Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F17 I0 R1
|
72 |
154.6 |
3079696 |
97.7% |
3008862 |
226.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,670 |
T→A |
23.7% |
pseudogene (934/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,670 | 0 | T | A | 23.7%
| 136.7
/ 16.7
| 110 | pseudogene (934/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (41/33); new base A (17/5); total (60/50) |
| Fisher's exact test for biased strand distribution p-value = 8.39e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 111 total aligned reads displayed.
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTG > NC_000913/3862435‑3862907
|
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACCGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTTCCACCAGCATGGC‑GGTT‑CAGTGTGT‑GGGAAACa > 1:139787/1‑238 (MQ=255)
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGTTTG‑GGGAAtaa > 2:1222701/1‑236 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCCTGGC‑GGGT‑ATGAGTTC‑GGGGATCAG‑C‑AAG‑CCCC‑CCCCtttt > 2:78860/1‑239 (MQ=255)
tatCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCAATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGCGGGGAATCGG‑C‑‑AG‑CCCG‑CCCCtttt > 1:19243/1‑239 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGGATCAG‑C‑AAG‑CCCC‑CCCCTTTTAccc > 1:1182139/1‑238 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGGAATTCCCACCAGCATGGC‑GGGT‑AAGGTTTC‑CGGGATAAGAC‑CAG‑CCCC‑CCACtttaccc > 2:47266/1‑234 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGGAACAG‑C‑CAA‑CCCG‑CCCCCTTTAcacca > 2:681248/1‑235 (MQ=255)
tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGCT‑TAGGTTGC‑GGGGAAAAA‑C‑AAA‑ACCC‑CCACtttttaccagat > 2:1244330/1‑231 (MQ=255)
aactccGGGATCCAGTTTGGCGACAAACCTAA‑TTCATACAGCCCCCCGCCTGTGTCGCCCCCCACAC‑AAAAGAAATAC‑ATTAGGGC‑AGATATGGGGGCGGCCA‑GCAGGGCGTGTCCCGAAAACAGCAAGGGTGAAATAAAAAGGAAGGTAAATT‑CCAGCGGTTCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AGGGTTGG‑GGGAATCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTg < 2:1411730/233‑1 (MQ=255)
gggatcgattttGGCGTAAAACCCAGGTCAACCAGCCCCCCCCCCGTGTCGCCCACCCCAC‑CAAAGAGATCA‑ATTACGGC‑GGACATGGAGCCCGCAA‑GCAGGGCGGGCCCCGCAAACAGCAAGGGAGAAAGGAAGGGGAAGGAAAATC‑CCGGCGGTGCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AGGGTGGG‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTg < 2:20879/224‑1 (MQ=255)
gccgcAGATTTGAGATAAAACCTA‑GACAACCAGCCCTCCGCCGTGGTCCCCCACCACTC‑AAAAGACATAC‑ATGACGTG‑AGACATTGAGCCCGCAG‑GCCCTGGTTTTCCCCCAACCAGCAAGGGTGAAGAGAAAGGAAAGGTAATTT‑CCAGCGTTTGGGTAATCCCCACAAGGAGGGC‑GGTA‑AAGGTTGG‑TGAAAACAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTg < 2:1407569/234‑1 (MQ=255)
tCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAG‑C‑AAG‑CCCC‑CCACCTTTACCCCATTTTTCGGAGCGGCAGGGAAg > 1:1011466/1‑239 (MQ=255)
tCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGTTTC‑GGGGATCAG‑C‑AAA‑CCCC‑CCCCCTTTACCCCGTTTTCCCGGGCGGCAGGGaaa > 1:1388320/1‑238 (MQ=255)
cAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGTTGC‑GGGGATCAG‑C‑AAG‑GCCGCCCACTTTT‑CCCGATTTTCCCGTGCGCGTGTGAAgg > 1:594638/1‑237 (MQ=255)
tgttcggCGTTAAAACTGA‑GACACTCCCACCTCCGCCCA‑GTTTCCCCCCCCAC‑CAAA‑AGAGACAATTGCCGTCCGCAATTGAGCCCGCCC‑GCAGCGCGTATCCCCCAAACAGCCGGGGTGAATGGAAGAGGAGGGTAATTT‑CCAGTGTTTCGGTAATCCCCGCCACGATGGC‑GTTT‑AAGGTGGG‑GGAAATCAG‑C‑AGG‑CCCG‑CCTCTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAc < 2:406913/233‑1 (MQ=255)
ttggCGATAAAACCAA‑GCCAATCACCCCCCCGCCCATTTTCCCCACCCCAC‑AAAAGAAATAC‑ATTGCGGC‑CGACATGGAGGCCGCCA‑GCACGGCGGGCCCCGCAAACACCAACGGAAAAATGAAGAGGAAGGTAAATC‑CCAGGGGTTCGGTAATCCCCACCAGCATGGG‑GGTT‑AAGGTGGC‑GGAAATCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTAc < 2:966540/233‑1 (MQ=255)
tGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTTAAAGGTTGC‑GGTAA‑CAGAA‑AAC‑CCCG‑CCCCTTTTCCCCCATTTTCCGGTG‑GGCAGGGAAGTaaaac > 1:221811/1‑233 (MQ=255)
cGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGGATCAA‑C‑AAA‑GCCG‑CCCCTTTTTCCCCATTTTTCGGTGCGGCAGTGAAGCACAACG‑ccg > 2:428166/1‑237 (MQ=255)
gtaaaaaCCTA‑GACAATCAAGCCCCCCCCATTGTCGCCC‑CCACACACAAAGAGATAC‑ATAACGGC‑AGACA‑TGGGGCCCCCACGCCCGGGGTGTCCCACAAACAGCAACGGTAAAATGAACAGGAAGAAAATTC‑CCGGGGGTTCGTTAATCCCCACCGGCGTGGG‑GTTT‑AGGGTGGC‑GGGAACAAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTa < 2:1011466/235‑1 (MQ=255)
aaccctaacaaaTCAGCCCCCCCCCCATGTTGCCCACCACAC‑CAAAGAAATAC‑ATTCCGGT‑CGAAATGGAGCCCGCCA‑GCAGGGCGTTTCCCGCAAACAGCACGGGTGAAATGAACAGGAAGGTAAATT‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGG‑GGTT‑AGGGTGGC‑GGAAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGaa < 2:319263/229‑1 (MQ=255)
caaaccAGCCCTCCGCCCATGTCCCCCACCACAC‑AAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTCCCGCAAACAGCAACGGTAAAAGGAACAGGAAGGTAAATT‑CCAGGGGTTCGGTAATCCCCCCCAGCATGGC‑GGTT‑AAGGTGGC‑GGGAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCAc < 1:580630/234‑1 (MQ=255)
aaTCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑A‑CAA‑CCCG‑CCCCTTTTTCCCGATTTTTCGGCGCGGCCGGGCAGAACATAG‑CTAaaaaaaagaccccc > 1:1031946/1‑230 (MQ=255)
cGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTTC‑GGGAATCAG‑C‑AAG‑CCCC‑CCACTTTTTCCCCCTTTTCCGGTGCGGCAGTGAAGGACATCG‑CTAAAGAAAAA‑CCCCCCGCC‑CCaaaaaat > 2:676895/1‑235 (MQ=255)
cGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGAATCAG‑C‑AAA‑CCCG‑CCACTTTTACCCGCTTTTTCGGGGCGGCAGGGAAGTACATCG‑CCAAAGAAAAA‑CCCACCGCA‑CCAAA‑Gaat > 1:1099632/1‑237 (MQ=255)
aTGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAAACAG‑C‑CAG‑ACCC‑CCCCTTTTTCCCCCTTTTTCGGGGCGGGAGTGGAGGACATCG‑CTCAAAAAAAG‑CCCCCGGCA‑CCCAA‑CAtttttta > 2:108955/1‑237 (MQ=255)
