Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 755,224 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583755,2240AT98.9% 656.9 / NA 278intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (125/149);  minor base G (0/3);  total (126/152)
Fisher's exact test for biased strand distribution p-value = 2.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583755,2250GC100.0% 656.6 / NA 278intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (126/152);  total (126/152)
*CP042583755,2260CG99.6% 666.8 / NA 278intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (125/152);  total (126/152)
Fisher's exact test for biased strand distribution p-value = 4.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 278 total aligned reads displayed.

GGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGAGCG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATAGCCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAA‑GAGGGCGATTTTCGTTCCAATTTGCA  >  CP042583/754944‑755504
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                       
      aaTTCTTGATCCGCTTTCTTGCTACATGAACATAAGTCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATAcc                                                                                                                                                                                                                                                                             <  2:2711972/289‑1 (MQ=255)
                ccGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTaa                                                                                                                                                                                                                                                                   <  1:1495242/289‑1 (MQ=255)
                     ttCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGAc                                                                                                                                                                                                                                                              <  1:2215660/289‑1 (MQ=255)
                                tGAACATAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggtgg                                                                                                                                                                                                                                                   <  1:1016664/289‑1 (MQ=255)
                                  aaCATAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCggtggt                                                                                                                                                                                                                                                  >  1:202446/1‑288 (MQ=255)
                                   aCAGAAATCCGGCGGCGTCTCCAATTCA‑CTACAAGGGCCGCAAGTACCGCCATTTTGACGCAGGGATCCCGCGTATTGGCACCGCCATTGCCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGgtggtg                                                                                                                                                                                                                                                 <  1:1223831/288‑1 (MQ=255)
                                     aTAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGt                                                                                                                                                                                                                                                         >  1:1974793/1‑278 (MQ=255)
                                          tCCTGCGGAGTCTT‑TCTTGACCTACCACGGCCGCAAGTTACCCCATTTTGACGCATGGATCCCGCGTATTGGCACCGCAATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCtg                                                                                                                                                                                                                                         <  2:2332434/289‑1 (MQ=255)
                                              gcggcgTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCtggtgg                                                                                                                                                                                                                                     >  2:1043879/1‑289 (MQ=255)
                                                    tcttctATTCC‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAAATGCTGGCGCGTCAGGGCATCGACCTGCCTGTCCCGGGCATTGCGCATTCGCCGGCTGATACCAGCGATTTAATCGACATCGTCGGTGGTGCGCCGCTGGCGGTcctgg                                                                                                                                                                                                                               >  1:2460321/1‑285 (MQ=255)
                                                        ctATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAgttggt                                                                                                                                                                                                                           <  1:1729196/289‑1 (MQ=255)
                                                                 tACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGCCATGGTCGGTGGTTCGCCGCTGGTGGCCAAGTTGGTTGAAGGc                                                                                                                                                                                                                    >  2:550298/1‑288 (MQ=255)
                                                                 tACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGc                                                                                                                                                                                                                    >  1:1593271/1‑288 (MQ=255)
                                                                 tACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCa                                                                                                                                                                                                                   <  2:274291/289‑1 (MQ=255)
                                                                 tACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCGGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACTTGGGCGGTGGTGCTCCGCTGGGGGTCCATGTGGTTGAAGGc                                                                                                                                                                                                                    >  2:1096483/1‑288 (MQ=255)
                                                                     aaGGACGCAGGTAACCCCATTTTGGCGTAGTTGTCCCGCGTATTGGCAACGCCATTACCTTTTAT‑GGTCAGCGGCCACTGCGCCTGTTCGGGAGGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGCCCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCa                                                                                                                                                                                                               <  2:2093352/289‑1 (MQ=255)
                                                                      aGGCCGGAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCATGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAg                                                                                                                                                                                                              <  1:127035/289‑1 (MQ=255)
                                                                      aGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTgcgc                                                                                                                                                                                                                                              <  2:1862352/257‑1 (MQ=255)
                                                                      aGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTgcgc                                                                                                                                                                                                                                              >  1:1862352/1‑257 (MQ=255)
                                                                      aGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTgcgc                                                                                                                                                                                                                                              >  1:1164028/1‑257 (MQ=255)
                                                                           gCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAAt                                                                                                                                                                                                         >  1:1554452/1‑289 (MQ=255)
                                                                           gCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTCCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGTTGGTGCGCCGCTGGTGGTCAAGTTGGTTTAAGTCACGCAGGGCAt                                                                                                                                                                                                         >  2:2111332/1‑289 (MQ=255)
                                                                           gCAAGTTACCCCATTTTGACGCAGCGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGATCGAGATGCCGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATCCAACTGCCGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCCTTGCGCATCCGACGGATGATACCCGCTCTTTACTCGACACTGCCGGTGGTGCCCCGACGGCGCCCAAGGTGGGTGCACGCACGCAGGGaag                                                                                                                                                                                                         >  2:2038751/1‑288 (MQ=255)
