Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 611,703 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583611,7030AT99.7% 754.3 / NA 320intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (184/135);  minor base G (1/0);  total (185/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583611,7040CG99.4% 757.8 / NA 320intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (185/133);  minor base A (0/2);  total (185/135)
Fisher's exact test for biased strand distribution p-value = 1.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583611,7050TA99.7% 755.5 / NA 320intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (184/134);  total (185/135)
Fisher's exact test for biased strand distribution p-value = 4.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 320 total aligned reads displayed.

TATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCACTTTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGAAGCCTG  >  CP042583/611426‑611982
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
tataAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGACTCGCTTCTGATTTTTCt                                                                                                                                                                                                                                                                                >  2:755434/1‑287 (MQ=255)
 ataAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACt                                                                                                                                                                                                                                                                             <  1:314126/289‑1 (MQ=255)
  taAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATCTCGTCAGATTCCCAGATCTTATCCCCGGG‑TTGGCATTGACTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTgc                                                                                                                                                                                                                                                                           >  2:73738/1‑289 (MQ=255)
  taAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACt                                                                                                                                                                                                                                                                             >  2:1777115/1‑288 (MQ=255)
       atCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcc                                                                                                                                                                                                                                                                        >  1:705906/1‑288 (MQ=255)
       atCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcc                                                                                                                                                                                                                                                                        >  1:176170/1‑288 (MQ=255)
       atCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcc                                                                                                                                                                                                                                                                        >  1:1407928/1‑288 (MQ=255)
        tCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGcca                                                                                                                                                                                                                                                                       >  2:464699/1‑288 (MQ=255)
            tGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGa                                                                                                                                                                                                                                                                  >  1:431357/1‑289 (MQ=255)
                 ttACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTAc                                                                                                                                                                                                                                                             <  2:431357/289‑1 (MQ=255)
                   aCTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCa                                                                                                                                                                                                                                                           >  1:866896/1‑289 (MQ=255)
                          aTACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTTCTGCGCCACCAGATGTACAAAAATaac                                                                                                                                                                                                                                                    >  2:1194532/1‑287 (MQ=255)
                                 ttttAGTGTCGTTGTGACTTTTTCCCAGACTTGCATCGTAATCGAAACCGTTGTAGGTCACGCCGAGTTGATAATCACGTTCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAg                                                                                                                                                                                                                                             <  2:778199/287‑1 (MQ=255)
                                 ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCa                                                                                                                                                                                                                                              >  1:236073/1‑288 (MQ=255)
                                 ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCa                                                                                                                                                                                                                                              >  2:263621/1‑288 (MQ=255)
                                 ggTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCa                                                                                                                                                                                                                                              >  1:755032/1‑288 (MQ=255)
                                   ttAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAgc                                                                                                                                                                                                                                            >  1:1553665/1‑288 (MQ=255)
                                     aGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGcc                                                                                                                                                                                                                                         >  2:1895796/1‑289 (MQ=255)
                                       tgtCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCCAAATAGCAGTTCAGGCCCAt                                                                                                                                                                                                                                       >  2:1302149/1‑289 (MQ=255)
                                           gATGCGACTTTTTCCCAGACTGGCCTCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCa                                                                                                                                                                                                                                   <  1:1676097/289‑1 (MQ=255)
                                            aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATTCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGCTCTTATCACCGGGTTTGGCATTTCCTGGTACAGCAAACGGTTGAAACGCGTCTGATTTTTCTAATGCGCCCCCAGATTGACCCAAATCGCAGTCCAGCGCCAATACAg                                                                                                                                                                                                                                  >  2:27219/1‑289 (MQ=255)
                                            aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCTCCACCAGCTGGACCAAAATAGCAGTTCAGCGCCATTGCAg                                                                                                                                                                                                                                  >  2:133441/1‑289 (MQ=255)
                                            aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCa                                                                                                                                                                                                                                   >  1:539850/1‑288 (MQ=255)
