Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 662,981 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583662,9810AT99.1% 519.9 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (108/112);  minor base G (2/0);  total (111/112)
Fisher's exact test for biased strand distribution p-value = 2.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583662,9820CG99.6% 524.8 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (110/112);  minor base T (1/0);  total (111/112)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583662,9830TA99.6% 525.9 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (111/111);  total (111/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 223 total aligned reads displayed.

TCCCGCCTCCACCAGTCCTAAACTCGTGCTAAGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGAACTATTTGTGACGTTGTTCATGTTTATGCCAAAGTCACTTTCGTTACACAGCACGCTTTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGCTCAA  >  CP042583/662702‑663261
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
   gtccTCCACCCGTCCTAATGACGTCCAAAGATGACGCACTTCGTAAACACAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTacac                                                                                                                                                                                                                                                                              <  2:968498/287‑1 (MQ=255)
   cGCCCCCACCCGTCCTAAGGACGTCGAAAGCTGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTacac                                                                                                                                                                                                                                                                              <  2:1094810/289‑1 (MQ=255)
                   aatgacgtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGTCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGc                                                                                                                                                                                                                                                              >  2:1557786/12‑289 (MQ=255)
                        cgtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAatta                                                                                                                                                                                                                                                         >  1:417093/7‑289 (MQ=255)
                         gtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTacac                                                                                                                                                                                                                                                                              <  1:1046645/262‑1 (MQ=255)
                         gtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTacac                                                                                                                                                                                                                                                                              >  2:1046645/6‑267 (MQ=255)
                         gtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTaca                                                                                                                                                                                                                                                                               <  1:1013391/261‑1 (MQ=255)
                         gtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCCTGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCCTGGTTATGCCAAAGTCGGATTCGTTACACAGCACCGATTCCCTTCAatttt                                                                                                                                                                                                                                                        >  2:1368758/6‑287 (MQ=255)
                         gtcgaaaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTAAGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAattat                                                                                                                                                                                                                                                        >  2:1692835/6‑289 (MQ=255)
                              aaGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCTAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTg                                                                                                                                                                                                                                                   <  1:111775/289‑1 (MQ=255)
                                aaacgaacgcTTCGTAAAACCAGTCCTGCTTCCAGGGCTTGGCGGCCAGCTTGTGTTCTA‑TCAACAGTCGGTTGCCGCT‑CGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTGTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGcc                                                                                                                                                                                                                                                 <  2:1946031/280‑1 (MQ=255)
                                  tGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGcc                                                                                                                                                                                                                                                 <  2:787778/287‑1 (MQ=255)
                                           tCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGaa                                                                                                                                                                                                                                      >  1:760949/1‑289 (MQ=255)
                                            cGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGaa                                                                                                                                                                                                                                      >  1:916071/1‑288 (MQ=255)
                                               aaaaCCCGTCCGGCTTCAGGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCTGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCg                                                                                                                                                                                                                                  <  1:348532/289‑1 (MQ=255)
                                               aaaaCCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAAAcc                                                                                                                                                                                                                                   >  2:1352753/1‑288 (MQ=255)
                                                 caCCCGTCCATCTTCCAGGGCTTATCGGCCAGCTGTTTTTCTA‑TCAACAGTCGGTTGCCGCG‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCa                                                                                                                                                                                                                                <  2:634201/288‑1 (MQ=255)
                                                 aaCCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCa                                                                                                                                                                                                                                <  1:1175686/289‑1 (MQ=255)
                                                    cgtcccggCTTCAGGGGCTTGTGGCCCAGTTTTTG‑TCTATTAAACAGT‑GGGTGGCGCTGGGAGAGGCGTCGGCAAACCATTTTGAAACCACCAAACCCCTGCCATCTAACAAGCTCCTTTTGGGCC‑ATGGAAGGGCAAGGCGAAAAGGCAAGAACGACGGGCTGGTTAACCAGT‑GGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACttt                                                                                                                                                                                                                            <  2:1065059/282‑1 (MQ=255)
                                                    cAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGAGGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCAACGATTCCATGCAATTATTCGTGCCTTGTTCAAGaactgacgctt                                                                                                                                                                                                                             >  1:1946031/1‑280 (MQ=255)
                                                      gTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCg                                                                                                                                                                                                                                  >  2:979848/1‑282 (MQ=255)
                                                      gTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTCACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTa                                                                                                                                                                                                                           >  1:202306/1‑289 (MQ=255)
                                                       tCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTCCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCa                                                                                                                                                                                                                                                             <  1:1724004/254‑1 (MQ=255)