                                                                                ttACCCCGTGTTGACGCAGTGATCCCGCGTATTGGCACCGCCGTTACCTTTTGTGGGACGGCGG‑CACTGCGCCAGTTCGGGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGcg                                                                                                                                                                                                    <  2:2495157/289‑1 (MQ=255)
                                                                                     cctttttGACGCATGGATCCCGCGTATTGGCACCGCCGTTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTg                                                                                                                                                                                               <  2:215368/286‑1 (MQ=255)
                                                                                        ttttGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCCAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTg                                                                                                                                                                                            >  2:1440803/1‑289 (MQ=255)
                                                                                         tttGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGGGGTCAAGTTGGTTGACGGCACGCAGGGAATTGGCGTCGTGCggg                                                                                                                                                                                           >  1:2244476/1‑289 (MQ=255)
                                                                                             aCGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGt                                                                                                                                                                                                                                                         <  2:1720360/223‑1 (MQ=255)
                                                                                               gCAGTGATCCCGCGTATTGGCACCTCCATTACCTTGTATGGGACGGCGG‑CACTGCGCCAGTTCGATATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGgaga                                                                                                                                                                                     <  1:2365746/289‑1 (MQ=255)
                                                                                                 aGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGcgtcg                                                                                                                                                                                                 <  1:1397856/275‑1 (MQ=255)
                                                                                                   tGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGcg                                                                                                                                                                                                    >  1:1948444/1‑270 (MQ=255)
                                                                                                         cgcgTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAggc                                                                                                                                                                           <  1:2105542/289‑1 (MQ=255)
                                                                                                           cgTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAg                                                                                                                                                                                                                                <  1:1182617/234‑1 (MQ=255)
                                                                                                             tATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCa                                                                                                                                                                                                               <  2:2248759/249‑1 (MQ=255)
                                                                                                                    accgcgattgaggtttAGGGGACGGCGG‑CACTGCGCCAGTTGGCGTTGCTGGGGAGCTATCCGCTCAGTGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATGCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 <  2:2644936/275‑1 (MQ=255)
                                                                                                                    aCCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 <  1:1440803/288‑1 (MQ=255)
                                                                                                                     ccGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAAt                                                                                                                                                                                                         <  2:1566461/247‑1 (MQ=255)
                                                                                                                       gCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGGTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGa                                                                                                                                                             >  1:2429866/1‑289 (MQ=255)
                                                                                                                        ccATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTg                                                                                                                                                                                               <  2:19574/254‑1 (MQ=255)
                                                                                                                                  ttATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCCCGGGCATTGCGCATTCGCCGGCTGATACCCGCGATCTAATCGACATGGTCGGTGGTGCGCCGCTGGGGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCCGGGCGCGGAAAGCGGGGTTGAGGCttt                                                                                                                                                   >  2:2234617/1‑288 (MQ=255)
                                                                                                                                  ttATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTgcgc                                                                                                                                                                                                                                              <  2:2510150/197‑1 (MQ=255)
                                                                                                                                   tATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTTGCGTCGTGCTGGCGGAGACGCGGCAGGCGGGGGGAAGGGTGGTTGAGGCGTTcc                                                                                                                                                 >  1:735089/1‑289 (MQ=255)
                                                                                                                                         aCGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAg                                                                                                                                                                                                              <  1:2289755/222‑1 (MQ=255)
                                                                                                                                         aCGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGGCACGGGCATCGCGCATTCGCCGGATGATACCAGCGATCTAATCGAACTGTTCGGTGGTGCGCTGCGGGTGGTCACGTTGGTTGCAGGCAAGAAGGTAGTTGGCGGCGGTGTGTCGTAGACGCGTCAGGGCGCGGCAAGCGTGATTGACGcgtatcgtggtg                                                                                                                                           >  2:135816/1‑278 (MQ=255)
                                                                                                                                                   cTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGGGACGCGTCCGGCGGCGGAAAGCGGTGTTGACGCTTTCcgctggctcttctcca                                                                                                                                  >  2:1179763/1‑276 (MQ=255)
                                                                                                                                                   cTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACgcgc                                                                                                                                  <  1:30727/289‑1 (MQ=255)
                                                                                                                                                    tGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGGCAGGCGGCGGAAAGCGTGAGTGACGCGTTCCGCGGTCGGAACgcgc                                                                                                                                  >  2:948568/1‑288 (MQ=255)
                                                                                                                                                        ccAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCcg                                                                                                                                                <  1:381165/270‑1 (MQ=255)