                                            aTGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAg                                                                                                                                                                                                                                  >  1:527009/1‑289 (MQ=255)
                                             tGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAg                                                                                                                                                                                                                                  >  2:1045612/1‑288 (MQ=255)
                                                     tttCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACg                                                                                                                                                                                                                         <  1:478207/289‑1 (MQ=255)
                                                               tGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                               <  2:928000/289‑1 (MQ=255)
                                                                       tAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGa                                                                                                                                                                                                       >  1:645101/1‑289 (MQ=255)
                                                                           cGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGATGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGAc                                                                                                                                                                                                   <  2:220331/289‑1 (MQ=255)
                                                                               acCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGACAGAAATAACAGGCAGTTGCCGAga                                                                                                                                                                                               >  2:1404540/1‑288 (MQ=255)
                                                                                  gTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGcaac                                                                                                                                                                                            <  1:1194532/289‑1 (MQ=255)
                                                                                    tGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAAAAGGCAGATAACGAGcaaaac                                                                                                                                                                                          >  2:1646190/1‑286 (MQ=255)
                                                                                         gTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAGTATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCt                                                                                                                                                                                     <  2:236073/289‑1 (MQ=255)
                                                                                             cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                               >  1:447415/1‑259 (MQ=255)
                                                                                             cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATaa                                                                                                                                                                                                               <  2:447415/259‑1 (MQ=255)
                                                                                             cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACCGGCAGATGACGAGCAACAATCCCTTGcc                                                                                                                                                                                 >  1:1916868/1‑289 (MQ=255)
                                                                                             cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAGCAATACCTTGc                                                                                                                                                                                  >  1:413401/1‑288 (MQ=255)
                                                                                             cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGcc                                                                                                                                                                                 >  1:1596733/1‑289 (MQ=255)
                                                                                             cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGcc                                                                                                                                                                                 >  1:84599/1‑289 (MQ=255)
                                                                                              gCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCa                                                                                                                                                                                >  2:1578359/1‑289 (MQ=255)
                                                                                                 gAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCa                                                                                                                                                                             <  2:697673/289‑1 (MQ=255)
                                                                                                      gATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCAt                                                                                                                                                                        <  2:1141650/289‑1 (MQ=255)
                                                                                                        taataaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCAtt                                                                                                                                                                       >  2:111634/1‑288 (MQ=255)
                                                                                                            aaCGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCAt                                                                                                                                                                        <  1:1942805/283‑1 (MQ=255)
                                                                                                                 tCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGCCGACCAACAATCCCTTGCCAGCACCAATTTCGCCTCCa                                                                                                                                                              >  2:1677438/1‑288 (MQ=255)
                                                                                                                 tCCTACAACCCCGGATAGGGGTTTACCCAGGCGTAGACATGATCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCAc                                                                                                                                                             <  2:72742/289‑1 (MQ=255)
                                                                                                                  ccTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAACTAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTcc                                                                                                                                                               >  2:106222/1‑286 (MQ=255)
                                                                                                                         ccccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTa                                                                                                                                                     >  1:933479/1‑289 (MQ=255)
                                                                                                                           ccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTaaa                                                                                                                                                   <  1:1101924/289‑1 (MQ=255)
                                                                                                                           ccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTaa                                                                                                                                                    >  1:1120356/1‑288 (MQ=255)
