Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 611,379 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583611,3790GC99.7% 830.6 / NA 347intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (154/192);  minor base T (0/1);  total (154/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,3800CG99.7% 821.1 / ‑6.0 347intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (154/192);  minor base A (0/1);  total (154/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01
*CP042583611,3810TA99.7% 824.0 / NA 347intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (153/192);  total (154/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 347 total aligned reads displayed.

AGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGACTAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGGCTCATATGAATATTAGCGGGATCGCCGCTGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCA  >  CP042583/611101‑611658
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                     
  cAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                                             >  1:2295543/1‑289 (MQ=255)
  cAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                                             >  1:1825771/1‑289 (MQ=255)
  cAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTg                                                                                                                                                                                                                                                                             >  1:2691741/1‑289 (MQ=255)
     attaaattTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGt                                                                                                                                                                                                                                                                            >  1:1130137/1‑287 (MQ=255)
         aattTACCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGcc                                                                                                                                                                                                                                                                      <  2:1859225/289‑1 (MQ=255)
              aCCAAAATCAATCACCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGccatccc                                                                                                                                                                                                                                                                 >  1:980836/1‑289 (MQ=255)
                  aaaTCACTCACCTGTGTTTCCAGTGAAATGGACAAATTGACGCTGGTATCCCACACGCGAATGGTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGTGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATcg                                                                                                                                                                                                                                                             <  2:2253001/289‑1 (MQ=255)
                    atcaatcaCCTGTGTTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATcgcg                                                                                                                                                                                                                                                           <  1:2738667/289‑1 (MQ=255)
                              tgttTTTCCGGTAAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCt                                                                                                                                                                                                                                                 <  1:1422177/289‑1 (MQ=255)
                                 gtTTCCGGTGAAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATTTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAg                                                                                                                                                                                                                                              <  1:1641981/289‑1 (MQ=255)
                                       ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                                                      >  1:787089/6‑275 (MQ=255)
                                       ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtat                                                                                                                                                                                                                                        >  1:47739/6‑289 (MQ=255)
                                       ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtat                                                                                                                                                                                                                                        <  2:1130137/284‑1 (MQ=255)
                                       ggtgaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtat                                                                                                                                                                                                                                        <  1:116941/284‑1 (MQ=255)
                                          gaaaTGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATaaa                                                                                                                                                                                                                                     <  1:1495233/287‑1 (MQ=255)
                                              tGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATc                                                                                                                                                                                                                                 <  2:2196457/289‑1 (MQ=255)
                                              tGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATc                                                                                                                                                                                                                                 <  1:2108446/289‑1 (MQ=255)
                                                     atggACGCTGCAATCCTGCCCGCGAATGTTGTCCAGACCAGTAATATTGTAGTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGTTATAGTCGCTACGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTc                                                                                                                                                                                                                          <  2:2547326/286‑1 (MQ=255)
                                                                   ccAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                                            <  2:8785/289‑1 (MQ=255)
                                                                   ccAGCACGCGAATGTTTTCCAGACCAGTAATAGTGTATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCATGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                                            <  1:2173322/289‑1 (MQ=255)
                                                                       cACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                                            <  1:224675/285‑1 (MQ=255)
                                                                            gAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTTAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGccatccca                                                                                                                                                                                                                                                                >  1:2274997/1‑228 (MQ=255)
                                                                                          ccAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGtata                                                                                                                                                                                                                                       >  1:2305589/1‑239 (MQ=255)
                                                                                                   tGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCgatgat                                                                                                                                                                                                                                                      >  2:191890/1‑215 (MQ=255)
                                                                                                   tGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAg                                                                                                                                                                              >  1:632357/1‑287 (MQ=255)
                                                                                                        tttCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGCCTGGCa                                                                                                                                                                       >  2:161465/1‑289 (MQ=255)
                                                                                                        tttCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                                                       >  2:31944/1‑289 (MQ=255)
                                                                                                        tttCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                                                       >  1:215211/1‑289 (MQ=255)
                                                                                                        tttCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACCGGCa                                                                                                                                                                       >  2:1440899/1‑289 (MQ=255)
                                                                                                        tttCAGGTTTTGAGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATGTCACGTATTTTGACGTATAACCGCATTCGAGCGAGAAAGGTACGAGACATATGAATATTAGCGGGCTAGCCCGGGCAAATTTTGTTCTGCCATCACATCGCGATGATCTGCTCAGGGGGATAAATATCAAGGTTCTTACTGTGTAAATCCCGGTTAGTTTTGCTGTGACTTTTGTCCAGACtacaa                                                                                                                                                                       >  2:2469544/1‑285 (MQ=255)
                                                                                                           cAGGTTTTGGTCAGTAGGGTCTTCGTTAACGCTACGCGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCg                                                                                                                                                                    <  2:1811930/289‑1 (MQ=255)
                                                                                                           cAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCg                                                                                                                                                                    >  1:2725186/1‑289 (MQ=255)
                                                                                                                tttGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                                                      >  2:2444497/1‑234 (MQ=255)
