Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 833,994 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583833,9940AT99.7% 741.0 / NA 312intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (160/151);  minor base G (0/1);  total (160/152)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583833,9950GC99.7% 738.7 / NA 312intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (159/151);  total (160/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583833,9960TA99.4% 737.6 / NA 312intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (159/151);  minor base C (1/1);  total (160/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 312 total aligned reads displayed.

GCGTGCTGACTGCTGATGAGAGTAAAAGTTGATGTAAACTGCTGATGAGAGTAAATCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAAGTGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGAGTGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATC  >  CP042583/833718‑834270
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                  
cattccagtgttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTGCGGAACAGAAc                                                                                                                                                                                                                                                                          >  2:508232‑M2/56‑289 (MQ=255)
  ttccagtgttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACg                                                                                                                                                                                                                                                                         >  1:836380‑M2/54‑288 (MQ=255)
  ttccagtgttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGGGAAGTATGTATGACGCGCGCCGATCAGCAGTCAGGAACAGAACg                                                                                                                                                                                                                                                                         >  1:521720‑M2/54‑288 (MQ=255)
          ttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATTATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTTCCGAGCGCATCATCCTGGCAACCGATCCTGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGACGTAGGTATGCAGCCCGCCCACCCTCCGTCAGGACCGGAACGACTGGCGGa                                                                                                                                                                                                                                                                >  2:1826513‑M2/46‑289 (MQ=255)
          ttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCGGCGCCGTTGAAGCCGCTGGCGGGGAAGTATGTATGACGCGCGCCGATCATCATTCAGGAACAGAACGTCTTGCGGa                                                                                                                                                                                                                                                                >  1:1067293‑M2/46‑289 (MQ=255)
          ttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGa                                                                                                                                                                                                                                                                >  1:429984‑M2/46‑289 (MQ=255)
                       aagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGaaaaa                                                                                                                                                                                                                                                   >  1:1173157‑M2/33‑289 (MQ=255)
                            cgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATgcgc                                                                                                                                                                                                                                              >  2:613806‑M2/28‑289 (MQ=255)
                                   tgactgcggataagatgaaaTCATGAGTTTTGTGGTCATTATACCCGCGCGCTACGCGTCCACGCGTTTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGc                                                                                                                                                                                                                                       <  2:1062740‑M2/269‑1 (MQ=255)
                                    gactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGGGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcg                                                                                                                                                                                                                                      <  2:1186952‑M2/270‑1 (MQ=255)
                                      ctgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcgac                                                                                                                                                                                                                                    <  1:401232‑M2/272‑1 (MQ=255)
                                        gcggatgagggtaaaTCATTGGTTTTGTGGTCATTATCCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATGGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTGGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcgacga                                                                                                                                                                                                                                  <  2:1859575‑M2/274‑1 (MQ=255)
                                          tgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGAGCATCAGTCAGGACAAGAACGTCTGGCGGAGGGTGTGGAAAAATGAGCCTGCAGc                                                                                                                                                                                                                                       >  2:415651‑M2/14‑282 (MQ=255)
                                               agagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTg                                                                                                                                                                                                                           >  1:301817‑M2/9‑289 (MQ=255)
                                                     aacacggAGGTTTGTGGTCATTATTCCCGCGAGCTACACGTCCACGCGTCTGCCCGATAAACCATTGGTTGATATTAACGGCGAACCTATGATTGTTCATGGTCTTGAGCGCGGGGGAGAATCAGGGGCCGAGCGCATCATCGTGGCAACCGGTCATGAGGATGTTGCCCGGGGCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGTCGATCATCAGTCAGGAACAGAACGGCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGtt                                                                                                                                                                                                                     <  2:264491/283‑1 (MQ=255)
                                                      aTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGACGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGCAGTTGTCGAAAAATGCGCATTCAGCGACGAACCGGtgatcctga                                                                                                                                                                                                                    >  2:775708‑M2/2‑285 (MQ=255)
                                                      aTCATGAGTTTGGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                    <  1:638572‑M2/288‑1 (MQ=255)
                                                               tttGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             <  1:1292119/287‑1 (MQ=255)
                                                               tttGTGGTCATTATTCCCGCGAGCTAGGCGTCCACGGGTCTGCCCGGTAAACCATGGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             <  1:1045571/287‑1 (MQ=255)
                                                                 tgtgGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGt                                                                                                                                                                                                         >  1:340427/1‑289 (MQ=255)
                                                                      tCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                     <  1:1187078/288‑1 (MQ=255)
                                                                                  cgcgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGCAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATcc                                                                                                                                                                                         >  2:68315/1‑288 (MQ=255)
                                                                                  cgcgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             >  2:1093562/1‑268 (MQ=255)
                                                                                  cgcgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATc                                                                                                                                                                                          >  1:2027895/1‑287 (MQ=255)
                                                                                    cgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             >  1:1856195/1‑266 (MQ=255)
                                                                                      cTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACg                                                                                                                                                                                                                              >  2:2027116/1‑247 (MQ=255)
                                                                                       tACGCGTCCCCTCGTCTGCCCGGTAAACCATTGGTTGATATGAACCGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAt                                                                                                                                                                                                                  <  2:1401306/258‑1 (MQ=255)
                                                                                        aCGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGGTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGAc                                                                                                                                                                                  <  1:681845/289‑1 (MQ=255)
                                                                                            gTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAAt                                                                                                                                                                               <  1:2189898/288‑1 (MQ=255)
                                                                                               cACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCAtt                                                                                                                                                                                                                                           <  1:964418/225‑1 (MQ=255)
                                                                                               cACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCAt                                                                                                                                                                            >  1:1245072/1‑288 (MQ=255)
