Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F9 I0 R1
|
165 |
96.4 |
2178490 |
87.4% |
1904000 |
226.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,670 |
T→A |
33.5% |
pseudogene (934/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,670 | 0 | T | A | 33.5%
| 11.7
/ 2.5
| 33 | pseudogene (934/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (9/8); new base A (4/4); total (14/19) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑AAGG‑TTGCGGGA‑ATCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGA > NC_000913/3862435‑3862900
|
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAAAAGCACAGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TTAAAGG‑TTGGGGGA‑Ata > 1:673974/1‑237 (MQ=255)
gCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGAAAATTCCAACGGTTCGGTAAT‑TTCCACCAGCATGGC‑GG‑GT‑TAGG‑TTTCGGGG‑AACAGG‑AAgacgcc > 1:309457/1‑233 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGGGAAATGAACCGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCCCCAGCATGGC‑GG‑GT‑AAGGATTGGGGGA‑AT‑AGC‑AAA‑CCCC‑CCA‑ccctt > 2:240796/1‑235 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGAAAT‑TCCCCCCAACATGGCGGG‑CT‑AAGG‑TTGCGGGA‑AAACCA‑AAC‑CCCG‑CCC‑C‑TTTTA‑ccc > 1:452369/1‑239 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCCAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGAAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GGTTT‑AAGG‑TTCGGGGA‑TACGCC‑AAA‑CCCC‑CCC‑A‑TTTTA‑CCCGAtt > 1:1064030/1‑238 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGGGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑GT‑AAGG‑GTTCGGGG‑ATCAGC‑AAA‑CCCC‑CCC‑CTTTTTA‑CCCGCttt > 1:158819/1‑239 (MQ=255)
cATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGATCGGTAAT‑TCCCACCAGCATGGC‑GG‑GT‑AAGG‑GTGCGGGA‑ATCAGC‑AAG‑CCCG‑CCC‑C‑TTTTA‑CCCGATTTTCCGGTGCgg > 1:874162/1‑239 (MQ=255)
cATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGGGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑TAGG‑TTGCGGGA‑TACCAC‑AAGCCCCC‑CCC‑C‑TTTTT‑CCGCATTTTctgcgcgg > 1:363822/1‑232 (MQ=255)
tGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑AAGG‑TTGCGGGA‑ATCAGC‑AAA‑CCCG‑CCC‑C‑ACTTT‑CCCGCCTTTCCCGTGCGGCAGGGaaagaaaagcc > 1:344111/1‑230 (MQ=255)
aGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑TAAG‑GTGCGGGG‑ATCAAC‑AAA‑ACCG‑CCC‑C‑CCTTT‑TCCGGTTTTTCGGTTGGGGGGGGGAGGACATCGCTAaaaaaaaaccc > 1:431863/1‑234 (MQ=255)
tCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑AAGG‑GTTCGGGA‑ATCAGCAAAA‑CCCC‑CCC‑C‑TTTTA‑‑CCGATTTTTCGGGTCGGCAGTGAAGGACAATGCTAAAGAAAAGcccc > 1:768177/1‑237 (MQ=255)
cAAACAGCCCCCCCCCCATGTTCCCCACAAACCAAAAGGAATAAATTAGGGCAGCAATGGGGGCCGCCAGCGCGGGGTGTACCGAAAACAGCAACGGTAAAAGGAACAGGAAGGTAAATCCCGGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GT‑TT‑AAGG‑TTGCGGGA‑ATCAGC‑AAC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCa < 1:71096/237‑1 (MQ=255)
ccGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGCGGG‑TT‑AAGG‑‑TGCGGGG‑ATCAGC‑AAA‑CCCC‑CCACC‑TTTTA‑CCC‑ATTTTTCGGTGCGGCCGGGAAAGAAATCGCCCAAAAAAAACACACAGCA‑CCcaaaaa > 2:136068/1‑236 (MQ=255)
gtttccccACCACACCAAAGAGATACATGACGGTCGACATGGAGGCCGCCAGCACGGCTTGAACCGAAACCAGCAAGGGTGAAATGAACAGGAAGGTAAATTCCGGCGGTTCGTTAAT‑CCCCCCCAGCATGGC‑GT‑TT‑AAGG‑TGGCGGAA‑AGCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAg < 1:265633/234‑1 (MQ=255)
gTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑AAAG‑GTGGGGGA‑ATACGC‑AAG‑GCCC‑CCC‑C‑TTTTATCCCGA‑TTTCCGGTGCGGCGAGGCAGTGCATCGTCAAAGAAAATGCCACGGCC‑CCCAAAAGTTTTgtgt > 1:543156/1‑239 (MQ=255)
ccccaccaaaaGATATATATTGCGGTGGAGAGTGGGCCCGCCAGCCCGGGGTTTACAGAAAACAAAAAGGGGAAAGGGAAGGGGAAGGAAATGCCCGGGGGTTGGGTAAT‑CCCCACCAGCAGGGG‑GG‑TA‑AAGG‑TTGGGGAA‑ACCAGA‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTg < 2:344111/231‑1 (MQ=255)
tACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑AAAG‑ATGCGGGG‑ATCAGC‑AAA‑CCCC‑CCC‑C‑TTTTT‑CCCCCTTTTTCGGGTGGGGAGTGTAGTAAATTGCTCAAAAAATACCCCCGGCACCCCAAAATTTTTG‑GGTACCCTGCAGGGCAAAACAGc > 1:274777/1‑238 (MQ=255)
tACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGCGGG‑TT‑AAGG‑TTGGGGGA‑A‑CAGC‑CAA‑CCCGCCCA‑C‑TTTTT‑CCCGCTTTTCCGGGGGGCGGGGGAAGACAACCGCCAAAAAAATACCCCCCGC‑‑CCAAAAACTTTTTAGTTATCCCGCAGGGGaaaaaacccccccg > 2:548329/1‑229 (MQ=255)
gggcttccccccAAACAGCAAGGGTAAAAGGAAGGGGAAGGACAATCCCGGCGGTCGGGTACT‑CCCCCCCAGGAGGGT‑GT‑TT‑AGGG‑TTGCGGAA‑AGCGGC‑AAC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGgcgc < 2:549155/228‑1 (MQ=255)
ccGCAAACAGCAAGGGTGAAATGAACGGGAAGTTAAATTCCAGCGTTTCGGTACT‑CCCCCCCAGCATGGC‑GT‑TT‑AAGG‑TGGCGGGA‑ATAAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 1:1065356/239‑1 (MQ=255)
gtaaagaacgaGGATGGT‑AATTCCCGTGGTTTGGTTATCTCCCACCACTTTGGG‑GG‑TT‑GAGT‑GCGGGGCA‑AACAGC‑AGC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgc < 2:497382/228‑1 (MQ=255)
aaaaaTGAACAGGAAGGTAAATTCCGGGGGTTCGGTAAT‑CCCCACCGGCAGGGC‑GG‑TA‑AAGG‑TGGCGGGA‑ACCAGC‑AAC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:104817/237‑1 (MQ=255)
agtGAAGAGGAAGGAAAATTCCAGCGGTTCGGTAAC‑TCCCCCCAGCGTGGG‑GG‑TT‑AAGG‑TTGCGGAA‑ATCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:136068/237‑1 (MQ=255)
aaTGAAAAGGAGGGTCAAGTCTGGTGGTGCGGAAAT‑CCCCCCCGGCGTGG‑‑GG‑TT‑AAGG‑GTGGGGGAGACAAGC‑AAC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 2:263413/239‑1 (MQ=255)
aaTAAACGGGAGGGAAAATCCCAGCGGTCGGGAAAT‑TCCCACCAGCAGGGC‑GG‑TT‑AAGG‑TGGCGGAA‑ATCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 1:334090/239‑1 (MQ=255)
aaggggaaggaaAATCGCGGGGGTTGGGTAAC‑CCCCACCAGGGGGGG‑GG‑TG‑AAGG‑TGGGGGAA‑AACAAC‑ACC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 2:1024350/233‑1 (MQ=255)
aaagagaGGTAAATTCGCGGGGTTCGATAAC‑TCCCTCCAGCAGGGC‑TG‑TT‑AAGG‑TTGCGGAA‑ATCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg < 1:182702/233‑1 (MQ=255)
aCAGGAGGGAAAATCCCGGCGGTTCGGAAAT‑TCCC‑CCAGGATGGCGGG‑TT‑AGGG‑TTGGGGAA‑ACCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg < 1:14295/239‑1 (MQ=255)
aCAGGAGGATAAATCCCAGCGGTCCGAAAAT‑CCCCCCCAGCTGGGC‑GG‑TT‑AAGG‑TGGGGGAA‑ATCAGC‑AAC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg < 1:70075/239‑1 (MQ=255)
aTTCCGGGGTTTGGGAAAT‑CCCCACCCGTAGGGC‑GG‑TA‑AGGG‑TTGCGGGA‑CTCAGA‑ACC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATg < 1:261763/239‑1 (MQ=255)
gcggccgcGGTAAT‑CCCCCCTGGCGTGGC‑GG‑TT‑AAGG‑TTGGGGAA‑AACAGC‑AAC‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCGAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGAGTGCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATgccg < 1:821959/230‑1 (MQ=255)
cgttattccccACCGGCTTGGG‑TG‑TT‑ATGG‑GGGCGGGA‑AACAGC‑AAC‑CCCG‑CCA‑C‑GTTTA‑CCCTATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACa < 1:1010277/231‑1 (MQ=255)
ttt‑AAGG‑TTGGGGAA‑ACCACC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACt < 1:388030/237‑1 (MQ=255)
gtgtggcaTCAGC‑AAC‑CCCG‑CCC‑A‑TTTTT‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAATATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGa < 1:111014/232‑1 (MQ=255)
|
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCATGTTGCCCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAAT‑TCCCACCAGCATGGC‑GG‑TT‑AAGG‑TTGCGGGA‑ATCAGC‑AAG‑CCCG‑CCA‑C‑TTTTA‑CCCGATTTTCCGGTGCGGCAGTGAAGTACATCGCTAAAGAAATGCCCACGGCA‑CCAAAGATTTTTGAGTTACCGTGCAGGGCAAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGA > NC_000913/3862435‑3862900
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