                                                                                                                                                         cAGTTCGAGATGCTGGGGGGCTATCCGCTCAATGAGTCGG‑TGGCCATTGCCCGGGGGCGTGACAAATTGCGTTCCAGGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTTAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTc                                                                                                                            <  2:1979071/289‑1 (MQ=255)
                                                                                                                                                         cAGTTCGAGATGCTGGGGAGCTATCCGTTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTc                                                                                                                            <  1:2527226/289‑1 (MQ=255)
                                                                                                                                                              cGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTg                                                                                                                       <  1:1118516/289‑1 (MQ=255)
                                                                                                                                                              cGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTg                                                                                                                       <  1:204427/289‑1 (MQ=255)
                                                                                                                                                                agaTGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGt                                                                                                                                                                                                                                                         >  2:1228950/1‑157 (MQ=255)
                                                                                                                                                                agaTGCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGaa                                                                                                                                       <  2:2556175/271‑1 (MQ=255)
                                                                                                                                                                   tGCTGGGGAGCTATCCGCTCAATGGGTCGG‑TCGCCATTGCCCGAGCGAGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGa                                                                                                                  <  1:2191854/289‑1 (MQ=255)
                                                                                                                                                                    gCTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGaa                                                                                                                 <  1:846877/289‑1 (MQ=255)
                                                                                                                                                                    gCTGGGGAGCTAGCCCCTCAA‑GAGGTCGTTCGCCATTGCCCTGGCGCGTGACAATTTGCGTTCCATGCAACTGCTGGCGCGTAAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGa                                                                                                                  <  2:1888201/288‑1 (MQ=255)
                                                                                                                                                                     cTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGgag                                                                                                                                                                                      >  2:1666143/1‑219 (MQ=255)
                                                                                                                                                                     cTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGgag                                                                                                                                                                                      <  1:1666143/219‑1 (MQ=255)
                                                                                                                                                                     cTGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAat                                                                                                                >  1:2137009/1‑289 (MQ=255)
                                                                                                                                                                      tGGGGAGCTATCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACgcgc                                                                                                                                  <  1:693252/270‑1 (MQ=255)
                                                                                                                                                                              tATCCGCTCAATGGGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAag                                                                                                       <  1:680532/289‑1 (MQ=255)
                                                                                                                                                                               aTCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTGCGCGGTCTGAACGCCCATATTCGGGGGCAGGAATATATCAAagt                                                                                                      >  2:1137796/1‑288 (MQ=255)
                                                                                                                                                                                tCCGCTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAggc                                                                                                                                                                           <  2:1938268/219‑1 (MQ=255)
                                                                                                                                                                                   cccaagtgctccgg‑TCCCCTTTGCCCGGTCGCGTGACAATTGGGGTTCCATCCATCTGCCGTCGCGGCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGTTTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGgcg                                                                                                  <  2:817386/276‑1 (MQ=255)
                                                                                                                                                                                    cTCAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGgcgc                                                                                                 >  1:372957/1‑289 (MQ=255)
                                                                                                                                                                                     tcactggggcgg‑TCGCCATGGCCGGGGCGGTTGACAAATTGCGTTCCATGGAGCTGCTGGTGGGTAAGGGCATCGGCCTGCCTGTCGCGGGCATTGCGCCTTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCa                                                                                                <  2:455231/278‑1 (MQ=255)
                                                                                                                                                                                     tCAATGAGCCGG‑TCGCCATTGCCCGGGCGCGTGGCAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATGCGCCGGATTATACCAGCGATGTAATCGACATGGTCGGTGGTGCGCCGGTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCa                                                                                                <  1:437760/289‑1 (MQ=255)
                                                                                                                                                                                      cAATGAGTCGG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCaa                                                                                               <  2:736569/289‑1 (MQ=255)
                                                                                                                                                                                       aatgggtcgg‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAg                                                                                              <  1:2603412/280‑1 (MQ=255)
                                                                                                                                                                                           agtcgg‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGt                                                                                           <  1:817582/283‑1 (MQ=255)
                                                                                                                                                                                             tcgg‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGAc                                                                                                                                                                                                                                                              >  2:891357/4‑123 (MQ=255)
                                                                                                                                                                                                  tCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGATGCGCCGCAGGCGGCGGAAAGCGGGATTGACGCGTGCCGCGGTCTGAACGCGCACATTCGGGTGCAGGAATATACCAACTAGGCCCAAggggtcggt                                                                                      >  2:2627567/1‑281 (MQ=255)
