Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F109 I2 R1
|
18 |
64.5 |
2321652 |
91.0% |
2112703 |
142.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
4,049,891 |
IS5 (–) +4 bp |
intergenic (+139/‑5) |
polA → / → spf |
5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
2288919 = | NA (NA) | 89 (1.390) |
61/284 |
0.0 |
100% |
noncoding (1195/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
= 4049894 |
0 (0.000) | intergenic (+142/‑5) |
polA/spf |
5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| * |
? |
NC_000913 |
= 2290113 | NA (NA) | 71 (1.110) |
59/284 |
0.1 |
100% |
noncoding (1/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
4049891 = |
0 (0.000) | intergenic (+139/‑8) |
polA/spf |
5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289060‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAGGCGAATC < NC_000913/4049894‑4049753
TGGGTATAACGCCGTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAAGCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCC < 2:521936/143‑1
TGGGGATCCCGCCTTAAATCGGGAAGAAACGGTCTAAATGGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCC < 2:363817/143‑1
TGGGGATAACGCTTTAGATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCC < 2:1024832/143‑1
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTCTTCGCACCTTCCC > 1:393655/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCC < 1:178525/143‑1
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGAACCTTCCC > 1:279306/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCGGATTCGCACCTTCCC > 1:306881/1‑143
GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCT < 2:92249/143‑1
GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCT > 2:642388/1‑143
GGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTACCT > 2:642344/1‑143
GGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAGCACGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTA > 2:760251/1‑143
GGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCAGAGAAGAA‑TTTCCCCGCTAATTCGCACCTGCCCTA > 2:603039/1‑143
tGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAA < 2:558805/142‑1
ggctagCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAA < 1:911344/137‑1
GGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAACATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGCA‑TTTCCCCGCTTGTTCGCACCTTCCCTAA > 1:237230/1‑143
tATAACGCCTTAAATGGCGAAGAAACAGTCTAAAGAGGCTGATGCAAGCCATTGACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAAC < 1:934475/142‑1
atcACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATGTACGGGAGAAAAAAACGGCTCAAACATGAAGAAATGCAATGACTGAGTCAGCCGCGAACAA‑TTGCCCCGCCTATCCCCACCTTCCCTAcat > 2:219266/4‑140
ATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACT > 2:115224/1‑143
TAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTT < 1:648296/143‑1
TAACGCCTGAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTT < 2:706136/143‑1
CGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTAC < 1:365256/143‑1
CTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCT > 1:643385/1‑143
TTAAATGGCGAAGACACGGTCTAAATAGGCGGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTT < 1:217780/143‑1
AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTT < 1:329883/143‑1
AAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTT > 2:781074/1‑143
AATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTT < 1:761367/143‑1
AATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTT < 1:461349/143‑1
TGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTG < 2:981380/143‑1
GCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAGAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TGTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTT > 2:714446/1‑143
GAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAGAAATCGGCTCAAACATGAAGAAATGAAATGACTGCGTCAGCCGAGCAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAAATTTACTCTTTTTTGTTaa > 1:503613/1‑141
GAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTT > 2:770990/1‑143
GAAACGGTCTAAATAGCCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTT < 1:774657/143‑1
AAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTC < 1:726878/143‑1
AAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTCGCTTAAATTTACGCCTTCTTGTTCAGTTC > 1:1085535/1‑143
TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAG > 1:131318/1‑143
TCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAG > 2:1046483/1‑143
AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTTAGCCGAGAAGAA‑TTTCACCGCTTATTCGCACATTCACTAACTTAACTCTTTTTTGTTCAGTTCCTAAAGGAC > 2:917968/1‑143
TAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTT < 2:1149558/143‑1
GGCTGATTCAAGCCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTT < 1:1000358/143‑1
GCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTT‑CCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTGCGGAAAGCACATTTTtt > 2:111281/1‑141
CTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGT > 2:161186/1‑143
ATTCAAGGCATTTACGGGAGAATAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAAT > 2:767386/1‑143
TTCAAGGCATTTACGGGAGAAAAAATCGGCTAAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATT > 2:1134298/1‑143
TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCGGAAAGGCCTTTTTGTACTTT > 1:190053/1‑143
AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTT > 1:425522/1‑143
AAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTCGTCATTATT > 2:228971/1‑143
GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTATCTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTT < 2:444384/143‑1
GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAGGCACTTTTTCTAATTTTTTTT > 1:232275/1‑143
GCATTTACGGGAGAAAAAAGCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTT < 1:333773/143‑1
TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGT < 2:643385/143‑1
GGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTT < 1:663535/143‑1
GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTG > 1:816909/1‑143
AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCA < 1:950347/143‑1
AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATA < 2:25694/143‑1
ATCGGCTGAAGCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAAT < 2:736694/143‑1
ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAAT < 1:976832/143‑1
CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCTGTTGTTGCATTGGAATTT > 2:226422/1‑143
GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCAGTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGACTTTC > 2:525478/1‑143
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAA < 1:311735/143‑1
CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAAT > 1:916286/1‑143
AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATA < 1:403537/143‑1
AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAG < 2:425522/143‑1
ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGC < 2:663411/143‑1
TGAAGAAATGAAATGACTGCGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCAT < 2:242184/143‑1
TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCAT < 2:379478/143‑1
AAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGT < 1:1062626/143‑1
ATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGA < 1:115224/143‑1
GACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACA < 2:34847/143‑1
CTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGC < 1:1117862/143‑1
GTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTAT < 2:816909/143‑1
AGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTTACTTCTTATGTT > 2:1145254/1‑143
CCGAGAAGAC‑TTTCCCCGCTTCTTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGC < 2:616575/143‑1
AGAAGCA‑TTTCCACGCTTATGCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTCTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTA < 1:460316/143‑1
AA‑TTTCCCCGCTTATTCGTATTTTCTCTAACTTGACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAACTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTAC < 1:309128/143‑1
CCCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAA > 1:763976/1‑143
CCGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTTTAATAGCCATTACAAAACGTTACAGCTTATGTTTCTTACTTACGTAAAAA > 2:387310/1‑143
CGCTTATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAG < 1:266683/143‑1
CTTATCCACACTTTCCTTAACTGTACTCTTTTTTGTTCAGTTCAGAAAGCACGTTGTGTAATGTTTTTTCAGTAGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGC < 2:125423/143‑1
TTAGTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCA < 1:1002191/143‑1
TATTCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCAT > 2:1043529/1‑143
TCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCCCAAAACATGACAACTTATGTTGCTTACTTACGAAAAAAGACATGTT > 1:671744/1‑143
TCGCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAA‑TTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAACAAGGCATGTTC > 1:568735/1‑143
GCACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCA > 2:116003/1‑143
CACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAG < 1:665838/143‑1
CACCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAG < 1:767386/143‑1
CCTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAGGC < 1:497379/143‑1
CTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAGGCt > 2:276452/1‑142
CTTCCCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAGGCG > 1:906193/1‑143
CCTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTGTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAGGCGCATC > 1:597580/1‑143
TGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAA‑TTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289060‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACTTTACTCTTTTTTGTTCAGTTCAGAAAGCACTTTTTGTAATTTTTTTTCAGTTGTTGCATAGGAATTTCTAATAGCCATCACAAAACGTGACAGCTTATGTTGCTTACTTACGAAAAAAGGCATGTTCAGGCGAATC < NC_000913/4049894‑4049753
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
