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCCGGTGGGTATGGCGACTCTGGCGGTTCCCATcccacat                                                                                                        >  2:1657788/1‑283 (MQ=255)
                                                                                                                                                                               ggtgCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGt                                                                                           >  2:931536/1‑289 (MQ=255)
                                                                                                                                                                               ggtgCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGt                                                                                           >  1:1150290/1‑289 (MQ=255)
                                                                                                                                                                                    cGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTaa                                                                                       >  1:365190/1‑288 (MQ=255)
                                                                                                                                                                                                     cAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGt                                                                                                                                                                     >  1:777863/1‑193 (MQ=255)
                                                                                                                                                                                                     cAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGt                                                                                                                                                                     <  2:777863/193‑1 (MQ=255)
                                                                                                                                                                                                       aCCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCCCCGCGTCAGGTGGGTATGGCGACTCTGGCGGTACCAATCCACAATGCGGAAGCAGCGTTTAACCCGACTGCGGGTAAAGTgg                                                                   >  2:1416906/1‑289 (MQ=255)
                                                                                                                                                                                                             cATGAGGCTGTTGCCCGCGCCGTGGACGCCGCTGGCGGGGAAGTTTGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCg                                                             <  2:456712/289‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGaa                                                     >  2:392373/1‑289 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                      <  1:1434415/288‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                      <  1:1538470/288‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                      <  1:1428973/288‑1 (MQ=255)
                                                                                                                                                                                                                         gCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                                 <  1:274093/289‑1 (MQ=255)
                                                                                                                                                                                                                         gCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                                 <  1:1591767/289‑1 (MQ=255)
                                                                                                                                                                                                                          cccGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                               >  2:1593286/1‑130 (MQ=255)
                                                                                                                                                                                                                          cccGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                                 <  1:834775/288‑1 (MQ=255)
                                                                                                                                                                                                                          cccGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTa                                                >  2:483383/1‑289 (MQ=255)
                                                                                                                                                                                                                           ccGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTAt                                               >  1:1102386/1‑289 (MQ=255)
                                                                                                                                                                                                                            cgcgCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATg                                              <  1:291817/289‑1 (MQ=255)
                                                                                                                                                                                                                              cgcCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGc                                             >  1:1170664/1‑288 (MQ=255)
                                                                                                                                                                                                                               tgcGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                            <  2:1432060/286‑1 (MQ=255)
                                                                                                                                                                                                                               gcccgtGAAGCGGCTGGCGGTGAAGTAGGTAGGAAGCGGGCCGATCATCAGGCAGGAAAAGAACGTCTGGCGGAAGGTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCAc                                           <  2:1874170/284‑1 (MQ=255)
                                                                                                                                                                                                                               gcCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                            <  1:1791144/288‑1 (MQ=255)
                                                                                                                                                                                                                               gcCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                            <  2:791379/288‑1 (MQ=255)
                                                                                                                                                                                                                               gcCGTTGAAGCCGCTGGCGGGGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                            <  2:311122/288‑1 (MQ=255)
                                                                                                                                                                                                                                        gCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGtt                                                                                                                                                                                                                       >  1:1235465/1‑108 (MQ=255)
                                                                                                                                                                                                                                          cGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTtctct                                <  2:685974/289‑1 (MQ=255)
                                                                                                                                                                                                                                          cGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCGCGACGCTGAAGGGTATGCACTGTACTtctct                                <  1:341609/289‑1 (MQ=255)
                                                                                                                                                                                                                                             tGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACTGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCCGCGACGACCCGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCAAAATGCGGAAGAAGCGTTTAAACCGAATGCGGTGAAGGTGGTTCTCGACGCTGAGGGGTATGGATTGCACTtcgctcgc                             >  2:184492/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCCCGACGCTGAAGGGTATGCCCTGTACGTCTCTcg                              >  2:509514/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   tGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGccac                        <  1:222970/288‑1 (MQ=255)
                                                                                                                                                                                                                                                    gAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGccacca                      <  2:1102386/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         atgtatgACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCt                 >  2:1363349/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                aCGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                               >  2:1469245/1‑92 (MQ=255)
                                                                                                                                                                                                                                                                aCGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGa                                                                                                                                                               <  1:592000/140‑1 (MQ=255)
                                                                                                                                                                                                                                                                aCGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGa                                                                                                                                                               >  2:592000/1‑140 (MQ=255)
                                                                                                                                                                                                                                                                 cgcgcgCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                               >  2:944764/1‑91 (MQ=255)
                                                                                                                                                                                                                                                                 cgcgcgCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                               <  1:944764/91‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cgcgcgCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcg         >  1:516800/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  gcgcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                      <  1:762232/243‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGGATGCACTGTACTTCTCTCGCGCCACCATTCATTGGgctcgtga      >  2:1300952/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCGATCATCAGTTAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtga      >  1:129263/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTggg             <  2:161075/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTggg             >  1:161075/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtga      >  1:950755/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     cgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtga      >  1:138718/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        cGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtgatcgt  >  1:719114/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        cGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtgatcg   <  1:1330413/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                    
GTGCTGACTGCTGATGAGAGTAAAAGTTGATGTAAACTGCTGATGAGAGTAAATCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAAGTGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGAGTGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATCGT  >  CP042583/833720‑834272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A