Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F110 I1 R1 18 47.7 1781824 90.5% 1612550 142.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,049,903 IS2 (–) +5 bp noncoding (5‑9/109 nt) spf → Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4049903 =0 (0.000)91 (1.870) 68/282 0.0 100% noncoding (5/109 nt) spf Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 40499070 (0.000)105 (2.150) 76/282 0.0 100% noncoding (9/109 nt) spf Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

CATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4050040‑4049903
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAA  >  NC_000913/4498181‑4498322
                                                                                                                                                                                                                                                                                        
CATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGAC                                                                                                                                           <  1:373989/143‑1
   CAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTACAAGGTCTGAACGCTAGCACATCTTACCTCTGTACCTCGCCTGG                                                                                                                                        >  1:316013/1‑143
    AGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGC                                                                                                                                       <  1:55789/143‑1
       CATTACTGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCC                                                                                                                                    <  2:501488/143‑1
        ATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCC                                                                                                                                   >  1:66620/1‑143
            CGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAA                                                                                                                               >  2:570181/1‑143
            CGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAA                                                                                                                               >  1:628925/1‑143
                 CTTTTCTGTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCC                                                                                                                          <  2:591143/143‑1
                   TTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACGTAGACTGGCCCCCTGAATCTCCAG                                                                                                                        >  2:254809/1‑143
                        TTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAAC                                                                                                                   <  1:655536/143‑1
                         TCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACC                                                                                                                  <  1:789515/143‑1
                         TCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACC                                                                                                                  >  1:707062/1‑143
                           GCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGGACATATTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAA                                                                                                                >  1:616770/1‑143
                            CCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCCGACCACCAAT                                                                                                               >  2:591690/1‑143
                            CCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCCGACAACCAAT                                                                                                               >  2:562670/1‑143
                            CCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAAT                                                                                                               >  1:624144/1‑143
                            CCCAATAAAAAACGCCCCAGTCAGTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGCTTACGTGACGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAAT                                                                                                               >  2:733595/1‑143
                             CCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCACCCAAATCCGATTACGGGACGTAAAAGGTCTGAAAGATAGAACACCTTACCTCCGTACCTAGACTGCCCCCCTCAACCTCCAGCCACCCAATg                                                                                                              >  2:76858/1‑142
                              CAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTTAGACCAAACCTATCACGTGCTGTATGATACCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATAT                                                                                                             >  1:412319/1‑143
                              CAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATAT                                                                                                             >  1:92958/1‑143
                               AATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAACGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCGCTGAATCTCCAGACAGCCAATATa                                                                                                            >  1:624330/1‑142
                                ATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGTCCCCTGAATCTCCAGACAACCAATATCA                                                                                                           <  2:108603/143‑1
                                      agCGCCCCAGTCAGTGCTGACGGGGGCGGCTAAAAGATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAtt                                                                                                     <  2:340017/141‑3
                                      AACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAA                                                                                                     <  1:324536/143‑1
                                      AACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAA                                                                                                     <  1:574532/143‑1
                                      AACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAA                                                                                                     <  1:675854/143‑1
                                         GCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAA                                                                                                  <  1:750762/143‑1
                                          aCCCACTCATTACTGACTTGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAG                                                                                                 <  1:215919/142‑1
                                          CCCCAGTCATTACTCACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAG                                                                                                 <  2:311764/143‑1
                                           CCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGT                                                                                                >  2:699265/1‑143
                                            CCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACCTACATACGTG                                                                                               >  2:706789/1‑143
                                              AGTCATTACTGTCTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGAT                                                                                             <  2:138333/143‑1
                                                TCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTAACTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGCTAG                                                                                           >  2:277065/1‑143
                                                 CATTACTGACGGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGT                                                                                          <  2:706940/143‑1
                                                  ATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATGAGTGATAGTC                                                                                         >  1:736011/1‑143
                                                   TTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGCCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGCATCTCCAGACCACCAATAGCCCCTAAATCAGTGAacacac                                                                                        >  2:92129/1‑137
                                                     ACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTA                                                                                      <  2:234749/143‑1
                                                      gTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTATGTGAAGTAAAAGGTCTGAAAGATCGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAACATCACTTAAATAAGTGATAGTCTTAA                                                                                     <  2:846374/142‑1
                                                      cgGACTGGGGCGGCTAAGATATTCAGCCAAAGCCGATTGCGTGAAGTAAAAGGGCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAA                                                                                     <  2:84098/141‑1
                                                      CTGACTGGGGCGTCTAAAATATTCAGCGAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACGTCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAA                                                                                     <  2:755001/143‑1
                                                      CTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAA                                                                                     <  1:167038/143‑1
                                                      CTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGAGAAGGAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAACTGATAGTCTTAA                                                                                     >  2:397090/1‑143
                                                        GACTGGGGCGGCTAAGAGATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATA                                                                                   <  2:53615/143‑1
                                                         ACTGGGGCAGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGA                                                                                                                       >  2:432425/1‑106
                                                         ACTGGGGCAGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGA                                                                                                                       <  1:432425/106‑1
                                                             GGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGT                                                                              >  1:16947/1‑143
