Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 734,281 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583734,2810AT99.0% 461.0 / NA 202intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (105/94);  minor base C (1/1);  total (107/95)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583734,2820GC98.5% 462.1 / ‑5.4 202intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (104/94);  minor base T (2/1);  total (107/95)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583734,2830CG99.5% 474.3 / NA 202intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (107/94);  total (107/95)
Fisher's exact test for biased strand distribution p-value = 4.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 202 total aligned reads displayed.

AACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGAGCATGGTGAGCCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGAGCGGGATCAGCTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGAGCTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTA  >  CP042583/734006‑734553
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                 
    ggTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGct                                                                                                                                                                                                                                                                    <  1:709386/289‑1 (MQ=255)
     gTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCAt                                                                                                                                                                                                                                                                         >  2:297782/1‑283 (MQ=255)
               agcTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGAt                                                                                                                                                                                                                                                            <  1:1345869/286‑1 (MQ=255)
                              aGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATCTTTGGTATGGCCGCGTGCATTATCGCCGCCGTCTGGCGTAACCGTTGACCGGATCGCTTGAGGATGTCCCGTGCGGTGGTGGGGACCTCGATTCCGGCCTTTGCCCTGGGGATGCGTTTAC‑TTCATGTAtt                                                                                                                                                                                                                                         >  2:741658/1‑289 (MQ=255)
                                ccGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATtc                                                                                                                                                                                                                                        >  1:1782475/1‑288 (MQ=255)
                                 cGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTAtt                                                                                                                                                                                                                                         <  1:1009410/286‑1 (MQ=255)
                                     gTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGtt                                                                                                                                                                                                                                  >  1:766387/1‑289 (MQ=255)
                                     gTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGtt                                                                                                                                                                                                                                  >  2:669986/1‑289 (MQ=255)
                                              gTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTgg                                                                                                                                                                                                                           >  1:503379/1‑287 (MQ=255)
                                                tCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTGGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGggc                                                                                                                                                                                                                         <  1:1643347/287‑1 (MQ=255)
                                                tCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCCTGGCGGTGTCGGGGATCTCGTTTCCGGCCTTTGCTCTGGGGATGCTTGTAA‑TTCAGGTATTCTCCGTGTCACTGggc‑tt                                                                                                                                                                                                                      >  2:1786113/1‑288 (MQ=255)
                                                    gCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTgggg                                                                                                                                                                                                                                                              <  2:1251213/247‑1 (MQ=255)
                                                                 aaTTCTGTGGAGGGGG‑GTTTGGCCTGTGGATGGGGTCGCGTGGTCCGGTTGCCGATGGGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGc                                                                                                                                                                                                    <  2:1033970/289‑1 (MQ=255)
                                                                  aTGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGc                                                                                                                                                                                                    >  1:1379533/1‑289 (MQ=255)
                                                                    gCTGTGCAGGGGGCTTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGATCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAg                                                                                                                                                                                                  >  1:835492/1‑289 (MQ=255)
                                                                    gCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTTCCTa                                                                                                                                                                                                              >  1:1340836/1‑277 (MQ=255)
                                                                      tgtgCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCAt                                                                                                                                                                                                                                                                         <  2:416612/218‑1 (MQ=255)
                                                                        tgCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACa                                                                                                                                                                                               <  2:1209329/288‑1 (MQ=255)
                                                                        tgCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAg                                                                                                                                                                                              >  1:667557/1‑289 (MQ=255)
                                                                           aGGGGGATTTTGGCCTGTCGATTGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGtt                                                                                                                                                                                            <  2:805498/288‑1 (MQ=255)
                                                                             ggggATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTgg                                                                                                                                                                                          <  1:669986/288‑1 (MQ=255)
                                                                               ggATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCCTTTGCTCTGGGGATGCTTTTAA‑TTCAGTTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGAcgggtgtag                                                                                                                                                                                        >  2:702058/1‑280 (MQ=255)
                                                                                  ttttGGCCTGTCGATGGTGTCGCGTCGTCCGTTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGgcagca                                                                                                                                                                                     <  1:150349/288‑1 (MQ=255)
                                                                                  ttttGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCCGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCAc                                                                                                                                                                                    <  2:1948013/289‑1 (MQ=255)
                                                                                  ttttGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGgcagca                                                                                                                                                                                     <  2:1379533/288‑1 (MQ=255)
                                                                                            tcgatggtgtcgcgtcgtCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGCTTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTTAACTGGGC‑TGGCTGCCTTCCTTTGGAGCCGACAGTTCGCAGCACTACATTTTa                                                                                                                                                                           >  2:1155620/13‑288 (MQ=255)
                                                                                             cgatggtgtcgcgtcgtCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTAcc                                                                                                                                                                         <  2:285474/278‑1 (MQ=255)
                                                                                                 ggtgtcgcgtcgtCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCa                                                                                                                                                                                                   >  2:609771/8‑259 (MQ=255)
                                                                                                 ggtgtcgcgtcgtCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCa                                                                                                                                                                                                   <  1:609771/252‑1 (MQ=255)
                                                                                                      cgcgtcgtCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAA‑TGGGCTTGCCTGCCACCCGGGGGGGCGGAC‑GGTGGCGGCACCCCATTTTTCCCTTCCCTgc                                                                                                                                                                >  2:339665/3‑287 (MQ=255)
