Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 611,703 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583611,7030AT99.0% 939.5 / NA 394intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (209/180);  minor base G (2/2);  total (211/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,7040CG99.8% 934.8 / NA 394intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (210/182);  total (211/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,7050TA99.5% 937.1 / NA 393intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (208/182);  minor base C (1/1);  total (210/183)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 394 total aligned reads displayed.

GGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCACTTTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGAAGCCTG  >  CP042583/611424‑611982
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
         atCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCGAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcc                                                                                                                                                                                                                                                                        >  1:59523/1‑288 (MQ=255)
            aaTGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGccacca                                                                                                                                                                                                                                                                    >  1:1372533/1‑289 (MQ=255)
              tGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGa                                                                                                                                                                                                                                                                  <  1:1730170/289‑1 (MQ=255)
              tGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGAATTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGa                                                                                                                                                                                                                                                                  <  2:1832693/289‑1 (MQ=255)
              tGTTCTTACTGTCGATACACTGGTTAGTGACGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGa                                                                                                                                                                                                                                                                  <  1:939238/289‑1 (MQ=255)
                        gTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCA‑CCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAAt                                                                                                                                                                                                                                                       >  2:2688195/1‑289 (MQ=255)
                                   ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTTCATCAAACGGTTGAATAGCGTCTGATTTTTCTTCTTGGCTCCCTGCTGTACCAAACAAGCAGTTccc                                                                                                                                                                                                                                             >  2:1535805/1‑287 (MQ=255)
                                   ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCa                                                                                                                                                                                                                                              >  2:20267/1‑288 (MQ=255)
                                   ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCAACCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCTAAGATGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGCCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGCTTTTTCTATTGCGCCACCAGAGTTACCAAACTAGCAGTTCat                                                                                                                                                                                                                                             >  2:1910838/1‑288 (MQ=255)
                                       aGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAg                                                                                                                                                                                                                                                     >  2:2604845/1‑277 (MQ=255)
                                       aGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAg                                                                                                                                                                                                                                                     <  1:2604845/277‑1 (MQ=255)
                                         tgtCGATGCGACTTTTTCCCACACTGGAATCGGAATCGACAACCGTGTATGTCACGCCGAGTTGATAATAACGGTCCTGCACCCCCGGATAGGGGGTTAACCAGGCGTAGACATGCTAGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCCGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCa                                                                                                                                                                                                                                        <  2:701668/288‑1 (MQ=255)
                                          gtCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCCCCCCCAGCTGTCCCAAAATCGCCTTCCAGCGCCa                                                                                                                                                                                                                                        >  2:34891/1‑287 (MQ=255)
                                            cGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGc                                                                                                                                                                                                                                    >  2:1135934/1‑289 (MQ=255)
                                              aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAg                                                                                                                                                                                                                                  >  2:1977033/1‑289 (MQ=255)
                                                   aCTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcca                                                                                                                                                                                                                                                                       <  2:780662/247‑1 (MQ=255)
                                                       tttCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACg                                                                                                                                                                                                                         <  2:2427808/289‑1 (MQ=255)
                                                                              gaaacCGTTGTATGGCACGCCGAATTGATAAGAACGATCCTGCACACCCGGGTAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTAGCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCAGATTTTTATACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACg                                                                                                                                                                                                  <  2:1667797/286‑1 (MQ=255)
                                                                                     ttGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                               <  1:2125598/269‑1 (MQ=255)
                                                                                               cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTg                                                                                                                                                                                                                                                                            >  2:164129/1‑198 (MQ=255)
                                                                                               cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGcc                                                                                                                                                                                 >  1:129849/1‑289 (MQ=255)
                                                                                                gCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCa                                                                                                                                                                                >  1:1453436/1‑289 (MQ=255)
                                                                                                    aGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCa                                                                                                                                                                             >  2:1192470/1‑288 (MQ=255)
                                                                                                     gTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCAc                                                                                                                                                                            >  1:2486172/1‑288 (MQ=255)
                                                                                                        gATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCAt                                                                                                                                                                        <  1:767329/289‑1 (MQ=255)
                                                                                                          taataaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAg                                                                                                                                                                                                                     <  1:455275/242‑1 (MQ=255)
                                                                                                             taaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCGCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCGTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCATAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGc                                                                                                                                                                   <  1:2293288/289‑1 (MQ=255)
                                                                                                              aaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAg                                                                                                                                                                                                                                                     <  2:2381704/206‑1 (MQ=255)
