Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,924,695 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,924,6950AT100.0% 518.9 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (101/118);  total (101/118)
*CP0425831,924,6960GC99.5% 509.9 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (101/117);  total (101/118)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,924,6970CG99.5% 510.1 / ‑5.9 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (101/117);  minor base A (0/1);  total (101/118)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 219 total aligned reads displayed.

CGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGAAGCCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTAGCCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCAAACTGATGAC  >  CP042583/1924415‑1924975
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
   tCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGt                                                                                                                                                                                                                                                                                >  2:892549/1‑289 (MQ=255)
     aTGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTac                                                                                                                                                                                                                                                                              <  1:736873/289‑1 (MQ=255)
     aTGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTac                                                                                                                                                                                                                                                                              <  1:654711/289‑1 (MQ=255)
     aTGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTac                                                                                                                                                                                                                                                                              <  1:148316/289‑1 (MQ=255)
     aTGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTac                                                                                                                                                                                                                                                                              <  1:162967/289‑1 (MQ=255)
      tGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTacc                                                                                                                                                                                                                                                                             <  1:104315/289‑1 (MQ=255)
      tGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTacc                                                                                                                                                                                                                                                                             <  1:1404314/289‑1 (MQ=255)
      tGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTacc                                                                                                                                                                                                                                                                             <  1:240748/289‑1 (MQ=255)
      cgcgtgccggaggCTTATTCGCGAAGGCGCCACTGGGTGCGGTGTGCGTGTGCGTAAACAGCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCCTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCAGGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTac                                                                                                                                                                                                                                                                              <  2:1156733/277‑1 (MQ=255)
         aGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTaccacc                                                                                                                                                                                                                                                                          <  1:282418/289‑1 (MQ=255)
                 ggCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTTCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTAc                                                                                                                                                                                                                                                                   <  2:823999/288‑1 (MQ=255)
                   cTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCCCTTTACGTa                                                                                                                                                                                                                                                                >  2:815973/1‑289 (MQ=255)
                      aTTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAAACACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTa                                                                                                                                                                                                                                                                <  2:850462/288‑1 (MQ=255)
                                   cgACGGTGTGCGGTGTTCGTTTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACgaga                                                                                                                                                                                                                                                 <  2:876245/288‑1 (MQ=255)
                                                  ttCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCTATACCATTTCGCTGATTGGTACCACCTCTTTCCGTATTGCTTACAAAGAGATTGACGATAATGGAGt                                                                                                                                                                                                                                 >  2:274898/1‑289 (MQ=255)
                                                  ttCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGt                                                                                                                                                                                                                                 >  1:1792790/1‑289 (MQ=255)
                                                   tCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGt                                                                                                                                                                                                                                 <  1:1413959/288‑1 (MQ=255)
                                                          cGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTTCCTGGCGATACCATTTCGCTGATTGGTACCACCCCTTTACGTATTGATTACAACGAGTTTGACGATAATCGAGTGACGGCag                                                                                                                                                                                                                         >  2:326371/1‑289 (MQ=255)
                                                          cGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCA‑CTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATCTTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTCCCTCTTGATTACAACGAGCTTCCCCATAATCGAGTGACCGCaca                                                                                                                                                                                                                        >  2:1848288/1‑287 (MQ=255)
                                                            tAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCagaa                                                                                                                                                                                                                       >  1:1442038/1‑289 (MQ=255)
                                                             aaCCATCTCACCTGCGAAACTCAGGGCCTTCCGGGACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATGGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCagaa                                                                                                                                                                                                                       <  2:1927088/288‑1 (MQ=255)
                                                                 atcccgccGGGGAAGCGCAGGCCCTTCATGCACCTGTCGTCGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGAATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGCTCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGt                                                                                                                                                                                                                  <  2:254306/283‑1 (MQ=255)
                                                                 aTCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGt                                                                                                                                                                                                                  <  1:1848944/289‑1 (MQ=255)
                                                                  tctcACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACgaga                                                                                                                                                                                                                                                 >  2:1757473/1‑257 (MQ=255)
                                                                  tcccACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGCTCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGGTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAC‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCCATACCATTTCGATGATTGGTACCACCCCTTTCCGTATTGATTACATCCATATTGACTATAACCCAGTGACGGCGCAAGAGGtg                                                                                                                                                                                                                 >  2:131391/4‑288 (MQ=255)
                                                                   ctcACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTg                                                                                                                                                                                                                <  1:1330178/289‑1 (MQ=255)
                                                                   ctcACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTg                                                                                                                                                                                                                <  2:1569868/289‑1 (MQ=255)
                                                                        cGGCGAACCTCAGGCCCTTCATGCACCTGTCGTGGTTAATGACGCTGTGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATAtt                                                                                                                                                                                                           <  2:1403918/289‑1 (MQ=255)
