Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,931,810 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,931,8100AT100.0% 775.7 / NA 323intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (161/162);  total (161/162)
*CP0425831,931,8110CG99.7% 769.1 / ‑5.5 323intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (160/161);  minor base A (0/1);  total (161/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01
*CP0425831,931,8120TA99.7% 775.3 / NA 323intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (161/161);  minor base C (0/1);  total (161/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 323 total aligned reads displayed.

AAGCACACTTTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTACTACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGAGCTACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCACTAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCTTTGCGGATCCCCGCATCGC  >  CP042583/1931534‑1932090
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                      
aagcactgatttATGAATCCGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGa                                                                                                                                                                                                                                                                              <  1:763943/280‑1 (MQ=255)
       gatttATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGAtt                                                                                                                                                                                                                                                                       <  1:1363766/287‑1 (MQ=255)
        atttATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCCCCAGCCCACATCCGGCTGCATAATGTCGATACCGGTTTCTGACAGCGTACGAAAAGAtt                                                                                                                                                                                                                                                                       >  1:1599739/2‑288 (MQ=255)
        atttATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACACCCGGCTGCATAATGTAGATACCGGTTTCTGAAAGCGTACGAACAGAtt                                                                                                                                                                                                                                                                       >  2:1041332/2‑288 (MQ=255)
          ttATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCa                                                                                                                                                                                                                                                                    <  1:55472/289‑1 (MQ=255)
          ttATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCa                                                                                                                                                                                                                                                                    <  1:12567/289‑1 (MQ=255)
          tgaTGAATACGACCATTCACCGGAACCGGCTCATGGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCa                                                                                                                                                                                                                                                                    <  1:1676945/287‑1 (MQ=255)
               aaTACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCTGACGCATCGTTGAACAATCCGGGCTGTTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGtgtg                                                                                                                                                                                                                                                               <  1:44995/289‑1 (MQ=255)
                 tACGACAATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGcc                                                                                                                                                                                                                                                             <  2:1413873/289‑1 (MQ=255)
                  aCGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCg                                                                                                                                                                                                                                                            >  1:1332421/1‑289 (MQ=255)
                           cACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTTATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATCCCGGTTTCTGACAGCCTACGAAAAGATTGCTGTGTGCCGTGgcgccc                                                                                                                                                                                                                                                    >  2:1076694/1‑286 (MQ=255)
                           cACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTTCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTc                                                                                                                                                                                                                                                    >  1:1636457/1‑288 (MQ=255)
                            aCCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCAc                                                                                                                                                                                                                                                  <  1:652945/289‑1 (MQ=255)
                              cGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCCATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGGTCTCAcc                                                                                                                                                                                                                                                 >  2:721989/1‑288 (MQ=255)
                                gAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGTCGTGGTGCTCAcc                                                                                                                                                                                                                                                 >  2:321215/1‑286 (MQ=255)
                                   ccGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGt                                                                                                                                                                                                                                           <  1:229205/289‑1 (MQ=255)
                                   ccGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGAGTTGGCGATTGCGCCAATTTCCCCCAGCGTGGTTAAACCACCGCACCAGCCAACCTCCGGCTGCATAATGTCGATACCGCTTTCTGAAAGCTGACGAACAGATTGCAGTGTGCGTTGGTGCTCACCCCTGGt                                                                                                                                                                                                                                           >  2:1800596/1‑289 (MQ=255)
                                      gCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTg                                                                                                                                                                                                                                                                      >  2:524624/1‑259 (MQ=255)
                                        tCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGAcc                                                                                                                                                                                                                                       <  2:859743/288‑1 (MQ=255)
                                        tCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACca                                                                                                                                                                                                                                      <  1:321924/289‑1 (MQ=255)
                                          aTTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACcatc                                                                                                                                                                                                                                    >  1:935599/1‑289 (MQ=255)
                                           ttGAGCAGAATCGGGTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACcatca                                                                                                                                                                                                                                   >  1:591878/1‑289 (MQ=255)