                                                                                               cACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGAGTTCGGCGACGGCACGGTTAACGTTAATGTGCAGGGTGAGGAACCGAGGATCCCTGACACAATCAt                                                                                                                                                                            >  2:1604297/1‑288 (MQ=255)
                                                                                                 cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGt                                                                                                                                                                                                                            >  2:1472036/1‑238 (MQ=255)
                                                                                                 cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGt                                                                                                                                                                                                                            <  1:1472036/238‑1 (MQ=255)
                                                                                                 cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGtt                                                                                                                                                                                                                     <  1:193182/245‑1 (MQ=255)
                                                                                                 cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCg                                                                                                                                                                         >  2:2051076/1‑289 (MQ=255)
                                                                                                 cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAAACCATGATTGTTCATGTTCTTGAACGAGCGCGTGAATAAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGATGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAAAGTCTGGAGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGGGATCGTTAATGAGCAGGGtg                                                                                                                                                                                                        >  1:1401306/1‑258 (MQ=255)
                                                                                                  gcgTCTGCCCGGTAAGCCATGGCTGGCTAGTACCGGCAAACCCAGGATTGTTGATGTTCTTGTACGCGCCCGGGAATCCGGTGCCGAGCGCATCATCGTGGCAACCGATCATGGGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCAGCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGt                                                                                                                                                                        <  2:1927561/289‑1 (MQ=255)
                                                                                                   cgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAACCATTCGTc                                                                                                                                                                       >  1:596737/1‑289 (MQ=255)
                                                                                                       tGCCCGGTGAGCCATTGGTTGATATTACCGGCAGACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAGCAAGTGCCGTGCGCATCATCGTGGCAACCGGTCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACTCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTTATCGTTGATGTTCAGGGTGATGAGCCGATGATCCCTGCGACAATCATTCGTCAGGt                                                                                                                                                                   <  2:1630395/289‑1 (MQ=255)
                                                                                                       tGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                    <  1:178863/240‑1 (MQ=255)
                                                                                                             gTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                     >  1:2103282/1‑249 (MQ=255)
                                                                                                              tAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCATCGACGACACGGTGATCGTTAATGTGCAGGGGGATGAACCGATGATCCCTGCTACAATCATTCGTACGGTTGCTGAt                                                                                                                                                            >  2:2162772/1‑289 (MQ=255)
                                                                                                              tAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGa                                                                                                                                                             <  2:429984/288‑1 (MQ=255)
                                                                                                                      tGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                    >  2:1305642/1‑225 (MQ=255)
                                                                                                                       ggTTGTTATTAACGGAAAGCCCAGGATGGTTCATGTTCTTGACGGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAGCCGATCATGAGGATGTTGCGCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCt                                                                                                                                                   <  2:1242930/289‑1 (MQ=255)
                                                                                                                        gTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCt                                                                                                                                                   <  2:1368785/288‑1 (MQ=255)
                                                                                                                            atatTAACGGCAAACCCATGATTGTTCATGTTCTTGTACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGc                                                                                                                                                    <  2:1740237/283‑1 (MQ=255)
                                                                                                                            atatTAACGGCAAACCCATGATTGTTCATGTTCTTGTACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGc                                                                                                                                                    >  1:1740237/1‑283 (MQ=255)
                                                                                                                                  aCGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGGGAt                                                                                                                                                                                                                         >  2:117459/1‑208 (MQ=255)
                                                                                                                                       aaaCCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGTGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATCCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACATGCATTCGCCAGGTGGCGGATAATCTCTCTAAGGTTCAGGTGGGTa                                                                                                                                   >  2:1144175/1‑289 (MQ=255)
                                                                                                                                              tGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGa                                                                                                                             >  2:1579517/1‑288 (MQ=255)
                                                                                                                                                    ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCgat                                                                                                                                                                                              >  2:86665/1‑217 (MQ=255)
                                                                                                                                                    ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGc                                                                                                                               <  2:1915585/280‑1 (MQ=255)
                                                                                                                                                    ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGc                                                                                                                      >  2:60087/1‑289 (MQ=255)
                                                                                                                                                    ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGAGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACGGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGAAAACCTCGCTCAGGGTCAGGTGGGTACTGCGaactgggc                                                                                                                      >  2:55746/1‑282 (MQ=255)
                                                                                                                                                     tcgtGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAgg                                                                                                                                                                    >  1:1174951/4‑242 (MQ=255)
                                                                                                                                                     tCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGc                                                                                                                      <  1:613806/288‑1 (MQ=255)
                                                                                                                                                        tGTTATTGAACGCGCGCGTGAATCAGGGGCCGGGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAGGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTg                                                                                                                  <  2:340427/289‑1 (MQ=255)
                                                                                                                                                         gTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTg                                                                                                                  >  1:1009008/1‑288 (MQ=255)
                                                                                                                                                                      cgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                    >  2:2247895/1‑177 (MQ=255)
                                                                                                                                                                      cgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             <  1:1654932/184‑1 (MQ=255)