tccccACCACAC‑CAAAGAGAAAC‑ATTCCGGT‑CGACATGGGGGCCGCCG‑GCACGGCGTGTACCACAAACAGCAACGGTAAAATGAACAGGAAGTAAAATC‑CCGGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTT‑AGGGTGGC‑GGGAATCAC‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTa < 2:839499/237‑1 (MQ=255)
tGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAAGTTTC‑GGGGATCAG‑C‑CAG‑CCCG‑CCACTTTTTCCCCATTTTTCGGGGCGGCAGGGAAAGACATCG‑CTTAAGAAAAA‑CCCCCCGCA‑CCCAA‑AAtttttttgtt > 1:45754/1‑233 (MQ=255)
gcccccccACAC‑AAAAGATAACA‑ATTCGGGC‑CGACATTGAGACCCCAG‑GGCCGGCGTGACCCGCAACAAGCAGGGGGGAAAGAAAAAGGAAGGAAAATC‑CCGGCGGTTCGTAAATCCCCACCAGCAGGGG‑GGTT‑AGGGTGGC‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTa < 2:311320/237‑1 (MQ=255)
gCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGCGGGTA‑AAGGTTGG‑GGGATTAGC‑C‑AAC‑CCCC‑CCCCTTTTACCCG‑TTTTCCCGGGCGGCAGTGGAGTAAAAAG‑CTAAAAAAAAA‑GCCACCGCC‑CCCAA‑GCATTTTGTG‑TTa > 2:796395/1‑238 (MQ=255)
accacac‑aaAAGAGAAAC‑ATTACGGG‑CGAAATGGAGGCCCCCA‑GCACGGCGTGTACCGAAAACAGAAAGGGTGAAATGAACAGAAAGGAAAATT‑CCAGCGGTTCGGTAATCCCCACCAGCATGGC‑GGTT‑AGGGTTGG‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑g < 1:218902/239‑1 (MQ=255)
accacac‑aaAAAACATAA‑TATACGGC‑CGACAGTGGGCACGCCA‑GCCGGGCGTGTCCCGAAAACACCAGGGGTAAAAAAAACAGGAGGGTAAATC‑CCAGGGTTTCGATATTCCCCCCGACCAGGGC‑GTTA‑AAGTTTGG‑GGAAACCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑g < 2:936560/239‑1 (MQ=255)
acac‑caAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑CGGGAACAA‑C‑AAA‑CCCC‑CCCCTTTTTCCCCCTTTTCCGGTGCGGCCGTGGAGGACAACG‑CCAAAGAAAAA‑CCCACCGCC‑CCCAA‑GATTTTTGAG‑TTAC‑CGG‑GCAg > 1:685499/1‑239 (MQ=255)
aaGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAAACAG‑C‑AAG‑CCCG‑CCCCTTTTTCCCCATTTTCCGGGGCGGCAGGGAAGAACATCC‑CTAAAAAAAAA‑CCCACGGCA‑CCCAA‑AATTTTTTAG‑TTAC‑CGT‑GCAGGGC‑aaa > 1:187868/1‑239 (MQ=255)
agaTAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑C‑AAA‑CCCC‑CCCCCTTTACCCCGTTTTTCCGTGCGGGCGTGAAGTACATCG‑CTCAAGAAAAG‑CCCCCCGCA‑CCCAA‑AAATTTTTAG‑TTTC‑CCT‑GCAGGGC‑AAAAc > 2:223603/1‑238 (MQ=255)
agaTAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGGAAAAG‑A‑AAA‑CCCC‑CCCCTCTTATCCCATTTTTCCGGGCGGGAGTGAAGGACATCG‑CCAAAAAAAAG‑CCCACGGCA‑CCAAACAATTTTTTGG‑TAAC‑CG‑‑ACAGGGC‑aaaaa > 2:238699/1‑237 (MQ=255)
tAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAAGTTGC‑GGGGATCAG‑C‑AAA‑CCCC‑CCACTTTTTCCCGCTTTTTCGGTGGGGCAGTGAAGGAAATAG‑CCAAAAAAAttgc > 1:277370/1‑191 (MQ=255)
tAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGG‑GGGGAACAG‑C‑CAA‑CCCG‑CCCCCTTTTCCCGATTTTTCGGGGCGGCAGGGGAGTACAACG‑CTCAAGAAAAG‑CCCACGGGA‑CCCAA‑GATTTTTTGG‑TTTA‑CGT‑GCAGGGC‑AAAAACG‑c > 1:1311788/1‑238 (MQ=255)
c‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑TAGGTTTC‑GGGGATCCG‑C‑AAA‑CCCC‑CCCCCTTTTCCCCACTTTCCCGTGCGGGCGGGGAGGACATTGCCTAAAAAAATG‑CCC‑CCGCA‑CCCAA‑AAATTTTTAG‑TTAT‑CGT‑GCCGGGC‑AAAAACG‑ccc > 2:975121/1‑237 (MQ=255)
c‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGG‑GGGGAACAG‑C‑AAA‑CCCG‑CCACCTTTATCCCATTTTTCGGGGGGGCAGGGAAGGAACACG‑CTAAAGAAAAG‑ACCACGGGACCCAAA‑AATTTTTGGT‑TTAC‑C‑T‑GCAGGGG‑aaaaaccccc > 2:1110934/1‑232 (MQ=255)
gT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑C‑AAG‑CCCG‑CCCCTTTTAACCGATTTTTCGGTGCGGCAGTGGAGTAAAACG‑CTAAAGAAAAG‑CCCACCGCA‑CCAAA‑GATTTTTTAG‑TTAC‑CGT‑GCCGGGC‑AAAACCA‑CCTTCCgggga > 1:284853/1‑237 (MQ=255)
t‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGGTGG‑GGGGATCAA‑C‑AAA‑CCCC‑CCCCTTTTTTCCGCTTTTTCCGTGGGGCAGGGGAGAAAAACG‑CTAAAAAAAAA‑CCCCCGGCA‑CCAAA‑AATTTTTTAGTTTAC‑GGG‑CCAGGGA‑AAAACCG‑CCTTCCGGGac > 2:940523/1‑238 (MQ=255)
gACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGGTGC‑GGGAAACAA‑G‑CAG‑CCCC‑CCCCTTTTTCCCCCTTTTTCCGTGTGGGAGCGAAGTACATCGCCCAAAAAAATC‑CCCCCGCCC‑CCAAA‑ACTTTTTG‑G‑GTAC‑CCT‑CGAGGGC‑AACACCC‑CCTTccccggaca > 2:776649/1‑231 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGG‑GGGAATCAA‑CAAAC‑CCCC‑CCCCTTTTCCCCCTTTTTCCGG‑GGGGCCGGGGAGAAAAAAC‑CTAAACAAAAGCCCCCCGCCC‑CCAAA‑AATTTTTTA‑‑TTAA‑CGT‑GCAGGGG‑AAAAACA‑CCCTCCGGGgacaac > 2:1197959/1‑239 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGGAACAA‑C‑AAA‑CCCC‑CCCCCTTTTCCCCATTTTTCCGTGCGGGAGGGAAGGACAACC‑CTTAAAAAAAG‑CCCCCGGCC‑CCCAA‑GATTTTTTAG‑TTTA‑CCT‑GCAGGGC‑AAAACCGCCCTTCCGGGacaa > 2:1527838/1‑235 (MQ=255)
aCATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAAGGTTC‑GGGAATCAA‑C‑AAA‑CCCC‑CCCCTTTTTCCCCATTTTTCGGGGCGGCAGGGAAGGTAATCG‑CCAAAAAAAAG‑CCCCCCGCC‑CCCAA‑AACTTTTTAG‑TTTCACGT‑‑CCGGGC‑AAAACAG‑CCCTCCcgggcaacc > 2:11886/1‑233 (MQ=255)
gccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAAGTTGG‑GGGAAACAG‑C‑AAG‑CCCC‑CCACCTTTTCCCGATTTTTCCGTGCGGCAGTGAAGTACATCG‑CTAAAAAAATG‑CCCACGGCA‑CCAAA‑AATTTTTTAG‑GTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCCGGGACAAAGATTTTAGCg > 1:933322/1‑238 (MQ=255)
gccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGGT‑AAGGGTTG‑GGGGATCAA‑C‑AAA‑CCCGCCCCCTTTTACCCG‑TTTTTCGGGGCGGGCGGGAAGGACATCG‑CTAAAAAAAAA‑CCCCCCGCACCCAAA‑AATTTTTTAG‑‑TAC‑CGTGGCGGGGA‑AAAACCC‑CCTCCCGGG‑ACAAACAGTTCAGCgg > 2:450989/1‑239 (MQ=255)
ccA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGAACAG‑C‑AAGCCCCC‑CCCCTTTTACCCCTTTTTCC‑GTGCTGGCGTGACGTACAACG‑CTCAAGAAAAA‑CCCACCGCC‑CCCAA‑GAATTTTTAG‑TTAC‑CCC‑GCCGGGG‑CAAACCG‑CCCTCCGGGACCCACCAGTTCAACgc > 2:1101289/1‑237 (MQ=255)
gcgtggtACCGAAAACAGCACCGGTAAAATGACAAGGAAGGTAAAGT‑CCGGCTGTGCGGGATCCCCCCCCAGCAGGGG‑GTTT‑AAGGTCGC‑GGAAATCAC‑C‑ACG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑Ggcgc < 2:6254/234‑1 (MQ=255)
ctACAGCAAAAAGCAAGGGGAAAAAGACCAGGAA‑GTAAATTCCCAGGGGTGCGGTAATCCCCCCCAGCAGGGG‑GGTT‑AAGGTTGG‑GGGAATCAA‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑aaa < 2:678880/238‑1 (MQ=255)