                                                       tCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTCCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCa                                                                                                                                                                                                                                                             >  2:1724004/1‑254 (MQ=255)
                                                        ccAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACttt                                                                                                                                                                                                                            <  2:417093/286‑1 (MQ=255)
                                                        ccAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTaa                                                                                                                                                                                                                          <  1:1255908/288‑1 (MQ=255)
                                                        ccAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAat                                                                                                                                                                                                                         >  1:1398215/1‑289 (MQ=255)
                                                            cTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTg                                                                                                                                                                                                                     >  1:570655/1‑289 (MQ=255)
                                                             ttCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GTAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATTAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAatat                                                                                                                                                                                                                       <  1:1496133/286‑1 (MQ=255)
                                                             ttCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAatat                                                                                                                                                                                                                       <  1:1010571/286‑1 (MQ=255)
                                                              tCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAatat                                                                                                                                                                                                                       <  2:344562/285‑1 (MQ=255)
                                                                 aGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGATCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGCTGGTCACGCCG‑ACAGGCCAGCACGAACGGCCCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTCACGTTGTTCGTGTTTATGCCAAAGTCAGATTCCTTACACAGCACCGCATCCATGCAATTGTTCGGGACTTTTTCCAGAACTCGCACTTTACTTTTGGGaga                                                                                                                                                                                                                >  2:838831/1‑287 (MQ=255)
                                                                      ttGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTacac                                                                                                                                                                                                                                                                              >  2:1298877/1‑222 (MQ=255)
                                                                        gTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGcc                                                                                                                                                                                                                                                 >  1:688511/1‑249 (MQ=255)
                                                                        gTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGcc                                                                                                                                                                                                                                                 <  2:688511/249‑1 (MQ=255)
                                                                              cAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAAt                                                                                                                                                                                                   >  1:1142273/1‑289 (MQ=255)
                                                                                         cTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGc                                                                                                                                                                                        <  2:1398215/289‑1 (MQ=255)
                                                                                             tCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTaa                                                                                                                                                                                                                          >  1:1784400/1‑252 (MQ=255)
                                                                                             tCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAg                                                                                                                                                                                     <  1:208553/289‑1 (MQ=255)
                                                                                                  aGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCGGATTCGTTACACAGCACCGATTCCATGCAATTTTTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGAggcc                                                                                                                                                                                >  2:1545773/1‑287 (MQ=255)
                                                                                                    tCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTaaa                                                                                                                                                                              >  1:303888/1‑289 (MQ=255)
                                                                                                    tCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTaaa                                                                                                                                                                              >  1:1803327/1‑289 (MQ=255)
                                                                                                     cGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTaaa                                                                                                                                                                              <  1:1409528/288‑1 (MQ=255)
                                                                                                       gTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTACAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTaaaaaa                                                                                                                                                                           >  2:227588/1‑289 (MQ=255)
                                                                                                                 gggggagCGTAAGTCCATCATTTTGTAACCCACTAACACCTGCCATTCTACAAGCTGCTGTTTGGCCTATAGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGAGTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACt                                                                                                                                                                  <  2:1934341/286‑1 (MQ=255)
                                                                                                                   aggagCGTAAGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTg                                                                                                                                                                 <  1:1692835/288‑1 (MQ=255)
                                                                                                                      agCGTACGCCAATCATTTTGTAACCCCCTAACTCCTTCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCgg                                                                                                                                                              <  1:1368758/288‑1 (MQ=255)
                                                                                                                       gCGTCCGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTGTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGt                                                                                                                                                             <  2:186624/288‑1 (MQ=255)