                                                                        cGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATAtt                                                                                                                                                                                                           <  2:698669/289‑1 (MQ=255)
                                                                              aaCTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTctgct                                                                                                                                                                                                      <  1:815973/288‑1 (MQ=255)
                                                                                        cTTCCTGGACCGGTCGGTGTTAATGCCGCTGGGATCTGGGGGCAACACAGTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAgggg                                                                                                                                                                                           <  2:1044303/289‑1 (MQ=255)
                                                                                          tCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGaa                                                                                                                                                                                         <  2:825415/289‑1 (MQ=255)
                                                                                                 ccTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGAtt                                                                                                                                                                                                                                                                                   <  2:1097503/192‑1 (MQ=255)
                                                                                                   tGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTgg                                                                                                                                                                                                                                                                                 >  2:935649/1‑192 (MQ=255)
                                                                                                    gTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGcc                                                                                                                                                                                >  2:1656208/1‑288 (MQ=255)
                                                                                                    gTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGcc                                                                                                                                                                                >  1:170770/1‑288 (MQ=255)
                                                                                                    gTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGcc                                                                                                                                                                                >  1:1673325/1‑288 (MQ=255)
                                                                                                    gTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGcc                                                                                                                                                                                >  2:36364/1‑288 (MQ=255)
                                                                                                               tGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCg                                                                                                                                                                    >  1:607474/1‑289 (MQ=255)
                                                                                                                    cTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGt                                                                                                                                                                                                                  >  2:943465/1‑238 (MQ=255)
                                                                                                                    cTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGt                                                                                                                                                                                                                  <  1:943465/238‑1 (MQ=255)
                                                                                                                    cTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAAc                                                                                                                                                               >  1:715221/1‑289 (MQ=255)
                                                                                                                            tGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCagaa                                                                                                                                                                                                                       <  1:1932927/225‑1 (MQ=255)
                                                                                                                               ggccAACACAGTGCCGAATATGCCGATCTGCGCATTCGCAGTTTCCCGGCGAAAGGCTCGCTGCTGATCATGGATCACCGCATTAACCATCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTg                                                                                                                                                     <  2:1662234/285‑1 (MQ=255)
                                                                                                                                 gCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGACCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCCGATTGGCACCACCTCTTTACGTATTGATTACCACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCCGCGGGAAGGGGAAAAACTGGGCCCCGTTATGGGGAAAACCCGCATTTTGCgg                                                                                                                                                  >  2:1443902/1‑289 (MQ=255)
                                                                                                                                  cAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCgg                                                                                                                                                  <  1:274898/288‑1 (MQ=255)
                                                                                                                                   aaCACATTGCCGAATATGGCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGccc                                                                                                                                                                               <  1:457727/258‑1 (MQ=255)
                                                                                                                                   aaCACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGc                                                                                                                                                <  2:1001846/289‑1 (MQ=255)
                                                                                                                                        aTTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTAtt                                                                                                                                           <  2:607474/289‑1 (MQ=255)
                                                                                                                                                             cgcATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTa                                                                                                                                                                                                                                                                >  2:1416375/1‑151 (MQ=255)
                                                                                                                                                             cgcATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAACCTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCGGGCTGTGC‑CCCGCCGGtt                                                                                                                      >  2:404801/1‑288 (MQ=255)
                                                                                                                                                             cgcATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAACCGCGCATTTTGCGGGCCTATTCTGGC‑TTGCGCCCgtgtgttg                                                                                                                     >  2:1742600/1‑282 (MQ=255)
                                                                                                                                                             cgcATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGtt                                                                                                                      >  2:454756/1‑288 (MQ=255)
                                                                                                                                                                 ttCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTGTTCTGGC‑GTGCGCCCGCTGGTTGCCAg                                                                                                                 <  1:1549768/289‑1 (MQ=255)
                                                                                                                                                                              ggCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCg                                                                                                    >  2:177972/1‑289 (MQ=255)
                                                                                                                                                                                 gAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAg                                                                                                  <  1:36364/288‑1 (MQ=255)
                                                                                                                                                                                 gAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAg                                                                                                  <  1:1765493/288‑1 (MQ=255)
                                                                                                                                                                                 gAAAGGATCGCTGATGATCATGGATCACCGCATTAAACAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAg                                                                                                  <  1:1476332/288‑1 (MQ=255)
                                                                                                                                                                                 agaaGGATGGCTACCGATCATGGATAGCCGCATTAACCAGCATGTGTTCAACCGCTGCCGTAA‑‑ACCGTCCGTCGCCGATATTCTGGTGCGTTGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGTGATTGACGATGAGCGAGTTACGGCAGAGGAGGTTGATATTTTGCTGCGTGAAGGGGAAAAACTGGCCCGCGGGAAGGCGAAAACGCGCATTTTGCTGGCCTATTCTGGC‑GTGCGACCGCTGGTTGCCAGCGATGACGACCCGAg                                                                                                  <  2:1019353/286‑1 (MQ=255)