ccGAAAACAGCAAGGGGAAAATGAACAGGAAGTTAATTC‑CCGGCGTTTGGGTAATCCCCCCCAGCTGGGC‑GGTT‑AAGGTTGG‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑Tg < 1:1110934/239‑1 (MQ=255)
acAAACAGCAACGGTAAAATGAAAAGGAAGAAAATTT‑CCGGCGGTTCGTTATTCCCCACCAGCATGGC‑GTTT‑AGGGTGGG‑GGAAACAAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGaa < 2:45754/238‑1 (MQ=255)
cAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑CGGAATCAG‑C‑AAA‑CCCG‑CCACCTTTACCCGATTTTTCGGTGCGGCAGGGGAGGACAACG‑CTAAAGAAATA‑CCCACCGGA‑CCAAA‑GATTTTTTAG‑TTAA‑CCG‑GCAGGGC‑AAAACCC‑CCTTTCCGGGACAACGATTTCAGCGGCGC‑GGCGCC‑C‑CAAA‑TGa > 2:807057/1‑237 (MQ=255)
cAAACAGCAACGGTGAAATGAACAGAAAGGAAAATT‑CCGGCGGTTGGGTAATCCCCCCCAGCTTGGC‑GTTT‑ATGTTTGC‑GGGAATAAG‑C‑AGG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGaa < 1:21538/238‑1 (MQ=255)
aCGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGCT‑TAGGGTGC‑GGGAAGAAG‑C‑AAG‑ACCC‑CCACTTTTACCCGAGTTTTCGGCGCGGCAATGAAGTACAACG‑CTAAAGAAAAA‑CCCACCGCA‑CCCAA‑AATTTTTTGG‑TTAC‑AGT‑GCGAGGC‑AAAACCG‑CCCTCCGGGAAAAAAGAATTCAGGGGCGC‑CGCGGC‑C‑AAAA‑AGAACTCATCCAGa > 2:1342169/1‑239 (MQ=255)
gtaaaaGGAACAGGAGGTTAAATT‑CCGGGGGTTGGGTAACCCCCACCAGCAGGGC‑GGTA‑AAGGTGGG‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtg < 1:450989/235‑1 (MQ=255)
gAAAAGAACAGAAAGGAAAATT‑CCAGCGTTTCGGGAATCCCCACCAGCATGGG‑GGTG‑AAGGTTGC‑GGGAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:256177/238‑1 (MQ=255)
aaaaaGAACGGGAAGATAAATT‑CCAGGGGTAGGGTAACCCCCCCCCGTCGGGC‑GGTA‑AGGGTTGC‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:431300/237‑1 (MQ=255)
aaaaaGAACAGGAAGGAAAATC‑CCGGCGGTCCGGAAATCCCCCCCAGCAGGGC‑GGTT‑AGGGTGGC‑GGGAATCAG‑A‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:776649/237‑1 (MQ=255)
aaaaTGAAGAGGAAGTAAAATC‑CCGGCGGTTCGATAATCCCCACCCGCAGGGC‑GGTT‑AGGTGTGC‑GAAAACCAA‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 2:1099632/237‑1 (MQ=255)
aaaaTGAAAAGGAGGGAAAATT‑CCAGCGTTCCGGTAATTCCCCCCAGCATGGG‑GGTT‑AAGGTGGG‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGAtgct < 1:739550/237‑1 (MQ=255)
aaaTGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGGATCAG‑C‑AAG‑CCCG‑CCACTTTTTCCCGATTTTTCGGTGCGGCAGGGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTTAG‑TTTC‑CGT‑GCAGGGC‑AAAAACG‑CCTTCCGGGAACAACGATTTCAACGGCTC‑GGCGCT‑C‑AAAC‑TGAAACCTTGCCGAttcttc > 1:718112/1‑237 (MQ=255)
aaagaacgagAAGGAAAATT‑CCGGCGTTTCGTTACTCCCCCCCAGCAGGGC‑GGTG‑AGGGTTGG‑GAGAATCAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTgcg < 2:170924/230‑1 (MQ=255)
tcaaCAGGAAGATAAATC‑CCAGCGTTTCGGTATTCCCCCCCAGCATGGC‑GTTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 1:537702/237‑1 (MQ=255)
agAACAGGAAGATAAATC‑CCAGCGGTTCGATAATCCCCACCAGCAGGGC‑GGTA‑AAGGTTGC‑GGGAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 1:1101289/238‑1 (MQ=255)
aaCAGAAAGATAAATT‑CCGGCTGTTCGCTAACCCCCACCGGAATGGC‑GGTT‑AGGGGGGC‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGcc < 2:277810/237‑1 (MQ=255)