                                                                                                             tcCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGgc                                                                                                                                                        >  1:1115045/1‑289 (MQ=255)
                                                                                                                 gTTGCCGATGGTAGTGCCGGCCGCTTTATGCCAACGCTGGTGCTGACCATAACCAGTATGGTCTGGGCGGTTATATGTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGcgcg                                                                                                                                                     <  2:1740887/288‑1 (MQ=255)
                                                                                                                   tGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCa                                                                                                                                                  <  2:346054/289‑1 (MQ=255)
                                                                                                                      cGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGt                                                                                                                                                <  1:855051/288‑1 (MQ=255)
                                                                                                                       gATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTg                                                                                                                                               >  1:1740887/1‑288 (MQ=255)
                                                                                                                               tGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCCCGGAGCGGCAGTGGccgccggg                                                                                                                                      >  1:1934066/1‑287 (MQ=255)
                                                                                                                                       gCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGgcgc                                                                                                                               >  2:540639/1‑288 (MQ=255)
                                                                                                                                                   cGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCcgcgc                                                                                                                  <  1:694847/289‑1 (MQ=255)
                                                                                                                                                              aCCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCCCGGCCGGGCAGTGGCCGCCGTGATGGGCCGCTTTACCCGCGCGTCTTTTGTc                                                                                                        >  2:120402/1‑288 (MQ=255)
                                                                                                                                                                         tATGGTCTGGGCGGTTATATTTGGTATGGGGGCGGGAATTCTCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAg                                                                                             <  1:970310/288‑1 (MQ=255)
                                                                                                                                                                         tATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATgg                                                                                                                                  <  2:1570169/251‑1 (MQ=255)
                                                                                                                                                                          aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCTGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                           <  1:823890/289‑1 (MQ=255)
                                                                                                                                                                          aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                           <  1:540639/289‑1 (MQ=255)
                                                                                                                                                                          aTGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                           <  1:366326/289‑1 (MQ=255)
                                                                                                                                                                              tCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGTCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACt                                                                                                                                                                                   >  1:1951630/1‑198 (MQ=255)
                                                                                                                                                                              tCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAg                                                                                             <  2:693014/283‑1 (MQ=255)
                                                                                                                                                                               cTGGGCGGTTATATTTGGTAGGGCGGCTGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGAt                                                                                      <  1:1901077/289‑1 (MQ=255)
                                                                                                                                                                                 gggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATta                                                                                    >  1:330850/1‑289 (MQ=255)
                                                                                                                                                                                 gggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATta                                                                                    >  1:1321128/1‑289 (MQ=255)
                                                                                                                                                                                  ggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCCTTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATGCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTTGGAGCAGAAAGTTGGCAGCAATACATTTTACCC‑TCCCTGACGCGCGGCCCGGCAGTGGCCGCCGGTATCGCGCTCTTTCCCCGCGCGTCGTTTGTCGAAGTTTTAACCGAAGATtat                                                                                   >  2:1952323/1‑289 (MQ=255)
                                                                                                                                                                                  ggCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTTGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCTCGCGTCGTTTGTCGCTGTTTTAAGAGAAGATtat                                                                                   >  2:162573/1‑289 (MQ=255)
                                                                                                                                                                                   gCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGct                                                                                                                                                                                                                                                                    >  2:1845/1‑114 (MQ=255)
                                                                                                                                                                                   gCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGct                                                                                                                                                                                                                                                                    <  1:1845/114‑1 (MQ=255)
                                                                                                                                                                                   gCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGgcag                                                                                                                                                                                       <  2:906410/189‑1 (MQ=255)
                                                                                                                                                                                   gCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                           <  2:1217448/280‑1 (MQ=255)
                                                                                                                                                                                       ttATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGAt                                                                                                                                                                                                                                                            <  1:1283253/118‑1 (MQ=255)
                                                                                                                                                                                       ttATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTgg                                                                                                                                                                                          >  2:839825/1‑182 (MQ=255)
                                                                                                                                                                                       ttATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGTGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCg                                                                              >  1:1045031/1‑289 (MQ=255)
                                                                                                                                                                                               ggTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGa                                                                      >  1:408302/1‑289 (MQ=255)
                                                                                                                                                                                                 tATGGCGGCGTGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGgcgcg                                                                                                                              <  2:1646444/231‑1 (MQ=255)
                                                                                                                                                                                                 tATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAgg                                                                    >  1:906615/1‑289 (MQ=255)
                                                                                                                                                                                                 tATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAgg                                                                    >  1:622190/1‑289 (MQ=255)
                                                                                                                                                                                                 tATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TAGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAgg                                                                    >  1:22514/1‑289 (MQ=255)