                                                                                                                tttGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                                                      <  1:2444497/234‑1 (MQ=255)
                                                                                                                tttGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                                                      >  2:377388/1‑234 (MQ=255)
                                                                                                                   gggCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGac                                                                                                                                                            >  2:753239/1‑289 (MQ=255)
                                                                                                                         tgggtttttCGTTATGACTCCCGGAACCGTCAAATTGAACGAGGTTATAGTCGCTAAGCGTACTTTGATAATCATGCGGGGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGtt                                                                                                                                                      <  2:1972753/282‑1 (MQ=255)
                                                                                                                         tAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGAt                                                                                                                                                                                                               <  1:2048984/232‑1 (MQ=255)
                                                                                                                          aGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGACATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGtt                                                                                                                                                      <  1:912598/288‑1 (MQ=255)
                                                                                                                                   gTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCAc                                                                                                                                             >  2:1881139/1‑288 (MQ=255)
                                                                                                                                       aCGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGa                                                                                                                                        >  1:576564/1‑289 (MQ=255)
                                                                                                                                        cGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                                            >  1:2382339/1‑220 (MQ=255)
                                                                                                                                         gCTACCGGCACCTCCAAATTGAACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGt                                                                                                                                      <  2:215211/289‑1 (MQ=255)
                                                                                                                                         gCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGt                                                                                                                                      <  1:187018/289‑1 (MQ=255)
                                                                                                                                            aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAatat                                                                                                                                                                                                                                  <  2:354627/194‑1 (MQ=255)
                                                                                                                                            aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTAc                                                                                                                                                                                                                      >  2:2703746/1‑206 (MQ=255)
                                                                                                                                            aCCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTTCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGa                                                                                                                                   >  2:278276/1‑289 (MQ=255)
                                                                                                                                                  aCCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCt                                                                                                                                                                                                                                                 >  2:702414/1‑173 (MQ=255)
                                                                                                                                                  aCCGTCAAATTGCACAGCGATATAGTCGCTAAGCGTACTTTGGTAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGAtaataa                                                                                                                             <  2:90542/289‑1 (MQ=255)
                                                                                                                                                     gTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATACTAACGa                                                                                                                          >  1:689837/1‑289 (MQ=255)
                                                                                                                                                      tCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                                           <  2:940693/255‑1 (MQ=255)
                                                                                                                                                          aTTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTg                                                                                                                     <  1:31092/289‑1 (MQ=255)
                                                                                                                                                               acgacgATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAccc                                                                                                                <  2:2359598/289‑1 (MQ=255)
                                                                                                                                                                cgacgaTATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAcccc                                                                                                               <  2:1679137/289‑1 (MQ=255)
                                                                                                                                                                aaaggaTATAGGCGCTAAGAGTAGTTTGATAATCATGCGGCGGCATTGCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAAGTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAccc                                                                                                                <  2:131809/284‑1 (MQ=255)
                                                                                                                                                                   cgaTATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGt                                                                                                                                                                                                       >  1:2635321/1‑198 (MQ=255)
                                                                                                                                                                   cgaTATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGt                                                                                                                                                                                                       <  2:2635321/198‑1 (MQ=255)
                                                                                                                                                                      tataGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATa                                                                                                         <  1:702128/289‑1 (MQ=255)
                                                                                                                                                                             gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                                           >  1:1538951/1‑232 (MQ=255)
                                                                                                                                                                             gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGaca                                                                                                                                                           <  2:1538951/232‑1 (MQ=255)
                                                                                                                                                                             gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGttt                                                                                                  >  2:1496137/1‑289 (MQ=255)
                                                                                                                                                                             gCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGttt                                                                                                  >  1:1351247/1‑289 (MQ=255)
                                                                                                                                                                               tAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTa                                                                                                 <  1:349538/288‑1 (MQ=255)
                                                                                                                                                                               tAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTa                                                                                                 >  1:1238646/1‑288 (MQ=255)
                                                                                                                                                                               tAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTAT‑AATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                                               <  1:2079379/289‑1 (MQ=255)
                                                                                                                                                                                taGCGTAATTTGTTAATCTTGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATCTGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                                               <  2:1246724/288‑1 (MQ=255)