                                                                                                                       gCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGt                                                                                                                                                             <  1:1071915/288‑1 (MQ=255)
                                                                                                                         gTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATAc                                                                                                                                                                   <  1:406983/280‑1 (MQ=255)
                                                                                                                         gTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATAc                                                                                                                                                                   >  2:406983/1‑280 (MQ=255)
                                                                                                                          tACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGa                                                                                                                                                         >  2:1012310/1‑289 (MQ=255)
                                                                                                                                  tCATTTTGTAACCCACTAACTCCTGCTATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATacac                                                                                                                                                   >  2:1633190/1‑287 (MQ=255)
                                                                                                                                  tCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATacac                                                                                                                                                   >  1:970853/1‑287 (MQ=255)
                                                                                                                                     ttttGTAACCCACTCCCCCCTGCCATTCTACAAGCTGCTTTTGAGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGGTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTaa                                                                                                                                              <  2:1164473/289‑1 (MQ=255)
                                                                                                                                     tgttGTAACCCACTAACTCC‑GCCATTCTACAATCTGCTTTTTAGCCAATGGATGTTCACGCCG‑ACAGGCCAGCACGAACAGCTCGTTGACCAGTGAGGTAAAATCAATGGATGAATTTGTTACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAAc                                                                                                                                             <  1:1461743/287‑1 (MQ=255)
                                                                                                                                          tAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCa                                                                                                                                         <  1:45910/289‑1 (MQ=255)
                                                                                                                                             cccACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCa                                                                                                                                      <  2:1142273/289‑1 (MQ=255)
                                                                                                                                                 cTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATAcc                                                                                                                                  <  1:1087234/289‑1 (MQ=255)
                                                                                                                                                  tAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGt                                                                                                                                           <  1:116465/279‑1 (MQ=255)
                                                                                                                                                        cTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACgatga                                                                                                                           >  1:520733/1‑289 (MQ=255)
                                                                                                                                                         tGCCTTTCTCCAAGCGTCTTTTTTGCCAATGGATGGTCACGCCG‑AACGGCCAGCACCAACGGCTCTTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGGCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAGATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACgatgat                                                                                                                          <  2:1803327/289‑1 (MQ=255)
                                                                                                                                                         tGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACgatgat                                                                                                                          >  2:673028/1‑289 (MQ=255)
                                                                                                                                                          gtcATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATa                                                                                                                         <  1:1557786/287‑1 (MQ=255)
                                                                                                                                                          gCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGcc                                                                                                                                                                                                                                                 <  1:129301/169‑1 (MQ=255)
                                                                                                                                                          gCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATa                                                                                                                         >  1:1955906/1‑289 (MQ=255)
                                                                                                                                                              ttCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCAc                                                                                                                                        >  1:987389/1‑270 (MQ=255)
                                                                                                                                                                   cAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACga                                                                                                                              <  1:1222236/275‑1 (MQ=255)
                                                                                                                                                                        tgctTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACTGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCAc                                                                                                           <  1:184937/289‑1 (MQ=255)
                                                                                                                                                                        tgctTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCAc                                                                                                           <  2:464360/289‑1 (MQ=255)
                                                                                                                                                                         gctTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTCCCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTACCGTCACCATACCACGTTGTTAAGCATTCATATCaag                                                                                                          >  2:1246872/1‑287 (MQ=255)
                                                                                                                                                                         gctTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTc                                                                                                                  <  2:1481144/281‑1 (MQ=255)
                                                                                                                                                                               tGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATAtt                                                                                                    <  2:303888/289‑1 (MQ=255)
                                                                                                                                                                                           ggTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTc                                                                                        >  1:725519/1‑289 (MQ=255)