ccAGGAAGATAAATT‑CCGGCGTTTCGGTAACTCCCACCAGCATGCC‑GGTT‑AAGGTTGC‑GGAAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAg < 1:1244330/238‑1 (MQ=255)
ggaaggaaAATC‑CCAGCGGTTCGGTAATCCCCACCAGCAGGGC‑GGTT‑AAGGTTGC‑GGAAATCAG‑C‑AGG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa < 1:1289683/238‑1 (MQ=255)
gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTTC‑GGGAAACAG‑C‑AAA‑ACCC‑CCCCCTTTAACCGATTTTTCGGTGCGGCCGTGGAAGAAACCG‑CTAAAGAAATG‑ACCCCCGCA‑CCAAA‑AATTTTTTTG‑GTTA‑CGT‑GCAGGGCAAAAACGG‑CCTTCCGGG‑ACAACGATTTTAGCGGCTC‑GGCGCTCC‑AAAC‑T‑TACTCTTGTAGGTGTTGCGCCCACTAc > 2:636690/1‑238 (MQ=255)
gAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGGTGC‑GGGAAACAG‑C‑AAG‑CCCG‑CCACTTTTTACCGCTTTTTCGGGGCGGGAGTGAAGGACATCG‑CTAAAGAAATG‑CCCCCGGCC‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAAACG‑CCTTCCGGGAACAACGATTTTAACGGCCCGGGCGC‑‑C‑AAACATAAACTCTTGCAGATGC‑GCGccccacaca > 2:385709/1‑233 (MQ=255)
aaaTTCCCAGCGGTTCGTTAATCCCCACCAGCAGGGG‑GTTT‑AAGTGTGG‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTg < 1:133444/238‑1 (MQ=255)
ccaggCGGTGCGTTAACTCCCACCAGACTGGG‑GGTG‑TGGGGTGC‑GGAAATCAG‑C‑ACC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATgcc < 2:1308200/235‑1 (MQ=255)
atccccACCAGTAGGGG‑GTTT‑AAGGTTGC‑GTGAAACAG‑C‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGc < 2:718112/236‑1 (MQ=255)
ccccggaaTGGC‑GGTT‑AAGGTTGC‑GGAAATCAA‑G‑AAC‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:509510/232‑1 (MQ=255)
ccccaGCTGGGT‑GGTT‑AGGGTGGG‑GGGAGTCAC‑G‑AGG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:595803/237‑1 (MQ=255)
ccccaGCATGGG‑GGTA‑AAGGTGGG‑GGGAATAAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:1527838/237‑1 (MQ=255)
cccacgCAGGGG‑GGTT‑AGGGTGGC‑GAGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACAGCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTGCAACAGCTGCCGGAc < 1:780694/234‑1 (MQ=255)
caccaGCATGGC‑GGTT‑AAGGGTGC‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:796395/239‑1 (MQ=255)
accaGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTTCCCGATTTTCCGGTGCGGGGGTGAAGTACATCG‑CTAAAGAAAAA‑CCCACGGCA‑CCAAA‑GGTTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTTAGCGGCTC‑GGCGGT‑C‑AAAC‑TGAACTCTTGCAGGAGCCGGCCCCCATACATCTGCATGCCCGCTTCAACAGCttgcgggc > 2:1175704/1‑231 (MQ=255)
accaGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCC‑CCCCCTTTTCCCCATTTTTCCGGGCGGCAGTGAAGGACATCG‑CCAAAAAAATG‑CCCACGGCC‑CCAAA‑GATTTTTTAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCCGGAACAACGATTTTAGCGGCCC‑CGCGCC‑CAAAAC‑TAAACCCTTCCAG‑TGCTGCGCCCCGGAAATCTTAAATCCGCCCTCCACCACCGCCGGag > 2:483610/1‑237 (MQ=255)
caggcgtGGC‑GGTT‑AAGGGTGG‑GGAACACAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa < 2:130044/233‑1 (MQ=255)