                                                                                                                                                                                                    ggcggcGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCg                                                                                                                                                                                                                                    <  1:1439276/128‑1 (MQ=255)
                                                                                                                                                                                                    ggcggcGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCg                                                                                                                                                                                                                                    >  2:1439276/1‑128 (MQ=255)
                                                                                                                                                                                                    ggcggcGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTATCGCGAGGGCg                                                                 >  1:1394805/1‑289 (MQ=255)
                                                                                                                                                                                                    ggcggcGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCg                                                                 >  2:57768/1‑289 (MQ=255)
                                                                                                                                                                                                      cggcggGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCg                                                                                                                                                                                                                                    <  1:772393/126‑1 (MQ=255)
                                                                                                                                                                                                      cggcggGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCg                                                                                                                                                                                                                                    >  2:772393/1‑126 (MQ=255)
                                                                                                                                                                                                           ggAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAgggg                                                          >  2:1589098/1‑289 (MQ=255)
                                                                                                                                                                                                           gcaaTTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCCTTTAA‑TTCAGGTATTCTCCGTTGAACTGTGC‑TGGCTGCCTACCGTGGGCGCAGACAGTTGGCAGCACTACTTTTTACCC‑TCCCTGACGCCCGGCGCGGCCGTCGCCGCCGTCATGCCGCGCTATCCCCCCGCGTCGTTGGTCGTTGTCTTCAGCTAAGCTGCATCGCGTACCGCCGGGGCGCAAgctg                                                          >  2:209962/3‑286 (MQ=255)
                                                                                                                                                                                                               ttATCGGCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAg                                                      <  1:1811813/289‑1 (MQ=255)
                                                                                                                                                                                                                  tCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATAACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGa                                                   <  2:484427/289‑1 (MQ=255)
                                                                                                                                                                                                                          ggcTGGCGGAACCGTGGGCCGGAGCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCGGGGGATGCTTTTAA‑TTCGGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGGGCAGACAGTGGGCAGCACTACATTTTACCC‑TCCCGGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTggg                                           <  2:1934066/287‑1 (MQ=255)
                                                                                                                                                                                                                            cTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGtt                                         <  1:1589098/289‑1 (MQ=255)
                                                                                                                                                                                                                                 gTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCt                                    <  1:1535354/289‑1 (MQ=255)
                                                                                                                                                                                                                                   aaCCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGCCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAACGGGGTGCGCGAAACCTGGGTTGTCCTCa                                  >  2:461129/1‑289 (MQ=255)
                                                                                                                                                                                                                                      cGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAac                               <  2:1321128/289‑1 (MQ=255)
                                                                                                                                                                                                                                      cGTGGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTAGTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAac                               <  1:1600208/289‑1 (MQ=255)
                                                                                                                                                                                                                                         tGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGc                                                     >  1:297585/1‑264 (MQ=255)
                                                                                                                                                                                                                                            ccGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACggg                          <  1:1210225/288‑1 (MQ=255)
                                                                                                                                                                                                                                               gATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTAc                      >  1:476679/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aTCGATTGAGTATGACCATTGCGGTGTCGGGGCTCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGGTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGAGAGGATTTTCTGGGTACCGAGAGGGGCAAAGGGGTGAGGGAAACCTGGGTTGTCCGCaacacagggccacg                     >  2:674174/1‑277 (MQ=255)
                                                                                                                                                                                                                                                aTCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTTAGCGAAACGTGGGTTTTCCTCAAACACGGGCCACg                     >  2:114535/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 tCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGt                    <  1:1235836/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   gATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTaa                  <  1:199977/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          tATGGCCATTTGGGTGTCGGGGATCCCCTTTTCGGGATTTTGTCCGGGGATTGTTTTAATTTCGGGTA‑TCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat            <  1:339665/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tATGACCATTGCGGTGTGTGTGATCTTGTTTCCTGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTGGCCGTTGAACTGGTC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCTCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat            <  2:1286330/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGtt                                         <  1:684666/259‑1 (MQ=255)
                                                                                                                                                                                                                                                          tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgatg           >  1:213918/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat            <  2:1411281/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat            <  1:490835/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCgat            <  1:1155620/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              aCCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGCATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCCCTACATTTTACCC‑TCCCTGACCCTCGTCGCGGCAGTGGCCGCCCTCATGGCGCGCTTTACCCGCGCGCCGTCTGCCTACGCGTTACGCGGAGATTATATGCGTACCGCGTGGGCGCAAGGGGCGAGCTAAACGTGGGGTGTCCTCATACTACGGCCACGTaaacacgtgatc        >  2:1271805/1‑278 (MQ=255)
                                                                                                                                                                                                                                                               ccATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTCA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATGTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATcc       <  2:766387/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               ccATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATccc      >  1:1875299/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  ttGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                           <  2:313961/201‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ttGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCg                                                                                           >  1:313961/1‑201 (MQ=255)
                                                                                                                                                                                                                                                                   tGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATGCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACCTTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGTGCTACGTAACGCGATGATCCCGGTa  <  1:1672898/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCGCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTa  <  1:1309836/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                 
AACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGAGCATGGTGAGCCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGAGCGGGATCAGCTTTCCGGCATTTGCTCTGGGGATGCTTTTAA‑TTCAGGTATTCTCCGTTGAACTGGGC‑TGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCC‑TCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGAGCTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTA  >  CP042583/734006‑734553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A