Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A69 F2000 I2 R1 32 130.0 2789900 93.6% 2611346 220.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_007779_cfb 2,409,829 C→A intergenic (‑87/+544) nuoA ← / ← lrhA NADH:ubiquinone oxidoreductase, membrane subunitA/DNA‑binding transcriptional repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_007779_cfb2,409,8290CA95.6% 366.5 / 6.8 114intergenic (‑87/+544)nuoA/lrhANADH:ubiquinone oxidoreductase, membrane subunitA/DNA‑binding transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base A (54/55);  minor base . (3/2);  total (57/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.63e-01

Only 100 of 117 total aligned reads displayed.

CGGATTCAAACGGCACGTTTTTCGACCTCGCGCGTGC‑GCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAACCTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGTCTATTTTGACAGGAATTTGTGT  >  NC_007779_cfb/2409586‑2410073
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
cGGATTCAAACGGCACGTTTTTCGACCTCGCGCGTGC‑GCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACa                                                                                                                                                                                                                                                <  1:945999/250‑1 (MQ=255)
   tttCAACCGGCAGTGTTTCCGCCCACGCGCGACC‑CGGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACGCAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATTTTGACATACGCATTGCTTACTCAGCAAAAATAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACAACGATTCATGGGGATGAAT‑AAAAAAAAACTTACAATc                                                                                                                                                                                                                                             <  2:542777/249‑1 (MQ=255)
      cAAACGGCACGTTTTTCGACCTCGCGCGTGC‑GCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑ACAAAAAAACTTACNATNACt                                                                                                                                                                                                                                          >  2:1175536/1‑250 (MQ=255)
       aaaaGGNCCGTTTTGCGACCCCGGGCGGGC‑GCACCCGCCAAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATGAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCGGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTg                                                                                                                                                                                                                                         <  2:1090679/250‑1 (MQ=255)
        aaCGGCAC‑TTTTTCGACCTCGCGCGGGCGGCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGt                                                                                                                                                                                                                                        <  2:641673/250‑1 (MQ=255)
             cACGTTTTTCGACCTCGCGCGTGC‑GCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGaaa                                                                                                                                                                                                                                   >  1:44877/1‑250 (MQ=255)
                               gcgTGC‑GCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAAt                                                                                                                                                                                                                 <  1:690251/250‑1 (MQ=255)
                                   gc‑gcGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATCCTTTTATACAGCTAATTGAt                                                                                                                                                                                                             <  2:44877/250‑1 (MQ=255)
                                    c‑gcgACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGCAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCttt                                                                                                                                                                                                                             <  2:796287/233‑1 (MQ=255)
                                      gcgACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGAtgt                                                                                                                                                                                                           >  2:1177412/1‑250 (MQ=255)
                                        gACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATAc                                                                                                                                                                                                                        >  2:660125/1‑235 (MQ=255)
                                        gACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATAc                                                                                                                                                                                                                        <  1:660125/235‑1 (MQ=255)
                                                   aaccaaccGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGt                                                                                                                                                                                                                                        >  2:623909/1‑208 (MQ=255)
                                                   aaccaaccGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGt                                                                                                                                                                                                                                        <  1:623909/208‑1 (MQ=255)
                                                       aaccGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTc                                                                                                                                                                                          >  2:760488/1‑250 (MQ=255)
                                                        accGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCttt                                                                                                                                                                                                                             >  1:740944/1‑214 (MQ=255)
                                                        accGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTAttt                                                                                                                                                                                                                             <  2:740944/214‑1 (MQ=255)
                                                          cGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACt                                                                                                                                                                                                                                          >  1:815638/1‑199 (MQ=255)
                                                               aCCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCt                                                                                                                                                                                  <  2:384025/250‑1 (MQ=255)
                                                                      tCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCa                                                                                                                                                                           <  1:1177412/250‑1 (MQ=255)
                                                                            aaCACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAAt                                                                                                                                                                                                                                              <  2:322069/177‑1 (MQ=255)
                                                                            aaCACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAAt                                                                                                                                                                                                                                              >  1:322069/1‑177 (MQ=255)
                                                                            aaCACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTa                                                                                                                                                                     <  1:1370285/250‑1 (MQ=255)
                                                                                   gCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAg                                                                                                                                                              >  2:185072/1‑250 (MQ=255)
                                                                                       aTGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAAc                                                                                                                                                                         >  2:886030/1‑235 (MQ=255)
                                                                                       aTGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAAc                                                                                                                                                                         <  1:886030/235‑1 (MQ=255)
                                                                                         ggCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTttctt                                                                                                                                                        >  1:97952/1‑250 (MQ=255)
                                                                                             aCGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTa                                                                                                                                                                     <  2:1334555/233‑1 (MQ=255)
                                                                                             aCGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTa                                                                                                                                                                     >  1:1334555/1‑233 (MQ=255)
                                                                                             aCGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTTNTcacn                                                                                                                                                    >  2:787357/1‑249 (MQ=255)
                                                                                                 tAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAg                                                                                                                                                >  1:1150083/1‑250 (MQ=255)
                                                                                                           aGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACataat                                                                                                                                      <  1:760488/250‑1 (MQ=255)
                                                                                                           aGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACataat                                                                                                                                      >  1:1015715/1‑250 (MQ=255)
                                                                                                             cGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAAt                                                                                                                                                                                                                                              >  2:286731/1‑144 (MQ=255)