                                                                                                                                                                                             gctgATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTc                                                                                     <  1:900303/289‑1 (MQ=255)
                                                                                                                                                                                                  tCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCg                                                                                <  1:1097665/289‑1 (MQ=255)
                                                                                                                                                                                                    aTGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTg                                                                              <  1:491741/289‑1 (MQ=255)
                                                                                                                                                                                                      ggATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTgg                                                                             >  1:221221/1‑288 (MQ=255)
                                                                                                                                                                                                        aTCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCa                                                                           <  2:715221/288‑1 (MQ=255)
                                                                                                                                                                                                           aCCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAAGGTCAGCCGGGGCCTCGt                                                                       >  2:773123/1‑289 (MQ=255)
                                                                                                                                                                                                           aCCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCg                                                                        >  2:1300192/1‑288 (MQ=255)
                                                                                                                                                                                                           aCCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTCCCCGCGATGACGACCCGAGCGGCCGTACCGTCCGCCGTTGCAt                                                                          >  2:1985341/1‑286 (MQ=255)
                                                                                                                                                                                                             cGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCTAGCGGACGTAACGTCAGCCCGGGCCTCGtg                                                                      >  2:1981096/1‑288 (MQ=255)
                                                                                                                                                                                                               cATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCg                                                                                                >  2:666265/1‑260 (MQ=255)
                                                                                                                                                                                                                 ttAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTgctgct                                                                 <  2:163347/289‑1 (MQ=255)
                                                                                                                                                                                                                  tAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTg                                                                                                                                                     <  1:1084986/205‑1 (MQ=255)
                                                                                                                                                                                                                          aTGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGGAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGGGGGCCTATTCTGGC‑GTGCGCCCCCTGGTTGCCAGCGCTGACGACCCGAGCGGACTTAACGTCAGCCGTGGCCTCGTGCTGCTCCACCATg                                                         >  2:340440/1‑288 (MQ=255)
                                                                                                                                                                                                                          aTGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATg                                                         <  1:1378509/288‑1 (MQ=255)
                                                                                                                                                                                                                          aTGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGGCAGCCGTGGCATCGTGCTGGTCGCCCAt                                                          >  2:54889/1‑287 (MQ=255)
                                                                                                                                                                                                                              gATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACCTAACGGCAGCCGTGGCATCGGTCTGCCCGACCATGCTGa                                                     >  2:1726399/1‑288 (MQ=255)
                                                                                                                                                                                                                                   aCCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGa                                               <  1:1907443/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGt                                           <  1:177972/288‑1 (MQ=255)
                                                                                                                                                                                                                                         gCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATga                                                                                                           >  2:617445/1‑223 (MQ=255)
                                                                                                                                                                                                                                         gCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATga                                                                                                           <  1:617445/223‑1 (MQ=255)
                                                                                                                                                                                                                                            gTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGa                                      <  1:1647968/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aa‑‑aCCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGAc                                     <  1:1983029/288‑1 (MQ=255)
                                                                                                                                                                                                                                              aa‑‑aCCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGAc                                     <  1:342216/288‑1 (MQ=255)
                                                                                                                                                                                                                                              aa‑‑aCCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACg                                    <  1:773123/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGAt                                 <  1:837802/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      tCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCTCTGGTTGCCAGCGATGACGACCCCATCGGACGTAACGTCAGCCCTGGCATCGTGCTGCCCGCCCATGCTTAACGCGATGGCCTGGACGGATTTa                              >  2:512044/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      tCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTa                              >  2:1661894/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      tCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTCGCATCGTGCTGCCCGACCACGCCGAACCCGATGGCCCGGCCGGAttt                               >  2:29831/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       ccGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAg                                                                                                                 >  2:472694/1‑205 (MQ=255)
                                                                                                                                                                                                                                                           cGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGTGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCCTCGTGCTGCTCGACCCTGCTGAACGCGATGGTCTGGACGGATTTttcac                          >  2:1177050/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              cGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTatcaccat                       >  1:1019175/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 tatTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTatcaccatcac                    <  1:594608/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                  atTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCg                  <  1:1661894/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCa            >  2:828030/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCTCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCaaa          >  2:215056/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCaa           >  1:1257122/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                            cTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCAAAc         <  2:176903/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCg                                                                        <  2:1524386/224‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTat                             >  1:932622/1‑267 (MQ=255)
                                                                                                                                                                                                                                                                             tGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAAAGTCAGCCGGGGCATCGTGCTGCCCGACCATGCTGAACGCGATGGTCTGGACGGATTTTTCACCATCCCCGGTGGCCAAAtg       >  2:1149221/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  aTACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCAAACTGATGAc  <  1:1149221/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
CGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGAAGCCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAA‑‑ACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTAGCCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGC‑GTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCAAACTGATGAC  >  CP042583/1924415‑1924975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A