                                                                                                                cGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGcc                                                                                                                                                                                 >  1:2664087/1‑272 (MQ=255)
                                                                                                                cGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGcc                                                                                                                                                                                 <  2:2664087/272‑1 (MQ=255)
                                                                                                                   tCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGc                                                                                                                                                                                                                       <  2:1159138/231‑1 (MQ=255)
                                                                                                                   tCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCa                                                                                                                                                                             <  1:1636926/273‑1 (MQ=255)
                                                                                                                    ccTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTAc                                                                                                                                                                                                                                                             >  2:2175914/1‑192 (MQ=255)
                                                                                                                    ccTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCCCCAc                                                                                                                                                             >  2:1116146/1‑288 (MQ=255)
                                                                                                                        cACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGccacca                                                                                                                                                                                                                                                                    <  1:238416/181‑1 (MQ=255)
                                                                                                                        cACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCtt                                                                                                                                                        >  1:275845/1‑289 (MQ=255)
                                                                                                                           ccccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAgg                                                                                                                                                                                                           <  1:1666817/235‑1 (MQ=255)
                                                                                                                                     gggTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTg                                                                                                                                           >  1:919528/1‑289 (MQ=255)
                                                                                                                                     gggTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTg                                                                                                                                           >  1:1023500/1‑289 (MQ=255)
                                                                                                                                               aGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTTTCACAATAGACGTGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCCAACGGTTGAATCGCGTCTGATTTTTCTACTACGCCAACATATGTACACACATAGAAGTTCAGCTCCATTGCAGACTTCAACGGCCGAAATAACAGGCAGATGACTAGCAACAATACCTTGCCAGCACTCAATTCCACTCCACTGCTTGTAAACGGCAGTGTACGATGCAg                                                                                                                                 >  2:2100495/1‑289 (MQ=255)
                                                                                                                                                ggCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACg                                                                                                                                                                                                  >  1:561791/1‑223 (MQ=255)
                                                                                                                                                ggCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACg                                                                                                                                                                                                  <  2:561791/223‑1 (MQ=255)
                                                                                                                                                 gCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTACACGGCATTGTCCGCTGCAGtt                                                                                                                               >  1:529309/1‑289 (MQ=255)
                                                                                                                                                   gTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGa                                                                                                                             <  2:1776909/289‑1 (MQ=255)
                                                                                                                                                      gACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAg                                                                                                                                                                                                                                                     >  1:879419/1‑166 (MQ=255)
                                                                                                                                                      gACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCg                                                                                                                                       <  2:922323/276‑1 (MQ=255)
                                                                                                                                                        cATGCTCGCTTTCAAAGTTGCCGTTTGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGcg                                                                                                                          <  1:1535805/287‑1 (MQ=255)
                                                                                                                                                        cATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGcg                                                                                                                          <  1:1135934/287‑1 (MQ=255)
                                                                                                                                                           gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGcgtcgt                                                                                                                      >  2:1249279/1‑288 (MQ=255)
                                                                                                                                                           gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     >  1:1309991/1‑289 (MQ=255)
                                                                                                                                                           gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     <  1:1249279/289‑1 (MQ=255)
                                                                                                                                                           gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     >  1:161367/1‑289 (MQ=255)
                                                                                                                                                           gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     >  1:324804/1‑289 (MQ=255)
                                                                                                                                                                       aGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATgcg                                                                                                         <  1:1798941/289‑1 (MQ=255)
                                                                                                                                                                           gCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAGCGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCCTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGt                                                                                                     >  2:1311959/1‑289 (MQ=255)
                                                                                                                                                                           gCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCg                                                                                                                                                                    >  1:2226267/1‑226 (MQ=255)
                                                                                                                                                                           gCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGt                                                                                                     >  2:123584/1‑289 (MQ=255)
                                                                                                                                                                                 ggTTTTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                               <  2:1351247/289‑1 (MQ=255)
                                                                                                                                                                                 ggTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                               <  2:86792/289‑1 (MQ=255)
                                                                                                                                                                                          gtCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTaa                                                                                       >  2:667732/1‑288 (MQ=255)