                                                        ggTCAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGgcgc                                                                                                                                                                                                                      >  1:1155264/1‑289 (MQ=255)
                                                           cAAACTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCgcgtt                                                                                                                                                                                                                   <  2:968918/289‑1 (MQ=255)
                                                             aaCTGCGGACGCATCGTTGAACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGTCTGCATAATGTCGATACTGGTTTCTGAAAGCGTCACAAAAGATTGCAGTGTGCCGTGGTGCTAACCGCTGGTGACCATCATTCCGAATGGCgcgttgc                                                                                                                                                                                                                 >  2:394903/1‑289 (MQ=255)
                                                                          tcgttgaacAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTcgcg                                                                                                                                                                                                    <  1:276129/282‑1 (MQ=255)
                                                                          tcgttgaacAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTcgcg                                                                                                                                                                                                    <  1:696599/282‑1 (MQ=255)
                                                                            gttgaacAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  <  2:1339093/284‑1 (MQ=255)
                                                                            gttgaacAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  <  1:1081689/284‑1 (MQ=255)
                                                                            gttgaacAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  <  2:891181/284‑1 (MQ=255)
                                                                             ttgaacAATGCGGGCTGGTCATGAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  <  2:642305/284‑1 (MQ=255)
                                                                                 acAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACtt                                                                                                                                                                                             <  1:615725/289‑1 (MQ=255)
                                                                                    aTCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCa                                                                                                                                                                                          <  2:136794/289‑1 (MQ=255)
                                                                                     tCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTTCAGTGTGCCGTGGTGCTCACCGCTGGTTACCATCATTCCGACGGGCGCGTTGCCTTTCAGTTCGCGATAACTTTCAt                                                                                                                                                                                         >  1:1744390/1‑289 (MQ=255)
                                                                                     tCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCAt                                                                                                                                                                                         >  1:484048/1‑289 (MQ=255)
                                                                                     tCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCAt                                                                                                                                                                                         >  1:197127/1‑289 (MQ=255)
                                                                                       cGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  >  2:1645581/1‑278 (MQ=255)
                                                                                       cGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCAt                                                                                                                                                                                         >  1:1846633/1‑287 (MQ=255)
                                                                                               tcatcaGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCa                                                                                                                                                                                                                                                   <  2:1547085/221‑1 (MQ=255)
                                                                                               tcatcaGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCa                                                                                                                                                                                                                                                   >  1:1547085/1‑221 (MQ=255)
                                                                                               tcatcaGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCtgtg                                                                                                                                                                                >  1:130034/1‑288 (MQ=255)
                                                                                                 agcaGGAATTCGCGGAATGGCGTAGTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGAAGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTggc                                                                                                                                                                              <  2:1260725/286‑1 (MQ=255)
                                                                                                        aTTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCggcaggc                                                                                                                                                                       >  2:753375/1‑288 (MQ=255)
                                                                                                         ttCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATActgct                                                                                                                                                                                   >  1:342825/1‑275 (MQ=255)
                                                                                                              ggAATGGTGTATTGGTAAAGGGTATCACCGCATGGTACAAGTAACCTGACAAACCGGGCGGCCCCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCtt                                                                                                                                                                 <  2:1863010/287‑1 (MQ=255)
                                                                                                                 agggCGGATTGGTGAAGGTGATCACCGCATGGTGGGAGTAAGCAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGAt                                                                                                                                                             <  2:1774287/287‑1 (MQ=255)
                                                                                                                 aTGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCa                                                                                                                                                                                                                                                   <  1:1646834/203‑1 (MQ=255)
                                                                                                                  tGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATc                                                                                                                                                            <  1:1723130/289‑1 (MQ=255)
                                                                                                                      gTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCAtt                                                                                                                                                        <  1:375593/289‑1 (MQ=255)
