Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 611,703 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583611,7030AT99.1% 781.5 / NA 332intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (181/147);  minor base G (2/1);  total (184/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,7040CG99.7% 785.1 / NA 332intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (183/148);  minor base A (1/0);  total (184/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP042583611,7050TA99.7% 793.2 / NA 332intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (183/148);  minor base C (1/0);  total (184/148)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 332 total aligned reads displayed.

GGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCACTTTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGAA  >  CP042583/611423‑611977
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                
gggTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTc                                                                                                                                                                                                                                                                            >  2:1993904/1‑289 (MQ=255)
     taAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACt                                                                                                                                                                                                                                                                        >  2:314275/1‑288 (MQ=255)
             aaTGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGccacca                                                                                                                                                                                                                                                               >  1:2072263/1‑289 (MQ=255)
             aaTGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcc                                                                                                                                                                                                                                                                   <  2:1760146/285‑1 (MQ=255)
                         gTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCaaaa                                                                                                                                                                                                                                                   >  2:1013626/1‑289 (MQ=255)
                          tCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAAt                                                                                                                                                                                                                                                  >  1:1963875/1‑289 (MQ=255)
                                    ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCa                                                                                                                                                                                                                                         >  1:227129/1‑288 (MQ=255)
                                     gTTAGTGTCGATGCGACTTTTTCCCAGACTGGAATCGTAATCGACAACGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTg                                                                                                                                                                                                                                                                       <  2:863313/257‑1 (MQ=255)
                                        aGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGcc                                                                                                                                                                                                                                    >  1:414364/1‑289 (MQ=255)
                                          tgtCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAAGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAg                                                                                                                                                                                                                                                <  2:249216/275‑1 (MQ=255)
                                           gtCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCAtt                                                                                                                                                                                                                                 >  1:1764693/1‑289 (MQ=255)
                                              gATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCa                                                                                                                                                                                                                              <  1:1672824/289‑1 (MQ=255)
                                               aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAg                                                                                                                                                                                                                             >  1:666964/1‑289 (MQ=255)
                                               aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGGCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGTCTGGTACAGCAAAAGGTTGATCAGCTTCTGATTGTTCTACTGCGCCAACAGATCTACCAAAATAGGTATTCAGCTCCCTTTCAg                                                                                                                                                                                                                             >  2:725081/1‑289 (MQ=255)
                                                                  tGGCATCGTAATCGCCACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                          <  1:725081/289‑1 (MQ=255)
                                                                   ggCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAAc                                                                                                                                                                                                         <  2:2072263/289‑1 (MQ=255)
                                                                                  acCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACt                                                                                                                                                                                                                                                                        >  2:422099/1‑211 (MQ=255)
                                                                                    cGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCa                                                                                                                                                                                                                                   <  1:1629773/246‑1 (MQ=255)
                                                                                    cGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGcaa                                                                                                                                                                                        >  2:585493/1‑289 (MQ=255)
                                                                                    cGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGATTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCa                                                                                                                                                                                                                              >  2:2176967/1‑251 (MQ=255)
                                                                                           tGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCTCCATTGCAGCCTTCAACGGAAGAAATAACAGGCAGGTGACGAGCACCAATc                                                                                                                                                                                   >  2:1582959/1‑287 (MQ=255)
                                                                                              cACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACCATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTAAGCGCCATTCCAGACTTCCACGGCCGAACAAACAGGCAAATCACGACCAACAAACCCtt                                                                                                                                                                               >  2:1341626/1‑288 (MQ=255)
                                                                                              cACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCtt                                                                                                                                                                               >  1:856924/1‑288 (MQ=255)
                                                                                               aCGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGc                                                                                                                                                                             <  1:1201365/289‑1 (MQ=255)
                                                                                                cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACg                                                                                                                                                                                                                    <  1:1411000/249‑1 (MQ=255)
                                                                                                cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                          >  1:1002796/1‑259 (MQ=255)
                                                                                                   cGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGc                                                                                                                                                                         >  1:873216/1‑289 (MQ=255)
                                                                                                     aGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGc                                                                                                                                                                         >  1:634105/1‑287 (MQ=255)
                                                                                                           taataaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCAtt                                                                                                                                                                  >  1:307360/1‑288 (MQ=255)