ccggcgggggggTT‑AGGGTGGC‑GGGAATCAG‑C‑ACG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCa < 2:1182139/229‑1 (MQ=255)
caGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTTCGGGGCGGCAGGGGAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTa > 1:1320555/1‑204 (MQ=255)
tggggggTT‑AAGGTTGC‑GGGAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGAt < 1:78860/234‑1 (MQ=255)
tGGC‑GGTT‑AAGGGTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCCCTTTTTCCCGCTTTTTCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCCCGGCC‑CCCAA‑GATTTTTTAG‑TTAC‑CGT‑GCAGGGC‑AAAAACG‑CCCTCCGGGAACAACGATTTCAGCGGCTC‑GGGGCC‑C‑CAAC‑TGAACCCTTTCAGAATCTGCCCCCCGTACACCTGAGTTGCCCCCTCCACCGCTGCCGGACCCAAAATa > 2:621512/1‑239 (MQ=255)
c‑GGTT‑AGGGTGGG‑GGAAAACAA‑A‑AAG‑CCCG‑CCACGTTGACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 1:669938/238‑1 (MQ=255)
gggTT‑AAGGTAGC‑GAG‑ATCCG‑C‑AAGACCCG‑CCACTTTTTCCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCCCGTCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 2:1427250/237‑1 (MQ=255)
ggtgggggAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGt < 1:778816/233‑1 (MQ=255)
ggggggAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGa < 1:848008/236‑1 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTg > 1:1184428/1‑93 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATg > 1:1186452/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATg > 1:940875/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATg > 1:1510172/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATg > 1:1488177/1‑239 (MQ=255)
c‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATg > 1:1378478/1‑239 (MQ=255)
c‑GGAAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTg < 2:1184428/93‑1 (MQ=255)
gggAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGa > 1:266994/1‑239 (MQ=255)
gAACCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa < 1:483610/238‑1 (MQ=255)
aTCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGCTGCTGCGCCCAGTACATCTGAATGACGCCTTCAACAGCTGCCGGACCAAAGATACACTGTCCGACGATGAAgtg > 2:756220/1‑239 (MQ=255)
aTCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACACAAGATAAACTGTCCGTAGCAGAAgtg > 2:788930/1‑239 (MQ=255)
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ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTA‑GTCAATCAGACCTCCGCCCATGTTGCCCACCACAC‑CAAAGAGATAC‑ATTACGGT‑CGACATTGAGGCCGCCA‑GCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATT‑CCAGCGGTTCGGTAATTCCCACCAGCATGGC‑GGTT‑AAGGTTGC‑GGGAATCAG‑C‑AAG‑CCCG‑CCACTTTTACCCGATTTTCCGGTGCGGCAGTGAAGTACATCG‑CTAAAGAAATG‑CCCACGGCA‑CCAAA‑GATTTTTGAG‑TTAC‑CGT‑GCAGGGC‑AAAACCG‑CCTTCCGGGAACAACGATTTCAGCGGCTC‑GGCGCT‑C‑AAAC‑TGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAAGTG > NC_000913/3862435‑3862907
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
