Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 833,994 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583833,9940AT99.5% 880.9 / NA 368intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (181/184);  minor base G (1/1);  total (183/185)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583833,9950GC99.5% 882.8 / NA 368intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (183/183);  minor base A (0/2);  total (183/185)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583833,9960TA99.5% 880.9 / NA 368intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (183/183);  minor base C (0/2);  total (183/185)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 368 total aligned reads displayed.

GTGCTGACTGCTGATGAGAGTAAAAGTTGATGTAAACTGCTGATGAGAGTAAATCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAAGTGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGAGTGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATC  >  CP042583/833720‑834270
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                  
ttccagtgttgctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGt                                                                                                                                                                                                                                                                        <  2:111008‑M2/236‑1 (MQ=255)
          gctggaaacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAg                                                                                                                                                                                                                                                              <  1:2219653‑M2/246‑1 (MQ=255)
                aacggaagcccgcgtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCg                                                                                                                                                                                                                                                        >  1:768260‑M2/38‑289 (MQ=255)
                             gtgctgactgctgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCAtt                                                                                                                                                                                                                                           <  1:2204324‑M2/265‑1 (MQ=255)
                                 tagctgctgatgagagttaaTCATGAGTTTTGTGGCCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTCAACCATTGGTTGATATTAACGGCAAGCCAATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGACGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAg                                                                                                                                                                                                                                        <  1:1129866‑M2/268‑1 (MQ=255)
                                   tttaagaccagggttaaaTCATGAGTTTTTTGTTCTTTATTCCCCCGCGCTACGAGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGAGTGAATCAGGTGCCGGGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcga                                                                                                                                                                                                                                     <  2:1177609‑M2/271‑1 (MQ=255)
                                        tgatgagagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGaca                                                                                                                                                                                                                                <  1:643357‑M2/276‑1 (MQ=255)
                                             agagtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTg                                                                                                                                                                                                                           >  1:2430686‑M2/9‑289 (MQ=255)
                                               agtaaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGa                                                                                                                                                                                                                          >  1:943414‑M2/7‑288 (MQ=255)
                                                 taaaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCg                                                                                                                                                                                                                       >  1:2703169‑M2/5‑289 (MQ=255)
                                                   aaTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGtt                                                                                                                                                                                                                     <  1:300107‑M2/287‑1 (MQ=255)
                                                    aTCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                    <  2:1020070‑M2/288‑1 (MQ=255)
                                                        tGAGTTTTGTAGACAGTATTCGCGCGCGCTACGCATCCACGAGTCGGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtg                                                                                                                                                                                                                 <  2:327929/288‑1 (MQ=255)
                                                         gAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtgtg                                                                                                                                                                                                               <  1:2354851/289‑1 (MQ=255)
                                                         gAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtgt                                                                                                                                                                                                                >  1:844000/1‑288 (MQ=255)
                                                           gTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             <  2:1244353/289‑1 (MQ=255)
                                                           gTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             <  2:768260/289‑1 (MQ=255)
                                                                    tCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                     <  1:2286762/288‑1 (MQ=255)
                                                                    tCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                     <  1:586847/288‑1 (MQ=255)
                                                                      attattCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtgtg                                                                                                                                                                                                               <  1:1161863/276‑1 (MQ=255)
                                                                      attattCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGaa                                                                                                                                                                                                   >  1:1248569/1‑288 (MQ=255)
                                                                                cgcgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGGTAATGTGCAGGGTGATGAACCGATGATc                                                                                                                                                                                          >  1:2442153/1‑287 (MQ=255)
                                                                                  cgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGt                                                                                                                                                                                                                            <  2:1700275/251‑1 (MQ=255)
                                                                                  cgcTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTa                                                                                                                                                                                                                    <  1:1520669/259‑1 (MQ=255)
                                                                                       cgcgTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                     <  1:1038912/269‑1 (MQ=255)
                                                                                               cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGAt                                                                                                                                                                                                                         >  1:1367810/1‑241 (MQ=255)
                                                                                               cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGAt                                                                                                                                                                                                                         <  2:1367810/241‑1 (MQ=255)
                                                                                               cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCg                                                                                                                                                                         >  1:1017650/1‑289 (MQ=255)
                                                                                               cgcgTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCg                                                                                                                                                                         <  2:1574437/289‑1 (MQ=255)
                                                                                                  gTCTGCCCGGTAAACCATTGGTTGATATTACCGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTAAGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTc                                                                                                                                                                       <  1:80817/288‑1 (MQ=255)
                                                                                                  gTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGGCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAACCAttgctca                                                                                                                                                                      >  2:1261626/1‑284 (MQ=255)
                                                                                                    cTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAgg                                                                                                                                                                    <  2:844000/289‑1 (MQ=255)
                                                                                                     tGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtgtg                                                                                                                                                                                                               >  1:986296/1‑245 (MQ=255)