                                                                                                                       tATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCt                                                                                                                                                                                                                                                     <  1:119198/195‑1 (MQ=255)
                                                                                                                       tATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCAtt                                                                                                                                                        <  2:57562/288‑1 (MQ=255)
                                                                                                                        aTTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTc                                                                                                                                                      <  1:525175/289‑1 (MQ=255)
                                                                                                                         ttGGTGGAGGTGAGCACGGGATGGTGAGAGTAACAAGACGAACCGGGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTc                                                                                                                                                      <  2:433395/288‑1 (MQ=255)
                                                                                                                               aaGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  <  2:1849480/238‑1 (MQ=255)
                                                                                                                               aaGGTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTc                                                                                                                                                      >  1:1446252/1‑282 (MQ=255)
                                                                                                                                 ggTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTGGATCCAttgacggttaaag                                                                                                                                             >  2:1124599/1‑278 (MQ=255)
                                                                                                                                 ggTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTtata                                                                                                                                              >  1:399000/1‑288 (MQ=255)
                                                                                                                                 ggTGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTG‑CCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCt                                                                                                                                                                                                                                                     <  2:923096/184‑1 (MQ=255)
                                                                                                                                   tGATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAgg                                                                                                                                            <  1:1212611/288‑1 (MQ=255)
                                                                                                                                   ggATCACCGCATGGGGAGAGTAAACAGACGACCCGTGCGGCCCCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAgg                                                                                                                                            <  2:1194157/287‑1 (MQ=255)
                                                                                                                                    gATCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGgc                                                                                                                                          >  2:1479721/1‑289 (MQ=255)
                                                                                                                                      tCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGAt                                                                                                                                                                                                  <  1:1801532/231‑1 (MQ=255)
                                                                                                                                      tCACCGCATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTCACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGgcgc                                                                                                                                        >  1:1139912/1‑289 (MQ=255)
                                                                                                                                            cATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGtt                                                                                                                                                                                                        >  2:235708/1‑219 (MQ=255)
                                                                                                                                            cATGGTGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGAATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATAATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGc                                                                                                                                  >  1:1000055/1‑289 (MQ=255)
                                                                                                                                             aTGGTGAGAGTAAACAGACTAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGc                                                                                                                                  <  1:241913/288‑1 (MQ=255)
                                                                                                                                                 tGAGAGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCTTgg                                                                                                                              >  1:83779/1‑288 (MQ=255)
                                                                                                                                                  gagaGTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGAACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGc                                                                                                                            <  1:1020702/289‑1 (MQ=255)
                                                                                                                                                   agagTAAACAGACAAACCGTGCGGCACCACCAGTTGCCCCCTGGATGTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGc                                                                                                                            <  2:51420/288‑1 (MQ=255)
                                                                                                                                                    gagTAAACAGACGAACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTGCATACTGCTGTGGCGGCAGGCACTCTTCGCACCATTTCAGGGTATAGGTCCCGCAAGCGTGGGcc                                                                                                                           >  2:1167579/1‑288 (MQ=255)
                                                                                                                                                         aacagacgaaCCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTTGCGGCAGGCACTCTTCGATCCCTTTCAGGTTATAGGGCGCGCAGTCCTGGGCCAGTTTg                                                                                                                     >  2:1708611/10‑289 (MQ=255)
                                                                                                                                                          acagacgaaCCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAggtggg                                                                                                                    >  1:1047510/9‑284 (MQ=255)
                                                                                                                                                               cgaaCCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCa                                                                                                               >  1:805497/4‑289 (MQ=255)
                                                                                                                                                               cgaaCCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCCTGGCCCAGTTTGGTCGCa                                                                                                               >  2:1667094/4‑289 (MQ=255)