                                                                                                               aaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGc                                                                                                                                                              >  1:1741306/1‑288 (MQ=255)
                                                                                                               aaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGc                                                                                                                                                              >  1:1993252/1‑288 (MQ=255)
                                                                                                                    tCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCa                                                                                                                                                         >  1:1178747/1‑288 (MQ=255)
                                                                                                                    tCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCAc                                                                                                                                                        <  1:995876/289‑1 (MQ=255)
                                                                                                                              ccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCGAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTaa                                                                                                                                               >  1:1254101/1‑288 (MQ=255)
                                                                                                                              ccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAg                                                                                                                                                                                                                                                >  1:260353/1‑191 (MQ=255)
                                                                                                                              ccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTaa                                                                                                                                               >  2:1953916/1‑288 (MQ=255)
                                                                                                                                      gggTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAAGAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTg                                                                                                                                      >  1:1268134/1‑289 (MQ=255)
                                                                                                                                           tACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTcc                                                                                                                                   >  1:1385739/1‑287 (MQ=255)
                                                                                                                                           tACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCg                                                                                                                                  >  2:1085708/1‑288 (MQ=255)
                                                                                                                                             cccAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTg                                                                                                                               <  1:1557635/289‑1 (MQ=255)
                                                                                                                                             cccAGGCGTAGACATGCTCGCTTTCAAAGGTGCCGTTGGTATTGTTGTACCAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTg                                                                                                                               <  2:2153787/289‑1 (MQ=255)
                                                                                                                                                aGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                          <  2:1123086/211‑1 (MQ=255)
                                                                                                                                                aGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                          >  1:1123086/1‑211 (MQ=255)
                                                                                                                                                aGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAg                                                                                                                            >  1:1518925/1‑289 (MQ=255)
                                                                                                                                                 ggCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCCGCACTCATTTCGCCTCCACTGCTTGTAACCGGACTTGTCACCTGCAGt                                                                                                                           >  2:1565870/1‑289 (MQ=255)
                                                                                                                                                  gCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGtt                                                                                                                          >  2:132290/1‑289 (MQ=255)
                                                                                                                                                       gACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCTCCTCCACTTCTTGTAAACGGCATTGTCCCCTGCCGTTGAGcg                                                                                                                     >  2:1893126/1‑289 (MQ=255)
                                                                                                                                                            gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCAttt                                                                                                                                                                 >  1:769086/1‑240 (MQ=255)
                                                                                                                                                            gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCAc                                                                                                                                                        <  2:496124/249‑1 (MQ=255)
                                                                                                                                                            gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCAc                                                                                                                                                        >  1:496124/1‑249 (MQ=255)
                                                                                                                                                            gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                >  2:685401/1‑289 (MQ=255)
                                                                                                                                                             cTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCa                                                                                                               >  1:2156719/1‑289 (MQ=255)
                                                                                                                                                              tCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCAt                                                                                                              <  2:1741306/289‑1 (MQ=255)
                                                                                                                                                                          cagCCGTTGTTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATgcg                                                                                                    <  1:2196828/285‑1 (MQ=255)
                                                                                                                                                                           tGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATgcgc                                                                                                   <  1:149751/287‑1 (MQ=255)
                                                                                                                                                                             ccGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTa                                                                                                         <  1:1893491/279‑1 (MQ=255)
                                                                                                                                                                                  ggTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                          <  2:1518925/289‑1 (MQ=255)
                                                                                                                                                                                  ggTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCGTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                          <  2:899463/289‑1 (MQ=255)
                                                                                                                                                                                       tgttgtCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAAGAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCGGTTGAGCGTCGTCATTCGTAATGCGCCGTAATCATCCATg                                                                                     >  1:430640/1‑289 (MQ=255)
                                                                                                                                                                                           gtCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTaa                                                                                  >  1:1305734/1‑288 (MQ=255)
                                                                                                                                                                                           gtCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAAc                                                                                 <  2:1410530/289‑1 (MQ=255)
                                                                                                                                                                                             cacaATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCg                                                                               >  1:1348530/1‑289 (MQ=255)