                                                                                                             cGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAAt                                                                                                                                                                                                                                              <  1:286731/144‑1 (MQ=255)
                                                                                                               aaTGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAAt                                                                                                                                                                                                                                              <  1:509624/142‑1 (MQ=255)
                                                                                                               aaTGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAAt                                                                                                                                                                                                                                              >  2:509624/1‑142 (MQ=255)
                                                                                                                    ccAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGtt                                                                                                                                              >  1:266523/1‑233 (MQ=255)
                                                                                                                      aGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAATAAAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGtttt                                                                                                                                                                                                     <  1:872100/177‑1 (MQ=255)
                                                                                                                      aGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAATAAAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGtttt                                                                                                                                                                                                     >  2:872100/1‑177 (MQ=255)
                                                                                                                      aGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTc                                                                                                                                                                                               >  2:164088/1‑182 (MQ=255)
                                                                                                                      aGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTc                                                                                                                                                                                               <  1:164088/182‑1 (MQ=255)
                                                                                                                           tgaGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACAtt                                                                                                                                                  <  2:580697/222‑1 (MQ=255)
                                                                                                                             aGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTta                                                                                                                                                                                                                           <  2:196804/147‑1 (MQ=255)
                                                                                                                             aGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTta                                                                                                                                                                                                                           >  1:196804/1‑147 (MQ=255)
                                                                                                                             aGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCGACTTTGACAAAAGTTTCTTCACATTAGTTTACataat                                                                                                                                      <  2:1354202/232‑1 (MQ=255)
                                                                                                                                   gACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAA‑CTTACAATCACTGTAGaaa                                                                                                                                                                                                                                   >  2:99288/1‑132 (MQ=255)
                                                                                                                                         aGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGATTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTc                                                                                                        >  1:1009586/1‑250 (MQ=255)
                                                                                                                                               tGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCATCCCa                                                                                                  <  2:1009586/250‑1 (MQ=255)
                                                                                                                                                gTTAACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGTACGCCACATCGATTCATGGGGAGGACT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGCTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAATTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAg                                                                                                 >  2:735374/1‑250 (MQ=255)
                                                                                                                                                    aCATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAACAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCAttt                                                                                                                   <  1:1308243/228‑1 (MQ=255)
                                                                                                                                                             ttGCTTACTCATCAAAAGTAGCGCCAGAGTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACt                                                                                    <  2:97952/250‑1 (MQ=255)
                                                                                                                                                               gCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTaa                                                                                                                                                                    >  2:507322/1‑168 (MQ=255)
                                                                                                                                                               gCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTaa                                                                                                                                                                    <  1:507322/168‑1 (MQ=255)
                                                                                                                                                                cTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCtata                                                                                                                                                                                      >  1:599500/1‑149 (MQ=255)
                                                                                                                                                                 ttACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACt                                                                                                                                                                                                >  1:99608/1‑138 (MQ=255)
                                                                                                                                                                 ttACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTa                                                                                                                                            >  1:247566/1‑190 (MQ=255)
                                                                                                                                                                 ttACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTa                                                                                                                                            <  2:247566/190‑1 (MQ=255)
                                                                                                                                                                  tACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAA‑CTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACaaaa                                                                                                                                                               <  2:476658/169‑1 (MQ=255)
                                                                                                                                                                  tACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAA‑CTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACaaaa                                                                                                                                                               >  1:476658/1‑169 (MQ=255)
                                                                                                                                                                     tcatcaAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTcc                                                                                  >  1:1363940/1‑244 (MQ=255)
                                                                                                                                                                     tcatcaAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCAAATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTcc                                                                                  <  2:1363940/244‑1 (MQ=255)
                                                                                                                                                                           aaaGTAGCGCCAGATTCACTTCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAGAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGa                                                                      >  2:1363849/1‑250 (MQ=255)
                                                                                                                                                                           aaaGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGTAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACaaa                                                                                                                                                                <  1:184721/160‑1 (MQ=255)
                                                                                                                                                                           aaaGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGTAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACaaa                                                                                                                                                                >  2:184721/1‑160 (MQ=255)
                                                                                                                                                                                   gcCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAA‑CTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGa                                                             >  1:1381802/1‑250 (MQ=255)
                                                                                                                                                                                    ccAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGa                                                             >  2:1341044/1‑250 (MQ=255)