                                                                                                                                                                gaaCCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCa                                                                                                               <  2:1831383/286‑1 (MQ=255)
                                                                                                                                                                gaaCCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTAAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCAt                                                                                                              <  2:202203/287‑1 (MQ=255)
                                                                                                                                                                   ccGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGt                                                                                                           >  1:1270841/1‑289 (MQ=255)
                                                                                                                                                                    cGTGCGGCACCAGCGGTTTCCCCCTGGATTTGGCGATTGCGCCAATTTCCACCAGCGTGGTTAAACCACCGAACCAGCCAACAGCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGtt                                                                                                          <  2:1283869/289‑1 (MQ=255)
                                                                                                                                                                    cGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGtt                                                                                                          <  2:805497/289‑1 (MQ=255)
                                                                                                                                                                    cGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGtt                                                                                                          <  1:52078/289‑1 (MQ=255)
                                                                                                                                                                    cGTGAGGCACCACCAGTGCCCCCCTGGTTTTTGCGATTGCGGCAATTTCCACCAGCGTGGTTAACCCACCGCACCAGCCAACAGCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCTATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGtt                                                                                                          <  2:1000055/289‑1 (MQ=255)
                                                                                                                                                                     gTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTc                                                                                                         <  2:484048/289‑1 (MQ=255)
                                                                                                                                                                      tGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTc                                                                                                         >  1:1872082/1‑288 (MQ=255)
                                                                                                                                                                      tGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTc                                                                                                         >  1:1419992/1‑288 (MQ=255)
                                                                                                                                                                        cGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCCCGCAAGCTTGGGCCAGTTTGGTCCCATAGTTCAc                                                                                                       >  2:1584567/1‑288 (MQ=255)
                                                                                                                                                                               accaatttgccccTGGAATTGGCGGTTGCGGCCATTTCCCCCAGCCTGGTTAAACCCACGCACCAGCCAACATCCGGGTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGAACATCATTCCGACTGGCCCGTTGCGTTTTAGTTCGCGATAACTTTCATACTGCTGGGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGAc                                                                                               <  2:1152661/280‑1 (MQ=255)
                                                                                                                                                                                ccaGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGAc                                                                                               >  1:1184494/1‑288 (MQ=255)
                                                                                                                                                                                                   ggCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCAtt                                                                           >  1:406958/1‑289 (MQ=255)
                                                                                                                                                                                                    gCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGGATAGTTCACGTCCTGACTCATCCAGTAGGCGAGCATTa                                                                          >  2:787042/1‑289 (MQ=255)
                                                                                                                                                                                                         tGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGtt                                                                                                                       <  2:40297/239‑1 (MQ=255)
                                                                                                                                                                                                                            gTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGGAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCAtttt                                                   <  1:870178/288‑1 (MQ=255)
                                                                                                                                                                                                                            gTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCAtttt                                                   <  2:1250740/288‑1 (MQ=255)
                                                                                                                                                                                                                                    accaccGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCa                                                       <  1:1892363/276‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccAACATCCGGCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATa                              >  1:1789752/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          ggCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCtt                    >  1:329528/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           gCTGCATAATGTCGATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGCCTCATCCAGCAGTCGAGCATTAACCAGAAAACCTCACCCCATTTTTCACGCCAATCCGCCACCATCACCGCATCttt                   >  2:16306/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    tGTCGGTACCGGTTTGTGAAAGCGTACGAAAAGATTGCAGTGTGGCGGGGTGCTGACCGATGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCTTTGCGGATccc          <  2:1898861/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tGTCGATACCTGTTTCTGAAAGCGTACGAAAAGATTTCAGTATGCCGTGGTTCTAGCCGCTGGTGACCATCCTTCCTACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCCTACTGCTGTGGCGGCAGGCACTCTTCGATCCATGTCAGGTTATAGGGCGCGCAGGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCTTTGCGGATccc          <  2:339286/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCTTTGCGGATCCCCGCa      <  1:1708611/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gATACCGGTTTCTGAAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCTTTGCGGATCCCCGCa      <  1:1479721/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                      
AAGCACACTTTTATGAATACGACCATTCACCGGAACCGGCTCATTGAGCAGAATCGGGTCAAACTGCGGACGCATCGTACTACAATCCGGGCTGGTCATCAGGAATTCGCTGAATGGCGTATTGGTGAAGGTGATCACCGCATGGTGAGAGTAAACAGAGCTACCGTGCGGCACCACCAGTTGCCCCCTGGATTTGGCGATTGCGGCAATTTCCACCAGCGTGGTTAAACCACCGCACCAGCCAACATCCGGCTGCATAATGTCGATACCGGTTTCACTAAGCGTACGAAAAGATTGCAGTGTGCCGTGGTGCTCACCGCTGGTGACCATCATTCCGACTGGCGCGTTGCGTTTCAGTTCGCGATAACTTTCATACTGCTGTGGCGGCAGGCACTCTTCGATCCATTTCAGGTTATAGGGCGCGCAAGCGTGGGCCAGTTTGGTCGCATAGTTCACGTCCTGACTCATCCAGCAGTCGAGCATTAACCAGAAATCCTCACCGCATTTTTCACGCATATCCGCGACCATAGCGGCATCTTTGCGGATCCCCGCATCGC  >  CP042583/1931534‑1932090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A