                                                                                                                                                                      cgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGc                                                                                                    >  1:1632678/1‑289 (MQ=255)
                                                                                                                                                                       gcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCg                                                                                                   >  1:1438911/1‑289 (MQ=255)
                                                                                                                                                                                 ggtgCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGAct                                                                                                                           <  2:641999/255‑1 (MQ=255)
                                                                                                                                                                                   tgCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGttt                                                                                       >  2:713491/1‑289 (MQ=255)
                                                                                                                                                                                        aGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGt                                                                                                                                                                                                                            <  1:693478/151‑1 (MQ=255)
                                                                                                                                                                                        aGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCt                                                                                                                                                       >  1:2006383/1‑220 (MQ=255)
                                                                                                                                                                                        aGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAAccg                                                                                  >  1:2059908/1‑288 (MQ=255)
                                                                                                                                                                                        aGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAAccc                                                                                  >  2:2232930/1‑289 (MQ=255)
                                                                                                                                                                                        aGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAAccc                                                                                  >  1:1911396/1‑289 (MQ=255)
                                                                                                                                                                                        aGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAAccc                                                                                  >  1:3197/1‑289 (MQ=255)
                                                                                                                                                                                                 tcGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGt                                                                         <  1:2172172/289‑1 (MQ=255)
                                                                                                                                                                                                               catggggtgggtGCCCGTGCAGTTGGAGCCGCGGGCTGTGAAGGATGTAAGACCCGCGCCTATCATCAGTAAGGCACAGAACGTCGGGCGGATGTTGTGGAAAAATGCGCAATCAGCTACGAAACGGTGATCGGTAATGTGCAGGCTGATGAGCCGATGATCCCAACGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGAGTATGGCGAGTCGGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTcgcg                                                           <  2:1873943/278‑1 (MQ=255)
                                                                                                                                                                                                               cATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCg                                                           <  2:462467/289‑1 (MQ=255)
                                                                                                                                                                                                                     gATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCt                                                      <  1:55746/288‑1 (MQ=255)
                                                                                                                                                                                                                     gATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTg                                                     >  1:1870003/1‑289 (MQ=255)
                                                                                                                                                                                                                       tgtgGCCCGGGCCTTTAGGGCCGCTGGCGGGGAAGTATGTAGGACGCGCACGGATCATCAGTCCGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCGGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  2:2000390/288‑1 (MQ=255)
                                                                                                                                                                                                                       tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  1:1490866/288‑1 (MQ=255)
                                                                                                                                                                                                                       tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  1:2234957/288‑1 (MQ=255)
                                                                                                                                                                                                                          tGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAggg                                                >  1:651358/1‑289 (MQ=255)
                                                                                                                                                                                                                          tGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAggg                                                >  1:2148925/1‑289 (MQ=255)
                                                                                                                                                                                                                             ccGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTAt                                             >  2:1976174/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gcCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                          <  1:1579517/288‑1 (MQ=255)
                                                                                                                                                                                                                                               tGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTcgc                           >  1:1355581/1‑289 (MQ=255)
                                                                                                                                                                                                                                               tGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTcg                            <  1:255082/288‑1 (MQ=255)
                                                                                                                                                                                                                                                ggCGGTGAAGGATGTATGGCGCGCGCCGATCAACAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTcgc                           <  2:1431468/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     tGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGccac                      <  1:1336059/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       aaGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGCATGGCGACCCTGGCGGTGCCAATCCACAATCCGGCAGAAGCGTTGAACACGAATGCGGTGAAAGTGGTTCTCGACGCGGAAGGGTATGCCCGGTACGTCTCTCCAGCCGCCAt                   >  2:1489018/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           atgtatgACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTcc                <  1:347962/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           atggatgACGCGCGCCGAATACCGCGCAGGAAAAGAACGGCTGGCCGAAGTTGTCGAAAAATGCGCATTCAGCGACGGCACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTACCCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTcc                <  2:228665/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               atgACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGa                                                                       <  1:1419247/229‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cgcgcgCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGAAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcg       >  2:678005/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    gcgcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCt                                                      >  2:308563/1‑241 (MQ=255)
                                                                                                                                                                                                                                                                      gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    >  1:2257206/1‑241 (MQ=255)
                                                                                                                                                                                                                                                                      gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  1:281626/241‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  1:111923/241‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtga    <  2:347303/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGgatcgtga    >  2:1530123/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        gcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAAGGCGGCAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCCCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCCTTCCTTGGggtcgtgagc  >  2:2142870/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                  
GCGTGCTGACTGCTGATGAGAGTAAAAGTTGATGTAAACTGCTGATGAGAGTAAATCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAAGTGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGAGTGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATC  >  CP042583/833718‑834270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A