Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 793,410 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583793,4100GC99.5% 475.0 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (98/108);  total (100/108)
Fisher's exact test for biased strand distribution p-value = 4.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
*CP042583793,4110CG99.0% 470.5 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (97/107);  minor base A (1/1);  total (100/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583793,4120TA98.6% 483.4 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (99/106);  minor base C (1/2);  total (100/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 208 total aligned reads displayed.

TCCATTGTCCGTTGGCGGAAATCTTCGCTAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACGCTCACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAGTAACGTAAAGGGAAGCAGCAGGGCTTCACGGG  >  CP042583/793135‑793684
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                
tCCATTGTCCGTTGGCGGAAATCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAgc                                                                                                                                                                                                                                                                        >  1:1699077/1‑288 (MQ=255)
           ttGGCGGAAATCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGACGATTGCCACCACAATCAGAAACGGCCACG‑ACACTGACAGCGCAATTGGCgg                                                                                                                                                                                                                                                             >  1:46648/1‑288 (MQ=255)
           ttGGCGGAAATCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGc                                                                                                                                                                                                                                                            >  1:1231079/1‑289 (MQ=255)
           ttGGCGGAAATCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCACACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAATGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAACCAGCCACGG‑CACCGACACTGGCAGCGCCATTTGCGGc                                                                                                                                                                                                                                                            >  2:1470285/1‑289 (MQ=255)
                ggAAATCTTCCTAAGTTGAACTAATTCTTTCAAATTCAGCCTCACCACGCCCAAAAATAAGCAATGGATACATGCCGCTCAGGCGATCGAGGAAATGCCCACGTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCGCCTTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGAGCCGCAGCCCAGTTAGCG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGAt                                                                                                                                                                                                                                                        <  2:1211120/288‑1 (MQ=255)
                ggAAATCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGAt                                                                                                                                                                                                                                                        <  1:263608/288‑1 (MQ=255)
                ggAAATCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATa                                                                                                                                                                                                                                                       <  2:834979/289‑1 (MQ=255)
                   aaTCTTCCGAAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCg                                                                                                                                                                                                                                                    <  1:710039/289‑1 (MQ=255)
                     tcttccgaaGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTg                                                                                                                                                                                                                                                  <  1:1602767/281‑1 (MQ=255)
                             aGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTa                                                                                                                                                                                                                                           <  1:1305973/288‑1 (MQ=255)
                                  aaCGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTa                                                                                                                                                                                                                                           >  1:1082694/1‑283 (MQ=255)
                                            ttCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAGCCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTa                                                                                                                                                                                                                                           >  2:930208/1‑273 (MQ=255)
                                                  ttCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGc                                                                                                                                                                                                                     <  1:1150731/289‑1 (MQ=255)
                                                  atCAGCGTCACCAAGCCCAAAAATACGAAATGTTGCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGc                                                                                                                                                                                                                     <  2:1350287/288‑1 (MQ=255)
                                                    cAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCa                                                                                                                                                                                                                                                >  1:509576/1‑260 (MQ=255)
                                                     aGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCACCGG‑CACCGACACTGCCAGCGCCATTTGCGCCCGATAGCGTGCCTAGTAATCATGCAAATCTTCAAtttccccg                                                                                                                                                                                                                  >  2:1431954/1‑284 (MQ=255)
                                                       cTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAg                                                                                                                                                                                                                                             >  2:1497719/1‑260 (MQ=255)
                                                                    aaaaaTACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGcc                                                                                                                                                                                                   <  1:1599992/289‑1 (MQ=255)
                                                                                   ttCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGt                                                                                                                                                                                    <  1:1833065/289‑1 (MQ=255)
                                                                                           cgcgCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTg                                                                                                                                                                            <  1:85075/289‑1 (MQ=255)
                                                                                            gcgcAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGc                                                                                                                                                                                                                                                     <  1:175736/215‑1 (MQ=255)
                                                                                            gcgcAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGc                                                                                                                                                                                                                                                     >  2:175736/1‑215 (MQ=255)
                                                                                            gcgcAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGa                                                                                                                                                                           >  1:936713/1‑289 (MQ=255)
                                                                                                aGGCGGTCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGGGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGTGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATc                                                                                                                                                                        <  1:923189/288‑1 (MQ=255)