                                                                                                                                                                                        aTTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAGAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCg                                                         >  2:562427/1‑250 (MQ=255)
                                                                                                                                                                                        aTTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCg                                                         >  1:1316888/1‑250 (MQ=255)
                                                                                                                                                                                          tCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGCCTCCAGGATAATTAGATGTTGTTGAATCgtg                                                       <  2:1015715/250‑1 (MQ=255)
                                                                                                                                                                                           cACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCgtgt                                                      >  2:1207673/1‑250 (MQ=255)
                                                                                                                                                                                              tGCTC‑TCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGGTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGt                                                  >  2:621994/1‑250 (MQ=255)
                                                                                                                                                                                                 ctctCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGGTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTtg                                                <  1:621994/247‑1 (MQ=255)
                                                                                                                                                                                                    tCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAg                                                                                                 >  1:1177015/1‑198 (MQ=255)
                                                                                                                                                                                                    tCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAg                                                                                                 <  2:1177015/198‑1 (MQ=255)
                                                                                                                                                                                                      aCGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAg                                           <  1:1207673/250‑1 (MQ=255)
                                                                                                                                                                                                        ggCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAg                                                                                                 <  1:1155942/194‑1 (MQ=255)
                                                                                                                                                                                                        ggCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAg                                                                                                 >  2:1155942/1‑194 (MQ=255)
                                                                                                                                                                                                         gCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCGACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCaa                                                                                                                                 >  1:827076/1‑161 (MQ=255)
                                                                                                                                                                                                         gCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCGACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCaa                                                                                                                                 <  2:827076/161‑1 (MQ=255)
                                                                                                                                                                                                           aGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCa                                                                                                                                  >  1:60338/1‑158 (MQ=255)
                                                                                                                                                                                                           aGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACATGAACAAAAGTTTCTTCACATTAGTTTACATAATATCa                                                                                                                                  <  2:60338/158‑1 (MQ=255)
                                                                                                                                                                                                             aTGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGa                                    <  2:1316888/250‑1 (MQ=255)
                                                                                                                                                                                                               ggACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGaaa                                  >  1:189936/1‑250 (MQ=255)
                                                                                                                                                                                                                    ccACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTATCAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTgacg                                                                                       >  1:767222/1‑192 (MQ=255)
                                                                                                                                                                                                                    ccACATCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTATCAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTgacg                                                                                       <  2:767222/192‑1 (MQ=255)
                                                                                                                                                                                                                      acaTCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATTCg                           <  1:1363849/250‑1 (MQ=255)
                                                                                                                                                                                                                       caTCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCtt                                                                                           >  2:1031559/1‑185 (MQ=255)
                                                                                                                                                                                                                       caTCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCtt                                                                                           <  1:1031559/185‑1 (MQ=255)
                                                                                                                                                                                                                         tCGATTCATGGGGAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGt                        >  1:74994/1‑250 (MQ=255)
                                                                                                                                                                                                                                   gggAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATATCCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTga                                                                                         <  1:1158273/175‑1 (MQ=255)
                                                                                                                                                                                                                                   gggAGGAAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTGTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTga                                                                                         >  2:1158273/1‑175 (MQ=255)
                                                                                                                                                                                                                                    ggaggaAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACGAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTc                                                                                   <  2:438352/180‑1 (MQ=255)
                                                                                                                                                                                                                                     gaggaAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCAt                                                                                                                     <  2:561268/145‑1 (MQ=255)
                                                                                                                                                                                                                                     gaggaAT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCAt                                                                                                                     >  1:561268/1‑145 (MQ=255)
                                                                                                                                                                                                                                         aaT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGTCTATTTTGACAGGAAt        >  2:67570/1‑250 (MQ=255)
                                                                                                                                                                                                                                          aT‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCt                                                                                                           >  1:484953/1‑150 (MQ=255)
                                                                                                                                                                                                                                           t‑AAAAAAAAACTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGTCTATTTTGACAGGAAttt      <  1:67570/250‑1 (MQ=255)
                                                                                                                                                                                                                                              aaaaaaaaCTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGCCTATTTTGACAGGAATTtgt    <  2:1381802/250‑1 (MQ=255)
                                                                                                                                                                                                                                                aaaaaaCTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGTCTATTTTGACAGGAATTTgtgt  >  1:721566/1‑250 (MQ=255)
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                    
CGGATTCAAACGGCACGTTTTTCGACCTCGCGCGTGC‑GCGACCGCCTAAAAACCAACCGCCTACCAGCATCAGGCAACACAGGCCAATGGCAACGATAAGAAAGATAGCGAATGCCCAGTGATGAGCGATGACTTCAGTGGATGTTGACATACTCATTGCTTACTCATCAAAAGTAGCGCCAGATTCACTGCTCTTCACGGCAGATGGACGCCACATCGATTCATGGGGAGGAAT‑AAAAAAAACCTTACAATCACTGTAGAAATTCTTTTATACAGCTAATTGATGTGGTTTTTTACTCCTTTCTATAACCTTTTGTCAACTTTAACAAAAGTTTCTTCACATTAGTTTACATAATATCAACACCATTAGCATTTAATGCCCTTTCACCCCAGATCCTTGACGACTCCAGGATAATTAGATGTTGTTGAATCGTGTCCGTTGTGAAGCAATGGAAAAAATACGGGTCTATTTTGACAGGAATTTGTGT  >  NC_007779_cfb/2409586‑2410073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A