                                                                                                                           ccGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATCTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGAAGATGACGAGCAACAACCCCTTGCCAGCCCTCATTTCTCCTCCACTGCTTGTaaa                                                                                                                                                   >  2:1079967/1‑289 (MQ=255)
                                                                                                                                        tACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATCTCGTCAGACTCCAAGCTCTTATCACCGGGTTTGGCATTGGCTGGTACACCAAACGGTTGAATCGCTTCTGATTTTTCTCCTGCGCCACCAGCTGTACCAAAATAGCCGTTCAGTGCCATTGCTGAATTCAACGGCAGAAATACAAGGCAGATGACGAGCAACAATTCATTGCCAGCACTCATTTCCCCTCTACTGCTCGTTAACAGCAtttcccg                                                                                                                                       >  2:199244/1‑283 (MQ=255)
                                                                                                                                        tACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTcc                                                                                                                                        >  1:909236/1‑287 (MQ=255)
                                                                                                                                          cccTGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCATATCTTATCACCGGGTTTGGCATTACCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTg                                                                                                                                    <  1:1164626/289‑1 (MQ=255)
                                                                                                                                             aGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAg                                                                                                                                 >  1:813793/1‑289 (MQ=255)
                                                                                                                                              ggCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGt                                                                                                                                >  1:1060365/1‑289 (MQ=255)
                                                                                                                                               gCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGc                                                                                                                                                                   >  1:1220469/1‑253 (MQ=255)
                                                                                                                                                cGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCGTTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGtt                                                                                                                               <  2:377478/288‑1 (MQ=255)
                                                                                                                                                cGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGtt                                                                                                                               <  2:1553665/288‑1 (MQ=255)
                                                                                                                                                    gACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTTATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGcg                                                                                                                          >  1:1003700/1‑289 (MQ=255)
                                                                                                                                                         gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     >  2:1393646/1‑289 (MQ=255)
                                                                                                                                                         gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     <  2:1454570/289‑1 (MQ=255)
                                                                                                                                                         gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCgtcgtc                                                                                                                     >  2:810101/1‑289 (MQ=255)
                                                                                                                                                         gCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATACCTTGCCAGCCCTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCCCTGCAGTTGAGcgctct                                                                                                                      >  2:576851/1‑284 (MQ=255)
                                                                                                                                                          cTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTc                                                                                                                                                                                                                                               >  1:1485676/1‑166 (MQ=255)
                                                                                                                                                          cTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGcaac                                                                                                                                                                                            <  1:1240974/217‑1 (MQ=255)
                                                                                                                                                          cTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGcaac                                                                                                                                                                                            >  2:1240974/1‑217 (MQ=255)
                                                                                                                                                               tttCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACCGCTTGTAAAGCGCATTGTCCCCTGCAGTTGAGCGACGTCACGcct                                                                                                               >  2:488415/1‑287 (MQ=255)
                                                                                                                                                                ttCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTa                                                                                                              <  2:176170/289‑1 (MQ=255)
                                                                                                                                                                ttCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTa                                                                                                              <  1:210133/289‑1 (MQ=255)
                                                                                                                                                                     aGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATgcg                                                                                                         <  1:621398/289‑1 (MQ=255)
                                                                                                                                                                         gCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGt                                                                                                     >  1:386268/1‑289 (MQ=255)
                                                                                                                                                                         gCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGt                                                                                                     >  2:63862/1‑289 (MQ=255)
                                                                                                                                                                         gCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCCCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCCGAAATAACAGGCAGATGCCGAGCAACAATCCCTTCCCAGCACTCATTTCACCTCCCCTGCTTGTAAACGGCATTGTCCGCTTCCGTTCATCGTCGTCATGCCTCATGCGCCgc                                                                                                     >  2:1411542/1‑288 (MQ=255)
                                                                                                                                                                               ggTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                               <  2:84599/289‑1 (MQ=255)