                                                                                                    gaaagcggAAATGCCCACTTAAGCTGGCAAGACCGAGAAAGTTACGTCGATTAGCATCGGCAGCCCCCATTCCAACCCGAGCCATAAACAACGGAATTAACGGTGAAGTGCCCAGCAGCATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCCCCACAATCAGCAACGG‑CACCGAGACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCGCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCcgcg                                                                                                                                                                    <  2:1132553/282‑1 (MQ=255)
                                                                                                              aTGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCt                                                                                                                                                         >  2:171439/1‑289 (MQ=255)
                                                                                                                gCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCttg                                                                                                                                                       >  2:1668373/1‑289 (MQ=255)
                                                                                                                       tAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGaa                                                                                                                                                                          >  1:151105/1‑263 (MQ=255)
                                                                                                                       aaaGCCAGCGAGAGCTGGGAAGCTGCGTCGGTTAGCCACGCCCGGCCCCATTCCAACCAGCGCCATAGACAGCGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAA‑GGGAAGATTGCCACCACAATCAGAAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGGTAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGa                                                                                                                                                <  2:1147801/288‑1 (MQ=255)
                                                                                                                               cAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTAc                                                                                                                                                                                                             <  1:1561714/220‑1 (MQ=255)
                                                                                                                                          aaGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGAcg                                                                                                                               <  1:588686/287‑1 (MQ=255)
                                                                                                                                          aaGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGAcg                                                                                                                               <  1:1848046/287‑1 (MQ=255)
                                                                                                                                                   cGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCaa                                                                                                                    <  1:156923/289‑1 (MQ=255)
                                                                                                                                                      ttAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAg                                                                                                                  <  1:1668373/288‑1 (MQ=255)
                                                                                                                                                        aGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCgg                                                                                                               <  1:110564/289‑1 (MQ=255)
                                                                                                                                                            tCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGatat                                                                                                           <  1:241326/289‑1 (MQ=255)
                                                                                                                                                             cGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGatat                                                                                                           >  2:1095870/1‑288 (MQ=255)
                                                                                                                                                               gCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCa                                                                                                                                                                                                                                                >  2:1564144/1‑153 (MQ=255)
                                                                                                                                                               gCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTTCAGACGGTCGCGAACCTGACGGCGGATCGCAACGCGGacat                                                                                                           >  2:846412/1‑286 (MQ=255)
                                                                                                                                                               gCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGatat                                                                                                           >  1:681990/1‑286 (MQ=255)
                                                                                                                                                                  gCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCACAGCTACCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGcc                                                                                                     <  1:1474696/289‑1 (MQ=255)
                                                                                                                                                                   cccccGTTCCACCCAGCGCAATACAAAACGGACTTAACGGTGCAGTGCCCAGCAGAATGAGGTCCGGAGCCCAGTTAGAA‑GGGAAGATGGCCACCACGATGAGCAACGG‑CACCGACACTGCCAGCGCGATTTGCGGCAGATAGCGTGCGTAGTAATCATGCATATCGTCCATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCAGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACTGTCGAGAACCTGACGGCGGATGGCAAAGCGGTTATTCTGccc                                                                                                    <  2:660822/289‑1 (MQ=255)
                                                                                                                                                                   cccccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCg                                                                                                                                                                                                        >  1:1643732/1‑189 (MQ=255)
                                                                                                                                                                     cccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGc                                                                                                                                                                                                                                                            <  1:1413262/135‑1 (MQ=255)
                                                                                                                                                                     cccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGc                                                                                                                                                                                                                                                            >  2:1413262/1‑135 (MQ=255)
                                                                                                                                                                     cccATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCgg                                                                                                  <  1:366603/289‑1 (MQ=255)
                                                                                                                                                                        aTTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTg                                                                                                                                                                                                                                                  <  2:786356/142‑1 (MQ=255)
                                                                                                                                                                        aTTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTg                                                                                                                                                                                                                                                  >  1:786356/1‑142 (MQ=255)
                                                                                                                                                                        aTTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGt                                                                                               <  1:969185/289‑1 (MQ=255)