                                                                 GGCTAAAATATCCCGCCAACTCCGATTACTTGAAGTAAAAGTGCTGAAAGATAGAACTTCTTACCTCTGTCCCTAGACTGGCCCCCTGATTCTCCAGACAACCATTATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTT                                                                          <  1:465290/143‑1
                                                                  GCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTA                                                                         <  1:570181/143‑1
                                                                   CTAAAATATTCAGCCAAATCCGATTACGTNAAGTAAAAGGTCTNAAAGATAGAACATCTTACCTCTGTACCTANACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAG                                                                        <  1:89302/143‑1
                                                                    TAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACT                                                                                                         <  2:883097/109‑1
                                                                    TAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGACCCCTGAATCTCCAGACAACCAATATCACT                                                                                                         >  1:883097/1‑109
                                                                        ATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAG                                                                   >  2:460477/1‑143
                                                                            TCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCAT                                                               <  1:701104/143‑1
                                                                              agcgagATCCCATTGCGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTG                                                             <  2:137562/137‑1
                                                                              AGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTG                                                             <  2:251576/143‑1
                                                                              AGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGGACCTAGACTGGCCCGCTGAATCTCCAGACAACCAATCTCACTTAACTCAGTGATAGTCTTAATACTAACTTTCAGCCTAGTCGTTG                                                             >  2:227827/1‑143
                                                                               GCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGG                                                            <  2:66620/143‑1
                                                                                CCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACTACTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGA                                                           <  2:766109/143‑1
                                                                                   AATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAA                                                        <  1:57972/143‑1
                                                                                    ATCGGAGTACGTGAAGCAGAAGGTCTGAGAGATAGAACAGCTTACCTCTGTACCTAGACGGGCCCCCTGAATCTCCAGACAACGAATATCACTTAAATAAGTGAGAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAAC                                                       <  2:296185/143‑1
                                                                                     TCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACA                                                      <  1:402973/143‑1
                                                                                       CGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGA                                                    >  2:119083/1‑143
                                                                                         ATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATG                                                  <  2:566526/143‑1
                                                                                          tttaGTGCAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGACTATCAAGACATCCAATCTCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGA                                                 <  2:720369/139‑1
                                                                                          gTACGTGAAGGAAAAGGTGTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGA                                                 <  1:396239/142‑1
                                                                                             cggGAAGTAAAAGGTCTGAAAGATAGAACTTCTTACCTCTGTACCTATACTGGCCGCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGGCTTAATACTAGTTTGTAGACTAGTCATTGGAGAACAGATGATTG                                              <  2:415222/140‑1
                                                                                              GTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGA                                             >  1:211060/1‑143
                                                                                              GTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTCAAATAAGTGATAGTCTTCATACTCGTTTTTAGACTAGTCATTGGCGAACAGTTGATTGA                                             >  1:59572/1‑143
                                                                                               TGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAT                                            <  1:515229/143‑1
                                                                                                    TAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGGCATTGGAGAACAGATGATTGATGTCTT                                       >  1:225863/1‑143
                                                                                                     AAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGAAAACGAATATCACTTAAATAAGTGATAGTATTAATACTAGTTATTAGACGAGTCATTGGAGAACAGATGAGTGATGTataa                                      >  1:696155/1‑139
                                                                                                      gAAGGTGTGGAAGATAGAAGATCTGACCTCTGTACATAGATTGGACCCCTGAATCTCCAGACAACCAATATCAGTGAAATAAGTGATAGTCTTAGTACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAG                                     <  2:807295/142‑1
                                                                                                             TGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                              <  1:699265/143‑1
                                                                                                             TGAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTCTTTAGTCTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                              >  2:306445/1‑143
                                                                                                              GAAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAG                             >  1:236183/1‑143
                                                                                                               AAAGATAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGAATTTAGACTTGTCATTGGAGAACAGAGGAGTGATGTGTTAGGGCCGGAGA                            >  1:120591/1‑143
                                                                                                                    TAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGC                       <  2:316013/143‑1
                                                                                                                    TAGAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGCGCCGGAGAAACGC                       >  2:422836/1‑143
                                                                                                                      GAACATCTTACCTCTGTCCCTAGACTGGCCCCCTGAATCTCCAGACAACCAATCTCACCTCAATAAGTGATAGTCTTAATACTAGCTTTTAGACTAGTCAGTGGCAAACAGATGATGGATGTCTTAGGGCAGGAGAAACGCAG                     >  2:195212/1‑143
                                                                                                                      GAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAG                     >  2:10901/1‑143
                                                                                                                      GAACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAG                     >  1:584415/1‑143
                                                                                                                       AACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGTCCGGAAACACGCAGc                    >  2:755897/1‑142
                                                                                                                       AACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGA                    >  1:617638/1‑143
                                                                                                                       AACATCTTACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAGGTCTTAGGGCCGGAGAAACGCAGA                    >  2:96688/1‑143
                                                                                                                           TCTTCCCTCTGTCCCGAGACGGGCCCCCTGAATCTACATACAACCAATATCACTTAAATAAGTGATAGTCTTAATCAAAAAATTCAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGC                <  2:822191/143‑1
                                                                                                                               ACCTCTGTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTAC            <  2:92958/143‑1
                                                                                                                                   CTGTACCTAGACTGGCCCCCTGAATCTCCAGACCACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTCGTCATTGGAGAACAGATGACTGATGTCTTAGGGCAGGAAGAACGCAGACGGCCTACCgcg        >  2:282451/1‑140
                                                                                                                                     GTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGCGGACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACAGCGTACCACACA      >  1:407656/1‑143
                                                                                                                                     GTACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA      >  1:340839/1‑143
                                                                                                                                      tatCTAGACTGGCCCCCTGAATCTCCATACAACCAATATCTCTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGCACAGATAGTAAAAGTCTTGTGGCCGGAGAAACGCAGACGGCGTACCACACAG     <  2:190105/140‑1
                                                                                                                                         CTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACCGGAA  >  2:558571/1‑143
                                                                                                                                                                                                                                                                                        
CATCAGGCATTACGGATCTTTTCTTTCGCCCAATAAAAAACGCCCCAGTCATTACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGTAAAAGGTCTGAAAGATAGAACATCTTACCTCTGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4050040‑4049903
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAA  >  NC_000913/4498181‑4498322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A