Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I0 R1
|
87 |
172.1 |
3477528 |
97.2% |
3380157 |
226.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,862,670 |
T→A |
24.9% |
pseudogene (934/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,862,670 | 0 | T | A | 24.9%
| 80.2
/ 12.6
| 80 | pseudogene (934/1617 nt) | glvC | pseudogene, arbutin specific enzyme IIC component of PTS;enzyme; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system, arbutin‑like IIB component; PTS system, arbutin‑like IIC component |
| Reads supporting (aligned to +/- strand): ref base T (21/28); new base A (12/4); total (36/44) |
| Fisher's exact test for biased strand distribution p-value = 4.24e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 |
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAA > NC_000913/3862435‑3862904
|
aTTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTTA‑GG‑GTGCGGGGATCa > 1:1540977/1‑238 (MQ=255)
tttGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATCAG‑c < 1:1343425/239‑1 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAAGGG‑TTGGGGGAA‑CAG‑C‑AAG‑GCCGCCC‑CTTTTA‑ccc > 1:1062081/1‑238 (MQ=255)
gcgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑GTTA‑AG‑TTTCTGGAATCAG‑C‑AAA‑CCCCCCC‑CTTTTT‑ccc > 1:203975/1‑238 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑GTTA‑AG‑TTGTGGGGATCAA‑C‑AAGCCCCCCCC‑CTTTTA‑cc > 2:992510/1‑237 (MQ=255)
cgTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑ATAA‑GG‑GTGGGGGAAACAC‑C‑AAGCCCCGCCC‑TTTTTA‑ccga > 1:880466/1‑237 (MQ=255)
tGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTTA‑GG‑TTGCGGGAATCAG‑C‑AAG‑CCCGCCC‑CTTTTT‑CCCCAtt > 1:964818/1‑239 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GGTTTGCGGG‑ATTAA‑C‑AAG‑CCCCCCC‑CCTTTT‑ACCGGtttt > 1:1355815/1‑239 (MQ=255)
gTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGATCAG‑G‑AAA‑CCCGCCACCTTTTC‑CCCGAttt > 1:511002/1‑239 (MQ=255)
ttGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTTCGGGAATCCG‑C‑AAA‑CCCCCCA‑CCTTTT‑ACCGGtttt > 1:43569/1‑238 (MQ=255)
caccacgggtaccATTTTTGGGGAAAAACCGAATCAAACCGGCCCCCCCCCATTGTACCCCACCACCCCAAAGAAATAAATT‑CGGGCGAACTTTGGGCCCGCCACCACGGGGTGCACCGC‑AAACACCAGCGGAGAAATGAAAAGGAAGGAAAATCCCAGGGGTTGGTTATTCCCCCCCGGTAGGGCGG‑TTAG‑GG‑TGGCGGGATTCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTg < 2:230037/228‑1 (MQ=255)
caccggaggccATTTTGGCAGAAAAACCTACCAAAGCAGCCCCCCGCCCA‑TGTCCCCCCCCCACCCAAAGGGATACTTTACGGTAG‑ACGTGGAGGCCGCCGGCACGTGGT‑TTCCGCAAAACAGCACGGGTGAAATAACCGGGAGGGAAATTTCCAGCGGTTGGGTACTCCCCACCATCATGGCGG‑TTAG‑GG‑TGGCGGGAATCAA‑A‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCgg < 2:713343/230‑1 (MQ=255)
cGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTTA‑GG‑ATGGGGGGAACAG‑C‑AAA‑CCCCCCC‑CTTTTT‑CCCCCTTTTCCgtggtggcgg > 1:1107280/1‑230 (MQ=255)
cGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAATCAG‑C‑AAA‑CCCCCCC‑CTTTTA‑CCCGATTTTCTGGTGCGG‑ccg > 1:463308/1‑237 (MQ=255)
ttGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGATCAA‑C‑CAG‑ACCGCCA‑CTTTTA‑CCCCCTTTTTCGGGGGGG‑CAGGGGAGTACaac > 2:840986/1‑236 (MQ=255)
cGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAATCAG‑C‑AAG‑CCCGCCC‑CCTTTA‑CCCCCTTTTTCGGGGCGG‑CAGTGAAGTACACCGCtc > 1:1501010/1‑238 (MQ=255)
cAACCAGCCCCCCCCCCT‑TGTCCCCCCCCACCACAAAGAAAATCATTGCGGCCG‑AAATTGGGGCCGCAAGCACGGGGGTTCCCGA‑AAACAGCAACGGGGAAATGAACAGGAGGATAAATCCCGGGGGTTCGTTAATCCCCCCCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCa < 2:799732/237‑1 (MQ=255)
cgtgtcccccACCCCCCAAAAAAGAAACATCGCGGCGG‑ATATGGGGGCCGCCAGCACGGGTTGTACCGA‑AAACAGAAGGGGGGAAATGAACAGGAAGGAAATTTCCAGCGGTTCGGTAATCCCCCCCAGCAGGGGGG‑TTAG‑GG‑TTGGGGGAACAAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCGCGG‑CA‑CCAAAGATTTTTg < 2:1318120/232‑1 (MQ=255)
aagttagccacccacaccaAAGAAATAATTTAGGTTGG‑AAATGGAGGCCGCAAGCCGGGGGGAAACCAC‑AAACTGCAATGGAAAAGTGAACGGGAAGAAAAATCCCATCGGTACGGTAATCCCCACCTGAAGGTCGT‑TTAA‑GG‑GTGGGGGAAGAAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTg < 2:396549/228‑1 (MQ=255)
a‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑GTAA‑AG‑GTGGGGGGAAGAA‑C‑AAA‑CCCGCCC‑CATTTA‑CCCCATTTTTCCGTGCGG‑CCGGGAAGGACATCCCTTAAAAAA‑TGCACCAGG‑GA‑CCCAAGAATTTTGa > 2:367250/1‑239 (MQ=255)
ggCCCCCCACCCAAAAGAGAGATATTAGGTTAG‑AATGGGAGGCCGCAAGCACGGGTGGCCCCGA‑AAACAGAAGGGAGGAAAGGAAAAGGAAGGAAAAGTCGGGCGGTGCGGAAATCCCCACAATCAGGGGGT‑TTAA‑GG‑TGGGGGGAATCAA‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTa < 2:921844/238‑1 (MQ=255)
gCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGATCAG‑C‑AAG‑CCCGCCC‑CTTTTT‑CCCGCTTTTTCCGTGCGG‑CAGGGAAGTACATCGCTAAAGAAA‑AGCCCCCGG‑GA‑CCAAAGAATTTTTAGTTa > 1:1318120/1‑238 (MQ=255)
cacaccaAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTTCGGGGATCAG‑C‑GAA‑CCCCCCA‑CTTTTA‑CCCCCTTTTTCCGTGCGG‑CCGTGGAGTAAAACGCCAAAAAAA‑ATCCCACCG‑CC‑CCCAAAATTTTTTAGtttacggtca > 2:1421619/1‑231 (MQ=255)
agaTACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTTA‑AG‑GTGCGGGAAACAC‑C‑CAG‑CCCGCCA‑CTTTTA‑CCCCCTTTTTCGGTGCGG‑CCGTGCAGGACAACGCTCAAGAAA‑ACACCACAG‑CG‑CCCAAACTTTTTGTGGTA‑CCG‑T‑GCAGGGC‑caaaa > 2:310832/1‑237 (MQ=255)
aTACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAAGGG‑TGGGGGGAACCGC‑C‑AAC‑CCCCCCC‑CTTTTA‑CCCGTTTTTCCGG‑GCGG‑CCGGGGAGGAAAATGCCTAAAAAA‑AGCCCCCCG‑CACCCAAGGATTTTTTGGTTA‑CCG‑T‑CAAGGGA‑AAAAcc > 2:1653528/1‑238 (MQ=255)
aTACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑GTAA‑GG‑GTTTGGGGAACAG‑CAAAA‑CCCCCCC‑CTTTTC‑ACCCTTTTTCGGGTGCGG‑‑AGGGGAATACACACCTAAAAAAACTCCCCCCGG‑CC‑CCAAAAATTTTTAGGTTA‑CAG‑G‑GC‑GGGC‑AAAAcca > 2:1582724/1‑237 (MQ=255)
aTACAGTACGGCGG‑AAATGGGGCCCCCCGGCCCGGGGTTCACCGC‑AAACAGAAACGGTAAAATGAACGGGAGGGTAATTTCCAGCGGTTGGGTACTCCCCCCCAGCAGGGGGG‑TAAG‑GT‑TTGCGGGAATAAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGc < 2:1062081/239‑1 (MQ=255)
tACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTTA‑GG‑GTGCGGGAGACAG‑C‑AAA‑CCCCCCA‑CATTTA‑CCCCCTTTTTCGGTGCGG‑CCGTGAAAAACATCGCCAAAGAAA‑ACCCCACGG‑CC‑CCAAAAAATTTTTAGTTA‑ACG‑C‑GCAGGGG‑AAAAACGc > 2:1447400/1‑238 (MQ=255)
aCGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGATCAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCGATTTTTCGGTGCGG‑CAGGGGAGGACATCGCTAAAGAAA‑AGCCCCCGG‑CA‑CCCAAGATTTTTTAGTTA‑CCG‑A‑GCAGGGC‑AAAACCGCCTTCCgg > 1:885356/1‑239 (MQ=255)
cGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAAATAG‑C‑AAA‑CCCCCCC‑CTTTTT‑ACCCATTTTTCGGTGGGG‑CCGGGAAGTACATCGCTAAAAAAA‑CGCCCACGG‑CA‑CCAAAAAATTTTTTGTTA‑ACG‑T‑GCAGGGG‑CAAAACGCCCTCCcgg > 1:795031/1‑239 (MQ=255)
cGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑ATGTCGGACTTCG‑C‑AAA‑ACCCCCA‑CCTTTA‑TCCCCTTTTCCCGGGCCG‑GCGGGAAGGACCTCTCTAAAACAA‑CTACCCCCG‑CC‑CCCCACATTTTTGAGTTA‑CCT‑TCACAGACC‑AAAACACCCTTCCgg > 2:1103265/1‑239 (MQ=255)
gTCG‑ACATTGGGGCCGCCAGCCCGGGGTGTACCGC‑AAACAGAAAGGGGAAAATGAACGGGAAGTAAAATTCGAGCGTTTGGTTAATTCCCCCCAGCTGGGCGG‑TTAA‑GG‑TTGCGGAAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGa < 1:1192526/238‑1 (MQ=255)
gTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑AG‑GTTCGGGGAACAG‑C‑AAA‑CCCGCCA‑CTTTTATCCCAATTTTCC‑GTGCGG‑CGGGGAAGTAACTCGCTAAAGAAA‑TGACCACCG‑CC‑CCAAAAAATTTTTAGGTA‑ACC‑G‑GCAGGGC‑AAAAACGCCCTCCgggga > 1:823724/1‑237 (MQ=255)
gTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑GTTA‑GG‑GTGCGGGAAACAG‑C‑CAG‑CCCCCCC‑CTTTTA‑CCCCGTTTTCCGGGGCGC‑AGGTGAAAGAAATCGCCAAAAAAA‑AGCCCAAGGACC‑CAAAAAATTTTTAGGTTC‑CTG‑T‑GC‑GGGC‑AAAACCACCATCCgggg > 2:269688/1‑237 (MQ=255)
g‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑ATAA‑AG‑GTTCAGGAAATAG‑C‑AAA‑CCCGCCA‑CCTTTACCCCGGTTTACCGGGGCGG‑‑AGGGGAGTAAAACGCCCAAGAAA‑TTGCCAACG‑CA‑CCAAAAAATTTTTGGTTT‑CCGTT‑CCGGGGA‑AAAACAGCCTTCCGGGacca > 2:1666384/1‑239 (MQ=255)
aCATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTTAA‑GG‑TTGGGGGAA‑CAA‑C‑AAGCCCCCCCC‑CTTTTA‑CCCCTTTTTCC‑GTGCGGCCGGGGAAGGAAACCCCCAAAAAAA‑T‑CCCACCG‑CC‑CCCAACAATTTTTAGATACCCC‑T‑GCAGGAA‑AAAACC‑CCCTCCGCGaacaaa > 2:557922/1‑238 (MQ=255)
ccgccAGCACGGCGTGTACCGA‑AAACAGCAACGGTGAAAGGAACAGGAAGGAAAATCCCAGCGGTTGGGTAATCCCCACCAGAAGGGCGG‑TTAA‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAg < 1:1447400/238‑1 (MQ=255)
gccAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTTAA‑GG‑TT‑CGGGAATCAG‑C‑AAA‑CCCGCCC‑CCTTTT‑CCCGCTTTTCCCGGGCCG‑CCGGGGAGTAAATCCCTAAAAAAA‑AGCCCACCG‑CC‑CCCAAGATTTTTTAGTTA‑CCC‑C‑GCAGGGCAAAAACCCCCTCCCGGGAAAAACGttttacccg > 2:1700777/1‑234 (MQ=255)
gccAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑AG‑TTGCGGGAAACAG‑C‑AAA‑CCCCCCC‑CTTTTA‑CCCGATTTTCCCGGGCGG‑CAGTGAAATACATCTCTAAAGAAA‑AACCCACAG‑CC‑CCCAAAATTTTTTAGGTA‑ACG‑T‑GCAGGGG‑AAAACCCCCCTCCCGGAAAAAAGATTTccacg > 1:540976/1‑234 (MQ=255)
gccAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑GTTA‑GG‑TTTCGGGGATCAGCC‑AAC‑CCCCCCC‑CTTTTC‑CCCG‑TTTTTCGGTGCGG‑GCGTGGAGTACAACGCTTAAAAAA‑AACCCCCCG‑CC‑CCCAAGATTTTTTATGTA‑CCG‑C‑GGCGGGC‑AAAAACCCCCTCCCGGGACAAAGATTTCCGccg > 2:223953/1‑237 (MQ=255)
ctggCGGGCACGGC‑AAACGACAACGGTGAAATGAACAGGAAGGAAAATCCGAGCGGTTCGGAAATTCCCACCAGTAGGGCGG‑TTAG‑GG‑TTGGGGAAATCAC‑C‑AAG‑TCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCgg < 2:503984/236‑1 (MQ=255)
cgggCGTGTACCGC‑AACCAGAAACGGTGAAATAAACAGGAAGGTAAATCCCGGCGGTTGGGTAATCCCCCCCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTc < 1:1330252/234‑1 (MQ=255)
cGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGGAACAG‑C‑AAA‑CCCCCCC‑CTTTTT‑CCCCGTTTTTCGGGGCGG‑CCGGGGAGTAAATCGCTAAAAAAA‑AGCCCCCCG‑CC‑CCAAAAAATTTTTAGTTA‑CCA‑G‑GGCGGGC‑AAAAACCCCCTCCCGGGACAACCATTTCAGGGGCgcggcggc > 2:1559389/1‑236 (MQ=255)
cGTGTACCAC‑AAACAGAAACGGTGAAATGAACAGGAAGGAAAATCCCAGGGGTTCGGTAATCCCCCCCAGCAGGGCGG‑TTAA‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCt < 1:992510/238‑1 (MQ=255)
tcacccagC‑AAGCACCAACGATGAAATAAACAGAAAGGAAAATCCCCGGGGTTGGGAACTCCCCCCCACAAGGGCGT‑TGAG‑GG‑TTGCGGGAAGCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTc < 2:245784/231‑1 (MQ=255)
aCCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGAAAATTCCAGCGGTTCGGTAATCCCCCCGAGCATGGGTG‑TTAA‑GG‑TTGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑‑AAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 1:1141075/239‑1 (MQ=255)
ccGC‑AAACAGCAAGGGTAAAAGAAAAGGGAAGGAAAATCCCGGGGTTGCGGTAATCCCCACCAGCAGGGGGT‑TTAG‑GG‑TTGCGGAAATCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 2:885356/239‑1 (MQ=255)
ccGA‑AAACAGCAGGGGAAAAAGGAAAAGGAGGTAAAATCCCAGCGGTTCGGAAATTCCCACCAGCAGGGGGG‑TTAA‑GG‑TGGGGGGAACCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTg < 1:376099/239‑1 (MQ=255)
cGC‑AAACAGCAACGGGGAAATGAACAGGAAGGTAAATCCCAGGGGTTCGGAAATTCCCCCCAGCAGGGCGG‑TTAA‑GT‑TTGGGGAAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑Ca < 1:260623/127‑1 (MQ=255)
gaaaaCAGCAACGGTGAAATGAAAAGGAAGGTAAATCCCAGCGGTTCGGTACTCCCCCCCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGaa < 1:1584884/237‑1 (MQ=255)
aGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGCTTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑AGCCCACGG‑CA‑CCCAAGAtttttta > 1:167255/1‑165 (MQ=255)
cAACGGTAAAAGAAACAGGAAGTAAAATCCCAGCGGTTGGGTAATTCCCACCAGCAGGGCGG‑TTAA‑GG‑TGGGGGAAATAAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCa < 1:1174008/239‑1 (MQ=255)
tGAAAAGAAAGGGAAGGTAAATTCCGGCGGTTCGGTAATTCCCACCGGCAGGGCGG‑TTAA‑GG‑TGGCGGGAAACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAG‑TA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:704548/238‑1 (MQ=255)
gaaataagaaGGAAGTTAAATTCCAGCGGTGCGTTAATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:860232/229‑1 (MQ=255)
gaaagaaaCGGGAATATATATTCCTGGGCTGCGGTAATTCCGACCAGCATGGCGT‑TAAA‑GG‑GGGGGGGAAACAG‑C‑AGC‑GCCGCCA‑CTTTTA‑CCCGATTGACCGGTGCGG‑CATTGAAGTACATCGCTAGAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATGTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 2:1376694/232‑1 (MQ=255)
gaaaaaaaCAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGAATGGCGG‑TTAA‑GG‑TTGGGGAAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:427958/232‑1 (MQ=255)
aaaaggaaaaggaAGGTAACTCCCAGGGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATAAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:557922/237‑1 (MQ=255)
aaaaTGAACAGGAAGGTAAATCCCAGCGGTGCGGTAATTCCCCCCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtgct < 1:1559389/237‑1 (MQ=255)
aaaTGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑GTGCGGGAATCAG‑C‑AAA‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTTAGTTA‑ACG‑T‑TCAGGGC‑AAAAACGCCTTCCGGGGACAACGATTTCAGCGGCCCGGGGCTCAAACTGAACCCtttgcgaagctt > 1:1005672/1‑228 (MQ=255)
aaaaaaaagaaaGGTAATGTCAGGCGGTGCGTTAATCCCCACCAGTATGGGGT‑TTAG‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 2:1005672/229‑1 (MQ=255)
aaTAAAGAGGAGGATATATTCCGGCGGTTGGTTACTCCCCACCACTTTGGCGG‑TAAA‑GG‑GTGCGGGAACCAC‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTgcg < 2:1107280/239‑1 (MQ=255)
tGAACAGGAAGGAAAATCCCGGGGGTTGGGAAATCCCCACCAGCATGGCGG‑TTAG‑GG‑TTGCGGAAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 1:1582724/239‑1 (MQ=255)
acaaggaaggaAAGTCCCGGTGGTGCGGTAATCCCCCCCAGCAGGGGGG‑TTAA‑GG‑TTGCGGAAACCAG‑C‑AAC‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 2:154066/234‑1 (MQ=255)
aagaggaaggaAAATTCCGGGGGTGCGGTAATCCCCACCAGCA‑GGGGG‑TTAAGGG‑TGGGGGGAAACAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGcc < 2:1540977/234‑1 (MQ=255)
aCAGGAAGTTAAATTCCAGCGGTTCGGTAATCCCCACCAGCGGGGCGG‑TTAA‑GG‑TGGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAg < 1:363399/239‑1 (MQ=255)