                                                                                                                                                                            cAACCCGGGCCATAAACAGCGGAATTAACGATGCAGTGCCCAGCAGAATGAGCGCCGCAGCGCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGA‑CACCGACACTGCCAGCGCCATGTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTGGAGTAGCAGCGGCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATa                                                                                           <  2:284079/289‑1 (MQ=255)
                                                                                                                                                                              aCCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGccc                                                                                                    <  2:403423/278‑1 (MQ=255)
                                                                                                                                                                              aCCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGccc                                                                                                    >  1:403423/1‑278 (MQ=255)
                                                                                                                                                                                  gcgcCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGAGTGCAAAGCGGATATGCTGCCCGGCGGGATAaccaa                                                                                      >  2:1122678/1‑286 (MQ=255)
                                                                                                                                                                                   cgcCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAAATTGCCACCACAATCAGCAACAG‑CACCGACACTGCCAGCGCCATTTTCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCGGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGAGTGCAACGCGGATATGCTTCCCGGCTCGCTAccccac                                                                                     >  2:1980611/1‑288 (MQ=255)
                                                                                                                                                                                     ccATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCg                                                                                  <  1:171439/289‑1 (MQ=255)
                                                                                                                                                                                        tAAACAACGGAATTAGCGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGAGTGATAACCCACCCGtt                                                                                >  2:74222/1‑288 (MQ=255)
                                                                                                                                                                                              acggacatgaCGGTGCAGGGGCCAGCAGAATGAGGGCCGCAGCCAAGTTAGAG‑GGGAAGATTGACACCAGAATCAGAAACGG‑CACCGACAGTGCCAGCGCCATTTGCGGCGGATGGCGTGCATAGTGATCATGCATATCGTCAAGTGGCTCGAGTACCAGCGTCGCCCAGCGGCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGGGATAACCCACCCGTTCGCGTaa                                                                         <  2:1848642/280‑1 (MQ=255)
                                                                                                                                                                                               cGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGcc                                                                                                                                                              >  2:1601456/1‑203 (MQ=255)
                                                                                                                                                                                               cGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTaa                                                                         >  1:275467/1‑288 (MQ=255)
                                                                                                                                                                                                ggAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCgag                                                                                                                                        >  1:877835/1‑224 (MQ=255)
                                                                                                                                                                                                ggAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCgag                                                                                                                                        <  2:877835/224‑1 (MQ=255)
                                                                                                                                                                                                       aCGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACg                                                                                                                                                                    <  1:800527/189‑1 (MQ=255)
                                                                                                                                                                                                              aGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GAGAAGATTGCAACCACAATCAGCAACGG‑CACCGACACTTCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATgcg                                                         <  2:1229864/289‑1 (MQ=255)
                                                                                                                                                                                                                tGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCATACCACCCATgcgc                                                        >  2:1714986/1‑288 (MQ=255)
                                                                                                                                                                                                                tGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATgcgc                                                        >  2:619880/1‑288 (MQ=255)
                                                                                                                                                                                                                 gCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATgcgcg                                                       <  1:619880/288‑1 (MQ=255)
                                                                                                                                                                                                                 gCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATgcgcg                                                       <  1:1516334/288‑1 (MQ=255)
                                                                                                                                                                                                                   ccAGCAGAATGAGCGCCGCCGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CAACGACACTGCCAGCGCCATTGGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAAGTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAAGCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCa                                                     <  2:125283/288‑1 (MQ=255)
                                                                                                                                                                                                                     agcagAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCg                                                                                                                                                                                                                                                    <  2:203022/95‑1 (MQ=255)
                                                                                                                                                                                                                     agcagAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCg                                                                                                                                                                                                                                                    >  1:203022/1‑95 (MQ=255)
                                                                                                                                                                                                                     agcagAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGat                                                                                                             >  1:552707/1‑230 (MQ=255)
                                                                                                                                                                                                                     agcagAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCCGACCCCCCATGCCCGCAGt                                                   >  2:1551474/1‑288 (MQ=255)
                                                                                                                                                                                                                        ggAATGAGCGCCGCAGCCCAGTTGAGG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACa                                                <  2:827032/287‑1 (MQ=255)
                                                                                                                                                                                                                        ggAACGAGCGCCGCAGCCCAGTTGAAG‑GGGAAGATGGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACaa                                               <  2:18195/288‑1 (MQ=255)