                                                                                                            tAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGcga                                                                                                                                                                                                                                     >  1:1571933/1‑216 (MQ=255)
                                                                                                              aaCCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGtgatg                                                                                                                                                                                                     >  2:1634130/1‑246 (MQ=255)
                                                                                                                 cATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAAcc                                                                                                                                                        >  1:1236894/1‑288 (MQ=255)
                                                                                                                    tGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGaca                                                                                                                                                                                                                                <  2:379916/213‑1 (MQ=255)
                                                                                                                    tGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTc                                                                                                                                                      >  1:1185233/1‑287 (MQ=255)
                                                                                                                           tatTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCt                                                                                                                                                   >  1:1104100/1‑283 (MQ=255)
                                                                                                                                            tGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTCCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCg                                                                                                                              >  1:226378/1‑287 (MQ=255)
                                                                                                                                                  ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCt                                                                                                                                                   <  1:695323/260‑1 (MQ=255)
                                                                                                                                                  ttCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGc                                                                                                                      >  1:1747002/1‑289 (MQ=255)
                                                                                                                                                  ttCATGTGCTTGAACGGGCGCGTGAAGCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGc                                                                                                                      <  2:2430686/289‑1 (MQ=255)
                                                                                                                                                   tCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCg                                                                                                                     >  1:2079039/1‑289 (MQ=255)
                                                                                                                                                    cATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCgg                                                                                                                    <  1:35090/289‑1 (MQ=255)
                                                                                                                                                    cATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCgg                                                                                                                    >  1:1610758/1‑289 (MQ=255)
                                                                                                                                                          cTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCaa                                                                                                              >  2:2215180/1‑289 (MQ=255)
                                                                                                                                                          cTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCa                                                                                                               >  2:710783/1‑288 (MQ=255)
                                                                                                                                                          cTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTCGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACCGTGAGCGTCAATGTTCAGGGTGATGAACCGAATATCCCTCCGACAATCCTTCGTCAGGTTGCTGAAAACCTCGCTCAGCGTCAGGCTGGTATGGCGACTCGGGCGGTGCCaa                                                                                                              >  1:2554111/1‑289 (MQ=255)
                                                                                                                                                            tGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAAt                                                                                                             >  1:1705503/1‑288 (MQ=255)
                                                                                                                                                               ccgcgcgcgTGAAGCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCca                                                                                                          <  1:1847986/287‑1 (MQ=255)
                                                                                                                                                                    cgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGc                                                                                                    >  1:660075/1‑289 (MQ=255)
                                                                                                                                                                    cgcgTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGc                                                                                                    >  1:542273/1‑289 (MQ=255)
                                                                                                                                                                                 tgCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGa                                                                                                                                                             <  1:501701/219‑1 (MQ=255)
                                                                                                                                                                                   ccGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTgg                                                                                                                       <  2:2449322/255‑1 (MQ=255)
                                                                                                                                                                                   ccGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCgg                                                                                                                    <  2:681025/258‑1 (MQ=255)
                                                                                                                                                                                           atcatcGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACAGATGATCCCTGCGACAATCATGCGTCAGGTTGCGGAGAACCTCGCt                                                                                                                                                   >  2:501701/1‑219 (MQ=255)
                                                                                                                                                                                                 gTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGa                                                                       <  1:598610/289‑1 (MQ=255)
                                                                                                                                                                                                  tGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGaa                                                                                                                                                                                                   <  1:404417/164‑1 (MQ=255)
                                                                                                                                                                                                  tGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGaa                                                                      >  1:1276858/1‑289 (MQ=255)
                                                                                                                                                                                                     cAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAg                                                                    <  2:2221830/288‑1 (MQ=255)
                                                                                                                                                                                                       aCCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             <  2:2502995/149‑1 (MQ=255)
                                                                                                                                                                                                       aCCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCa                                                                                                                                                                                                             >  1:2502995/1‑149 (MQ=255)
                                                                                                                                                                                                         cGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGt                                                                >  2:106714/1‑288 (MQ=255)
                                                                                                                                                                                                           aTCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCca                                                                                                          >  2:1147739/1‑244 (MQ=255)