cccAGCGGTTCGGTAATCCCCACCAGCATGGCGG‑TTAA‑GG‑TGGCGGGAACCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑Ca < 1:80950/89‑1 (MQ=255)
ttCCCCCCAGCAGGGCGT‑TTAA‑GG‑TTGGGGAAACCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGc < 1:1047455/144‑1 (MQ=255)
ccccaGCATGGCTG‑TTAG‑GT‑TTGGGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGAc < 1:557911/237‑1 (MQ=255)
aGCGTGTCGG‑TTAT‑GG‑TGGGGGAAATCAG‑C‑AAT‑CCCGCCA‑CTTTTA‑CCCGATTTTACGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGATTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCaaa < 1:1418366/239‑1 (MQ=255)
cATGGCGG‑TTAA‑GG‑TTGCGGGGATCAG‑C‑AAG‑CCCGCCC‑CTTTTA‑CCCGATTTTTCGGGGCGG‑CAGGGAAGGACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTT‑CCG‑T‑GCAGGGC‑AAAACCCCCCTCCGGGAACAACGATTTCAACGGCTCGGCGCGCCAACAGAACTCTTGCAGATGCTGCGGCCAGTACATCTTAATGCCGCCTTCAACAGCTGTCCGGCCACAGa > 2:555348/1‑239 (MQ=255)
ccGG‑TTAA‑GG‑TTGGGGAAACCAG‑A‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGAt < 1:1557621/235‑1 (MQ=255)
cGG‑TTAG‑GT‑TTGCGGAAACAGG‑C‑AAG‑CCCGCCA‑CTTTTC‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 1:1566291/238‑1 (MQ=255)
cGG‑TTAA‑GG‑TTGCGGAAATCAC‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTGCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 1:1666384/238‑1 (MQ=255)
ggtttgggg‑TGGCGGAAACCAC‑C‑ACG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATaaa < 2:1314174/231‑1 (MQ=255)
gaggg‑TTGCGGAAAACAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTc < 2:964818/236‑1 (MQ=255)
ttGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGCCCAAAGATAAACTGTCCGGAg > 2:1319105/1‑239 (MQ=255)
ggCGGGAAGCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGa < 1:580041/238‑1 (MQ=255)
gggAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGa > 2:368643/1‑239 (MQ=255)
gAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa < 1:840986/238‑1 (MQ=255)
gAATCAG‑A‑ACG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGaa < 1:310832/238‑1 (MQ=255)
tCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGAtg > 2:589813/1‑166 (MQ=255)
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ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTCAATCAGACCTCCGCCCA‑TGTTGCCCACCACACCAAAGAGATACATTACGGTCG‑ACATTGAGGCCGCCAGCACGGCGTGTACCGC‑AAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGG‑TTAA‑GG‑TTGCGGGAATCAG‑C‑AAG‑CCCGCCA‑CTTTTA‑CCCGATTTTCCGGTGCGG‑CAGTGAAGTACATCGCTAAAGAAA‑TGCCCACGG‑CA‑CCAAAGATTTTTGAGTTA‑CCG‑T‑GCAGGGC‑AAAACCGCCTTCCGGGAACAACGATTTCAGCGGCTCGGCGCTCAAACTGAACTCTTGCAGATGCTGCGCCCAGTACATCTGAATGCCGCCTTCAACAGCTGCCGGACCAAAGATAAACTGTCCGTAGATGAA > NC_000913/3862435‑3862904
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