                                                                                                                                                                                                                        agAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACa                                                <  2:385694/288‑1 (MQ=255)
                                                                                                                                                                                                                        agAATGAGCGCCGAAGCCCAGTTAGGG‑GGGGAGAGTGCCACCACAATCAGCAACGG‑CACCGCCACTGCAAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACa                                                <  2:1654900/288‑1 (MQ=255)
                                                                                                                                                                                                                          aaTGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGCCGGTCGAGAACCTGACGGCGGATGGCAAAGCGGAGATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAAACCGACCCCCCCTTCGCGCAGtcaa                                                >  2:475819/1‑283 (MQ=255)
                                                                                                                                                                                                                          aaTGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAAc                                                                        >  2:568768/1‑262 (MQ=255)
                                                                                                                                                                                                                          aaTGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAg                                             >  2:1807934/1‑289 (MQ=255)
                                                                                                                                                                                                                          aaTGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAg                                             >  1:1813985/1‑289 (MQ=255)
                                                                                                                                                                                                                           aTGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAgg                                            <  1:826691/289‑1 (MQ=255)
                                                                                                                                                                                                                            tGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAgg                                            >  1:1393781/1‑288 (MQ=255)
                                                                                                                                                                                                                              ggcgaggccggccAGTGAGAG‑GGGAGAATGGCGACCACAAGCAACAACCG‑AACCGACACTGCAAGGGCCATTTGCGACAGATAGGGGGCATAGTACTCATGCAAAGCGTCAATTTGCTCGAGTACACGCGGCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGt                                           <  2:1536262/276‑1 (MQ=255)
                                                                                                                                                                                                                              aGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTc                                          <  1:420441/288‑1 (MQ=255)
                                                                                                                                                                                                                               gcgcCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATgcgcg                                                       >  1:838504/1‑274 (MQ=255)
                                                                                                                                                                                                                                 gccgcAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGt                                           >  1:1315181/1‑284 (MQ=255)
                                                                                                                                                                                                                                 gccgcAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGt                                           <  2:1315181/284‑1 (MQ=255)
                                                                                                                                                                                                                                 gccgcAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACACATgcgcg                                                       <  2:933609/272‑1 (MQ=255)
                                                                                                                                                                                                                                 gccgcAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACACATgcgcg                                                       >  1:933609/1‑272 (MQ=255)
                                                                                                                                                                                                                                      cacccAGTGAGAGAGGGAACA‑TGCCACAACAATCAGACACGG‑CCCCAACGCGGCCACCACCAGTTGCAGCAGATTGCGGGCATAGTAATCATGCATATCGTCCAGTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGGCGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCGCCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAg                                  <  2:424064/286‑1 (MQ=255)
                                                                                                                                                                                                                                      aGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAg                                  <  2:236837/288‑1 (MQ=255)
                                                                                                                                                                                                                                        cccAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATgcgcg                                                       <  2:632285/265‑1 (MQ=255)
                                                                                                                                                                                                                                                 ag‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTc                                          >  2:511439/1‑269 (MQ=255)
                                                                                                                                                                                                                                                  g‑gggAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAGTAACGTAAAggg                      <  1:1431954/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  g‑gggAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAGTAACGTAAAGGGa                     >  1:1060392/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  g‑gggAAGATTGCCA‑CACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGccc                                                                                                    >  2:1069018/1‑209 (MQ=255)
                                                                                                                                                                                                                                                      gAAGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCAt                                                            >  1:1801081/1‑247 (MQ=255)
                                                                                                                                                                                                                                                       aaGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCg                                                                                                                                                                                                        <  2:168657/106‑1 (MQ=255)
                                                                                                                                                                                                                                                        aGATTGCCACCACAATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCATGTTTACCCTGAATCCACGCTGGCCCTGCttg                                                                                                                                                       <  2:1515600/154‑1 (MQ=255)
                                                                                                                                                                                                                                                                    caATCAGCAACGG‑CACCGACACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAGTAACGTAAAGGGAAGCAGCAGGGCTTCACg    >  2:1986392/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                
TCCATTGTCCGTTGGCGGAAATCTTCGCTAGCAGAACGAATACTTTCAATTTCAGCTTCACCACGACCAAAAATACGCAATGTTTCCATGCCGCGCAGGCGATCGAGGAAATGCCCACTTAAGCGAGCAAGAGCGAGAAAGTTACGTCGGTTAGCATCGGCAGCCCCCATTCCAACCAGCGCCATAAACAACGGAATTAACGGTGCAGTGCCCAGCAGAATGAGCGCCGCAGCCCAGTTAGAG‑GGGAAGATTGCCACCACAATCAGCAACGG‑CACGCTCACTGCCAGCGCCATTTGCGGCAGATAGCGTGCATAGTAATCATGCATATCGTCAATTTGCTCGAGTACCAGCGTCGCCCAGCTCCCCGCAGGTTTACCCTGAATCCACGCTGGCCCTGCTTGTTGCAGACGGTCGAGAACCTGACGGCGGATGGCAAAGCGGATATGCTGCCCGGCGTGATAACCCACCCGTTCGCGTAACCAGACCACCCATGCGCGCAGTACAAAGGTCAGAACCAGTAACGTAAAGGGAAGCAGCAGGGCTTCACGGG  >  CP042583/793135‑793684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A