                                                                                                                                                                                                cGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTaa                                                                                                                                                                                                                          <  1:1921058/154‑1 (MQ=255)
                                                                                                                                                                                                cGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTaa                                                                                                                                                                                                                          >  2:1921058/1‑154 (MQ=255)
                                                                                                                                                                                                cGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCg                                                                                                                                                           <  1:1895906/217‑1 (MQ=255)
                                                                                                                                                                                                cGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATAcc                                                                                                                                  >  2:596097/1‑242 (MQ=255)
                                                                                                                                                                                                   cG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAAt                                                                                 <  2:1955906/288‑1 (MQ=255)
                                                                                                                                                                                                        aGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTCAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTTGGAATACACGCTAACGTCCCCATACCCCGAAGATAAGCATTCATATCACGAATATTAAAAAACGTTTAATCGAATTTAtt                                                                            >  2:1741705/1‑289 (MQ=255)
                                                                                                                                                                                                                    aCGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGcc                                                                                                                                                                                                                                                 <  2:497506/112‑1 (MQ=255)
                                                                                                                                                                                                                    aCGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTaa                                                                                                                                              >  2:1181608/1‑211 (MQ=255)
                                                                                                                                                                                                                    aCGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTccc                                                                 >  2:445469/1‑288 (MQ=255)
                                                                                                                                                                                                                    aCGGCTCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTccc                                                                 >  1:588662/1‑288 (MQ=255)
                                                                                                                                                                                                                     cGGCTCGTTGACCAGTGGGGTAAAATCAACGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCcgc                                                               <  1:467033/289‑1 (MQ=255)
                                                                                                                                                                                                                         tCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGt                                                                                                                                                             >  1:644552/1‑191 (MQ=255)
                                                                                                                                                                                                                         tCGTTGACCAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGcc                                                            >  2:1451289/1‑288 (MQ=255)
                                                                                                                                                                                                                                ccAGTGGGGTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCCCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCCCCATACCACGATGATAAGCATCCATATCACGAATATAAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGa                                                     >  1:1581282/1‑288 (MQ=255)
                                                                                                                                                                                                                                    tGGGGT‑AAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCATAGTGTGATGCGTTAGACAGCACCGATTCCATGCAATTATTAGTGACTCGTTCCAGTATCCGCACTTTAATATTAGGATACATCGCATTAAATTTAACGATTGCCAGCCGAAAAAAATAAAATACTTCTTTAGTAATACCCGCTAACGTCACCATACCACGATGATAAGCATTCACATCACTAATTTTAAAAAGCGTTACATCGCATATCTTTATTAATTCCTGCGCTTCGGTGAGCAAc                                                >  2:1573224/1‑288 (MQ=255)
                                                                                                                                                                                                                                      gggTAAAATCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCa                                                                                                                                 <  2:186204/206‑1 (MQ=255)
                                                                                                                                                                                                                                              tCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGttt                                                                                         >  1:1324854/1‑238 (MQ=255)
                                                                                                                                                                                                                                              tCAATGGATGAATTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCt                                       >  1:614042/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      tgaaTTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGtt                              >  1:1200438/4‑289 (MQ=255)
                                                                                                                                                                                                                                                      tgaaTTTGTGACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGt                               <  2:1964939/285‑1 (MQ=255)
                                                                                                                                                                                                                                                               gACGTTGTTCATGTTTATGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTacc                      <  1:838831/288‑3 (MQ=255)
                                                                                                                                                                                                                                                                              tATGCCAAAGTCTGTTTCGTTAAACAGCAACGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGAACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGc      <  2:1081828/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGCTc    >  2:1760403/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGCTc    >  2:1656052/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGCTc    >  1:498777/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tGCCAAAGTCTGATTCGTTACACAGCACCGATTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGCTc    >  1:1380342/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
TCCCGCCTCCACCAGTCCTAAACTCGTGCTAAGATGACGCACTTCGTAAAACCAGTCCAGCTTCCAGGGCTTGTCGGCCAGCTGTTGTTCTA‑TCAACAGTCGGTTGCCGCT‑GGAGGAGCGTACGCCAATCATTTTGTAACCCACTAACTCCTGCCATTCTACAAGCTGCTTTTTGGCCAATGGATGGTCACGCCG‑ACAGGCCAGCACGAACGGCTCGTTGACCAGTGGGGTAAAATCAATGGAACTATTTGTGACGTTGTTCATGTTTATGCCAAAGTCACTTTCGTTACACAGCACGCTTTCCATGCAATTATTCGTGCCTTGTTCCAGAATCCGCACTTTAATATTGGGATACAGCTCATTAAATTTACCGATTGCCAGCGGTAAAAAATAAAATACTGCGGTCGGAATACACGCTAACGTCACCATACCACGATGATAAGCATTCATATCACGAATATTAAAAAGCGTTTCATCGAATTTCTTTATTAATTCCCGCGCCTCCGGGAGCAACCTTTTTCCTGCTTTTGTTAACGTAACCTTGCGAGTTGTACGCTCAA  >  CP042583/662702‑663261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A