                                                                                                                                                                                aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTa                                                                                                                                                                  >  2:806745/1‑222 (MQ=255)
                                                                                                                                                                                aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTa                                                                                                                                                                  <  1:806745/222‑1 (MQ=255)
                                                                                                                                                                                aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGa                                                                                                                                                             >  2:228112/1‑227 (MQ=255)
                                                                                                                                                                                aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                                               <  2:632357/289‑1 (MQ=255)
                                                                                                                                                                                aaGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCAGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                                               <  2:610743/289‑1 (MQ=255)
                                                                                                                                                                                     tACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                                                       <  2:2097600/212‑1 (MQ=255)
                                                                                                                                                                                             tAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATaca                                                                                                                                                                                                            >  1:110712/1‑167 (MQ=255)
                                                                                                                                                                                                tCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCa                                                                                                                                                                       <  1:321836/201‑1 (MQ=255)
                                                                                                                                                                                                 cATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                                                 <  2:1030829/158‑1 (MQ=255)
                                                                                                                                                                                                 cATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                                                 >  1:1030829/1‑158 (MQ=255)
                                                                                                                                                                                                                  cGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGt                                                             <  1:198516/289‑1 (MQ=255)
                                                                                                                                                                                                                         tGACGTATAACCGCATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTAtt                                                      >  2:253519/1‑289 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGt                                                                                                                                                                                                       >  1:1275332/1‑131 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGt                                                                                                                                                                                                       <  2:1275332/131‑1 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAccc                                                                                              <  1:1730483/236‑1 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTAcc                                                                                               >  2:2411295/1‑235 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAg                                         >  2:1730170/1‑289 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAg                                         >  1:409600/1‑289 (MQ=255)
                                                                                                                                                                                                                                      cATGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCACATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATACTGCACCCCCGGATAGGGGTTTCACCAGGCGTAGACATGCTCGCTTTTAACTTTGCCGTTGGTATTGTTGTCACAATAg                                         >  2:514078/1‑289 (MQ=255)
                                                                                                                                                                                                                                        tGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCt                                                                               <  1:363696/249‑1 (MQ=255)
                                                                                                                                                                                                                                        tGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATtgttgt                                                 >  2:1771356/1‑279 (MQ=255)
                                                                                                                                                                                                                                        tGCGAGCGAGAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATtgttgt                                                 <  1:1771356/279‑1 (MQ=255)
                                                                                                                                                                                                                                           gagcgagAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACggg                                    <  1:1304490/289‑1 (MQ=255)
                                                                                                                                                                                                                                            agcgggAAAGGTCGGGTACAGATGAATATTAGCGGGTTCGCCCGAGCAAATTTTGTTCTGCCATCCCATGTCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACggg                                    <  2:2074992/288‑1 (MQ=255)
                                                                                                                                                                                                                                            agcgagAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACggg                                    <  1:1630148/288‑1 (MQ=255)
                                                                                                                                                                                                                                            agcgagAAAGGTACGCGACATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGAAATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGa                                   >  2:1400759/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       tacgcgacATATGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCGTTCAAAGTTGCCTTTGGTATTGTTGTAACAATAGACGTGAAtttgacta                          >  2:1110424/8‑282 (MQ=255)
                                                                                                                                                                                                                                                                 atGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATa                                                                                                         >  1:2516379/1‑198 (MQ=255)
                                                                                                                                                                                                                                                                 atGAATATTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTcc              <  1:708873/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tatTAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGcc                                                               >  2:272871/1‑235 (MQ=255)
                                                                                                                                                                                                                                                                        ttAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAcc                                                                                                                 >  1:1903290/1‑183 (MQ=255)
                                                                                                                                                                                                                                                                         tAGCGGGATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                                                 <  2:461473/86‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gggATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGTTCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCa  <  1:2421206/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ggATCGCCCGAGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCg                                                                                                                                                                                                                 >  2:20206/1‑81 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                     
AGCAAATTAAATTTACCAAAATCAATCACCTGTGTTTCCGGACTAATGGAAAAATTGACGCTGCAATCCAGCACGCGAATGTTTTCCAGACCAGTAATATGATATTTCAGGTTTTGGGCAGTAGGGTCTTCGTTAACGCTACCGGCACCGTCAAATTGCACGACGATATAGTCGCTAAGCGTACTTTGATAATCATGCGGCGGCATTTCTCGTATTTTGACGTATAACCGCATGCGAGCGAGAAAGGTACGGCTCATATGAATATTAGCGGGATCGCCGCTGCAAATTTTGTTCTGCCATCCCATCGCGATGATCTGCTCAGGGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCA  >  CP042583/611101‑611658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A