                                                                                                                                                                                                            tCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTtct                                                             <  1:2591306/288‑1 (MQ=255)
                                                                                                                                                                                                             cATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCg                                                           <  1:320859/289‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAgg                                                                                                                                         <  2:1411493/203‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAgg                                                                                                                                         >  1:1411493/1‑203 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  1:2044325/288‑1 (MQ=255)
                                                                                                                                                                                                                     tGTTGCCCGCGCCGGTGAGGCCGCTGGCGGGGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  2:2613135/288‑1 (MQ=255)
                                                                                                                                                                                                                     ggtggCCCGCGCCGGTGAAGCCGCAGGCGGTGAGGTAAGTATGGACG‑GCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  2:1871804/284‑1 (MQ=255)
                                                                                                                                                                                                                      gTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGATGTACGTAT‑GACGCGCGCCGACCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAACAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTAGCTGATAACCTCGCCCAGCGTCAGCTGGGTATGGCGACTGTGGCGGTGCCAATCCACAATGCGGAAGAAGCGCTTAACCCGTATTCGGTGCAAGTTGTTCTCGACGCTGGAg                                                  >  2:599803/1‑289 (MQ=255)
                                                                                                                                                                                                                      gTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGa                                                                                                                                                             >  2:560838/1‑182 (MQ=255)
                                                                                                                                                                                                                      gTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGa                                                          >  2:2071249/1‑281 (MQ=255)
                                                                                                                                                                                                                      gTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAg                                                  >  1:2613135/1‑289 (MQ=255)
                                                                                                                                                                                                                          cccGCGCGGTTGAAGCCGCTGGCGGTGAAGTAGGGAG‑GCCGCGCGCCGATCATCAGGACGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATGCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGTGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                               <  2:2010294/288‑1 (MQ=255)
                                                                                                                                                                                                                          cccGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAAtgtg                                                                                                                                                                                                               <  1:2659262/128‑1 (MQ=255)
                                                                                                                                                                                                                          cccGCGCAGTTGAAGCCGCTGGCGGGGAAGTATGGAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTGGTCGAAAAATGCGCATTCAGCGACGAAACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                               <  1:2019120/288‑1 (MQ=255)
                                                                                                                                                                                                                          cccGAGCCGTTGGAGGCGCTGGCGGTGAAGGAGGGAG‑TAGGAGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGGCGACACGGTGATCGTTAATGTGCAGGTGGAGGAACCGATGATCCCTGGGACAATCATTCGTCAGGTTGCTGGTAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                               <  2:1443914/288‑1 (MQ=255)
                                                                                                                                                                                                                               gcCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                          <  1:1313185/288‑1 (MQ=255)
                                                                                                                                                                                                                                           gCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGt                                               <  1:1917372/271‑1 (MQ=255)
                                                                                                                                                                                                                                           gCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                          >  2:2362050/1‑276 (MQ=255)
                                                                                                                                                                                                                                           gCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTtctctc                             >  2:1488850/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGt                                                                                                                                                                        <  2:317271/148‑1 (MQ=255)
                                                                                                                                                                                                                                             tGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAgg                                                                                                                                                                    <  1:962975/152‑1 (MQ=255)
                                                                                                                                                                                                                                             tGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTcg                            <  2:1295515/288‑1 (MQ=255)
                                                                                                                                                                                                                                             tGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCGGCGACAATCATTCGTCAgg                                                                                                                                                                    >  2:962975/1‑152 (MQ=255)
                                                                                                                                                                                                                                                         atgtat‑gACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGACGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCa                                          >  2:2289507/1‑262 (MQ=255)
                                                                                                                                                                                                                                                         atgtat‑gACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTcc                <  1:1941949/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             at‑gACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTggg           <  2:2704676/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                gACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGCAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGgaaga                                                                                              >  2:1929071/1‑204 (MQ=255)
                                                                                                                                                                                                                                                                gACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACCGGACATCTCTCGCGCCACCATTCCTTGGga          >  2:2180621/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  cgcgcgCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGCCAGGTGGGTATGGCGACTCTGGCGGTGCGAATCCACAATGCTGAAGATGCGTTTAACCCGAAGCCGGCGAAAGTGGTTTCCGACGCTGAAGGGTATGCACTTTACCTCTCTCGCGCCCGCACTCATTGGgatcg       >  2:2269696/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   gcgcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGa                                                    <  2:175582/243‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gcgcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGccac                      >  2:608548/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                   gcgcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGccac                      <  1:608548/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCg                                                           >  2:2581936/1‑234 (MQ=255)
                                                                                                                                                                                                                                                                     gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAg                                                  <  2:474509/243‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gcgcCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAg                                                  >  1:474509/1‑243 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                  
GTGCTGACTGCTGATGAGAGTAAAAGTTGATGTAAACTGCTGATGAGAGTAAATCATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAAAGTGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTAT‑GACGCGCGCCGATCATCAGAGTGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATC  >  CP042583/833720‑834270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A