                                                                                                                                                                                                  tCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGtcggcta                                                                                     >  2:533562/1‑282 (MQ=255)
                                                                                                                                                                                                  tCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGata                                                                                     >  1:1456685/1‑288 (MQ=255)
                                                                                                                                                                                                    gCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATcc                                                                                  >  1:1905827/1‑289 (MQ=255)
                                                                                                                                                                                                         tGCCCGGGGGCGTGACAAATTGCGTTCCCTGCAACTGCTGGCGCGTGAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGt                                                                             <  2:711185/289‑1 (MQ=255)
                                                                                                                                                                                                         tGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGt                                                                             <  2:260862/289‑1 (MQ=255)
                                                                                                                                                                                                              gggCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 <  1:961891/200‑1 (MQ=255)
                                                                                                                                                                                                                gcgcGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGCTACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGCTGGTTGAAGGCACGCAGGGCATTGGCGTCGTGCTGGCGGAGACGCGGCAGGCGGCGGAAAGCGTGATTGACGCTTTCGGCGGTCTGAACGCGCATATTCCGGTCCACGAATATAACAAAGAGGCGCCACGGTCCGATATCCGCTGTCGGgttg                                                                      >  2:1517548/1‑289 (MQ=255)
                                                                                                                                                                                                                gcgcGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGcg                                                                                                                                                                                                    <  1:2727494/163‑1 (MQ=255)
                                                                                                                                                                                                                gcgcGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 >  2:569350/1‑198 (MQ=255)
                                                                                                                                                                                                                gcgcGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 <  1:569350/198‑1 (MQ=255)
                                                                                                                                                                                                                  gcgTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGgttgt                                                                     <  1:1137796/288‑1 (MQ=255)
                                                                                                                                                                                                                              gCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTg                                                        >  1:833496/1‑289 (MQ=255)
                                                                                                                                                                                                                                gTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 >  2:1023559/1‑182 (MQ=255)
                                                                                                                                                                                                                                gTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGc                                                                                                                                                                 <  1:1023559/182‑1 (MQ=255)
                                                                                                                                                                                                                                   ggaTGGAACTGCTTGCGCGTCAGGGCATTGACCTGCCGGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGGGGGGCGCCGCTGGTGGTGAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGc                                                   <  2:1279964/287‑1 (MQ=255)
                                                                                                                                                                                                                                      tGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCa                                                                                                                                                                                                               >  1:2498373/1‑130 (MQ=255)
                                                                                                                                                                                                                                              ctgGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTg                                                 <  2:1804949/280‑1 (MQ=255)
                                                                                                                                                                                                                                              ctgGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTg                                                 >  1:1804949/1‑280 (MQ=255)
                                                                                                                                                                                                                                                ggCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAgttggttg                                                                                                                                                                                                                         <  2:345093/110‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gcctgTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACgcgc                                                                                                                                  <  1:926615/176‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gcctgTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACgcgc                                                                                                                                  >  2:926615/1‑176 (MQ=255)
                                                                                                                                                                                                                                                                     gcctgTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAA‑GAGGGCGAttt                 >  1:793459/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         gtaaCGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAA‑GAGGGCGATTTTCGtt            <  1:1982805/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aCGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAA‑GAGGGCGATTTTCGTTCCa         >  1:2634173/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               ggCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAA‑GAGGGCGATTTTCGTTCCAAtt      >  1:485843/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                gCATTGCGCATTCGCCGGCTGATACTAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCCGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTTGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACTCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCGGTCTGGTTGTTGGCGAGGCAGTGGGCGCTGCGTGTGAACGGCGGGCGAAATGAGGG‑GATTTTTGTTACAAgtt     >  2:799497/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                    tGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGgttgt                                                                     >  1:2649377/1‑222 (MQ=255)
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                       
GGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCA‑CTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGG‑CACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGAGCG‑TCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATAGCCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAA‑GAGGGCGATTTTCGTTCCAATTTGCA  >  CP042583/754944‑755504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A