                                                                                                                                                                                              acaATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCga                                                                              >  2:385835/1‑289 (MQ=255)
                                                                                                                                                                                                   aGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAAc                                                                                 >  1:1820973/1‑281 (MQ=255)
                                                                                                                                                                                                     aCGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATaaaa                                                                       >  2:699581/1‑289 (MQ=255)
                                                                                                                                                                                                       gggAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCGCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGCGCGTCGTCATTCGTAATTCCCCGTAATCCTCCACGTAAcctgcactaa                                                                        >  2:1839444/1‑278 (MQ=255)
                                                                                                                                                                                                          aaTTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                          >  2:622185/1‑265 (MQ=255)
                                                                                                                                                                                                          aaTTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGc                                                                  <  2:2209540/289‑1 (MQ=255)
                                                                                                                                                                                                             tttAATATCGTCAGCTTCCCTGAGTTTATCACCGGGTTTGGAATTGCCTGGTACAGCACACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGc                                                               <  2:363920/289‑1 (MQ=255)
                                                                                                                                                                                                                   atCGTTAGAATCCCCGATCTTATCCACGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCCGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCtat                                                         <  2:757594/289‑1 (MQ=255)
                                                                                                                                                                                                                   atCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCtat                                                         <  1:682443/289‑1 (MQ=255)
                                                                                                                                                                                                                           aTTCCCAGGTCTTATCCCGGGTTTTGTCATTGCCTGGTACAGCAAACGTTTGAATCGCTTATGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCAACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTcc                                                  <  2:1267983/288‑1 (MQ=255)
                                                                                                                                                                                                                            ttCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCAATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCCCTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCgg                                                <  1:1091719/289‑1 (MQ=255)
                                                                                                                                                                                                                              cccAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGATGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGgtg                                              <  1:2114417/289‑1 (MQ=255)
                                                                                                                                                                                                                               ccAGAACTTATCACCTGGTTTGGCATTGCCTGGTAAAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGCCTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCTTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGgtgt                                             <  2:1191077/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGTGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCa                                                                                                                                                         <  1:708647/172‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATg                                                                                                      <  1:530000/223‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                          >  2:1668339/1‑235 (MQ=255)
                                                                                                                                                                                                                                        aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                    <  1:326487/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTATCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCAGTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                    <  2:1362086/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGt                                >  1:535479/1‑288 (MQ=255)
                                                                                                                                                                                                                                               ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACt                             >  2:335663/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACt                             >  1:933351/1‑289 (MQ=255)
                                                                                                                                                                                                                                                gTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTa                                                                                                         <  2:1039929/212‑1 (MQ=255)
                                                                                                                                                                                                                                                 tttGGCATTGCCTGGTACAGAAACCGGTTGAATCGCTTCTGATTTTTCTACTGCGACACCAGATGTACAAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTa                            <  2:2229826/288‑1 (MQ=255)
                                                                                                                                                                                                                                                   tGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAATCGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTaaaa                         >  2:256058/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         ttccgtgTACAGCAAACGGTTGAATCTCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCa                   <  2:414364/283‑1 (MQ=255)
                                                                                                                                                                                                                                                          gCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATgcg                                                                                                    >  2:1798470/1‑207 (MQ=255)
                                                                                                                                                                                                                                                          gCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCtat                                                         <  2:1768606/250‑1 (MQ=255)
                                                                                                                                                                                                                                                          gCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                    >  2:676064/1‑271 (MQ=255)
                                                                                                                                                                                                                                                          gCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCACTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATTCGTAATGCGCCGTAATCATCCATTTAACAGAGATAAACCTGTCTGCCGCTATACCTTTCTGTGTTTCTGTTACACGTCCTACAAGTTGCa                   >  2:1171258/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 aCAGCAATCGGTTTAATCGCTTCTGATTTTTCTGCTGGTCCACCAGATGTACCGAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCa            <  2:94863/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aCAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCa            <  2:535479/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aCAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCAc           <  1:1055813/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGa                                                                                                                                                                                                  <  2:1469589/102‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTc                                                   <  1:586020/245‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTTTTGACCGTACTAAAAGGTGCAACCATCACGGtt       >  2:1254024/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     cAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCa            <  2:822682/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ggTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGc                                                               <  1:1025352/228‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ggTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGATGCCGCTATAACTTCCGGTGTTTGTGTTGAACGTAATAAAAGGTGCAACCATCACGGTTTTGaa  >  1:2020979/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                
GGGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCACTTTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGAA  >  CP042583/611423‑611977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A