                                                                                                                                                                                gTATTGTTGTCAAAATAGACGGGAATTGTAATATCGTCAGATTCCCAGATCCTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAatcat                                                                                               <  1:1393160/288‑1 (MQ=255)
                                                                                                                                                                                 tATTGTTGTCAAAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAATATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATcc                                                                                             <  1:1048410/289‑1 (MQ=255)
                                                                                                                                                                                   ttgttgTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCAt                                                                                           <  2:866896/289‑1 (MQ=255)
                                                                                                                                                                                        gtCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAAc                                                                                      <  1:1826124/289‑1 (MQ=255)
                                                                                                                                                                                        gtCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCAACTGCTGGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGCCATCCGTACTGCCCCGTATTCATCCAGGTaa                                                                                       >  2:1001964/1‑288 (MQ=255)
                                                                                                                                                                                                  aCGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTg                                                                                                                                    >  2:1802901/1‑233 (MQ=255)
                                                                                                                                                                                                  aCGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTg                                                                                                                                    <  1:1802901/233‑1 (MQ=255)
                                                                                                                                                                                                         ttttAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCt                                                                      >  1:1465931/1‑288 (MQ=255)
                                                                                                                                                                                                         ttttAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTg                                                                     <  1:133441/289‑1 (MQ=255)
                                                                                                                                                                                                                  cGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATaa                                                            >  1:51687/1‑289 (MQ=255)
                                                                                                                                                                                                                            ccAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGgtgt                                                  <  1:27219/289‑1 (MQ=255)
                                                                                                                                                                                                                                aTCTTATCACCGGTTTTTGCATTGCCTGGTACAGCAAACGGTTGAATCACTTCTGATTTTTCTACTGCGCCACCAGATTTACCAAAATAGTAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCAc                                                                                                                                                             <  1:1634226/178‑1 (MQ=255)
                                                                                                                                                                                                                                  cTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTgtgt                                            >  1:55325/1‑289 (MQ=255)
                                                                                                                                                                                                                                      tCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATCTAACCGAGATAAAACTGGCTTCCGCTATAACTGCCGGTGTTTGTGTTGa                                         >  2:28842/1‑288 (MQ=255)
                                                                                                                                                                                                                                       cACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGAcc                                       <  1:1777888/289‑1 (MQ=255)
                                                                                                                                                                                                                                          cGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGt                                     >  1:663613/1‑288 (MQ=255)
                                                                                                                                                                                                                                          agtgTTTGGCATTGACTGGTACAGCAACCGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGAAGTTCAGCGCTATTGCAGACTTCATCGGCAGAAATAACCGGCAGATGAAGAGCAACAAACTATTGCCAGCACTCATTTAGCATCTACTGCTTGTaca                                                                                                                                                   >  2:1634226/4‑176 (MQ=255)
                                                                                                                                                                                                                                           gggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGcg                                                                                                                          <  1:1417757/202‑1 (MQ=255)
                                                                                                                                                                                                                                            ggTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACt                                  >  1:1522315/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 ggCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCCATACCTTCCGGTGTTTGTGGTGACCTGACTAAAAg                             >  2:1489688/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     ttGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGc                         <  2:38958/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      tGCCTGGTACAGCAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCa                        <  2:909236/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cAAACGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAAc                                                                                      >  1:1311633/1‑215 (MQ=255)
                                                                                                                                                                                                                                                                      cGGTTGAATCGCTTCTGATTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGa        >  2:540620/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         ttGAATCTCTTCTGATTTTCCTACTACGCCTCCAGATGTACCAACATAGCAGTTCAGCGCCATTGCAGACTTCCACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTACCCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTg         <  2:524680/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
TATAAATATCAATGTTCTTACTGTCGATACACTGGTTAGTGTCGATGCGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATCTTATCACCGGGTTTGGCATTGCCTGGTACAGCAAACGGTTGAATCGCTTCACTTTTTTCTACTGCGCCACCAGATGTACCAAAATAGCAGTTCAGCGCCATTGCAGACTTCAACGGCAGAAATAACAGGCAGATGACGAGCAACAATCCCTTGCCAGCACTCATTTCGCCTCCACTGCTTGTAAACGGCATTGTCCGCTGCAGTTGAGCGTCGTCATGCGTAATGCGCCGTAATCATCCATGTAACCGAGATAAAACTGGCTGCCGCTATAACTTCCGGTGTTTGTGTTGACCGTACTAAAAGGTGCAACCATCACGGTTTTGAAGCCTG  >  CP042583/611426‑611982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A