                                                                                                                                                                                            cacaATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCa                                                                                                                                              <  2:306865/231‑1 (MQ=255)
                                                                                                                                                                                             acaATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCga                                                                                   >  2:461214/1‑289 (MQ=255)
                                                                                                                                                                                                  aGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATaa                                                                              >  1:792869/1‑289 (MQ=255)
                                                                                                                                                                                                    aCGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATaaa                                                                             >  2:2309501/1‑288 (MQ=255)
                                                                                                                                                                                                     cGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTaaa                                                                                                                                                   >  1:374360/1‑217 (MQ=255)
                                                                                                                                                                                                      gggAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATaaa                                                                             >  2:1600168/1‑286 (MQ=255)
                                                                                                                                                                                                         aagtttAATATCGTCCGCTTCCCAGTACTTTTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACGGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGc                                                                       <  2:2270060/286‑1 (MQ=255)
                                                                                                                                                                                                         aaTTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTg                                                                         >  1:688387/1‑287 (MQ=255)
                                                                                                                                                                                                          atattAATATCGTCAGATTCCCAGATCTTATCACCTGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGACACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCTCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGc                                                                       <  1:1910838/285‑1 (MQ=255)
                                                                                                                                                                                                          aTTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGAGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGc                                                                       <  2:837646/288‑1 (MQ=255)
                                                                                                                                                                                                             ttAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAAc                                                                                      >  1:1208640/1‑270 (MQ=255)
                                                                                                                                                                                                                      tCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACt                                                          >  2:410157/1‑289 (MQ=255)
                                                                                                                                                                                                                      tCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACt                                                          >  1:71569/1‑289 (MQ=255)
                                                                                                                                                                                                                      tCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCA‑CAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCa                                                                                                                                              <  2:59467/204‑1 (MQ=255)
                                                                                                                                                                                                                           ttCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCgg                                                     <  2:625055/289‑1 (MQ=255)
                                                                                                                                                                                                                                  aTCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATTTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTtgt                                              >  1:1333357/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGTTTTTTTTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCCTTGCACACTTCTACGGCAGAAATAACAGGCAGATGACGATCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTAGTAAACGGCATTGTCCGCCGCAGTTGCGCGTCTTCATGCGTAATGTGCCGTAACCATCCATGGTCCCGAGATAAAACTGGCCGCCGCTATAACTTCTGGTGGTTGTGTTg                                          >  2:1500161/1‑288 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTc                                                                                                                                         >  1:2539448/1‑193 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTc                                                        <  1:1176223/274‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  1:1116146/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  1:1977033/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  2:2537445/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  2:54092/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aTCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGAAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  1:2066229/289‑1 (MQ=255)
                                                                                                                                                                                                                                            cGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCa                                                                                                                                                                                                                                   >  1:1519726/1‑98 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCa                                                                                                                                              >  1:1856211/1‑181 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCa                                                                                                                                              <  2:1856211/181‑1 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         >  2:1417532/1‑282 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  1:236253/282‑1 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         <  1:1417532/282‑1 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGa                                         >  2:236253/1‑282 (MQ=255)
                                                                                                                                                                                                                                              ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACt                                  >  1:394068/1‑289 (MQ=255)
                                                                                                                                                                                                                                               gTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACt                                  <  1:667732/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               tACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATc                  >  1:623449/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                aCAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCa                 <  1:2444080/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                aCAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCa                 <  2:725030/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 taGCAAAGGGTTGGATCGCTTCTAATTTTTCTGCTCCGCCACCGGATGTATCAAAATAGCAGTTCAGCGCCAGTGCAGACTTCAACGGGAGAAATAACAGGCAGATGACGGGCAACAATCCCTCGCCAGCACTTATTGCGCCTCCACTGCTTGTAAAGGTCATTGTCCCCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAGAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTTACCGTACTAAAAGGTGCAACCATCACg               <  2:1302134/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATcc                                                                                                                                                                                       >  1:183318/1‑118 (MQ=255)
                                                                                                                                                                                                                                                                         ggTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGgtgt                                                  >  1:2681473/1‑246 (MQ=255)
                                                                                                                                                                                                                                                                           ttGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAAc                                                                                      <  1:1753037/208‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
GGTATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCACTTTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGAAGCCTG  >  CP042583/611424‑611982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A