Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F999 I1 R1 225 156.4 11709729 83.8% 9812752 75.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,429,527 Δ1 bp coding (40/510 nt) yrdD ← putative DNA topoisomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,429,5260C.99.2% 570.6 / ‑2.8 126coding (41/510 nt)yrdDputative DNA topoisomerase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base . (57/68);  minor base G (0/1);  total (57/69)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 135 total aligned reads displayed.

GAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGC  >  NC_000913/3429451‑3429597
                                                                           |                                                                       
gAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATc                                                                         >  2:4960402/1‑76 (MQ=255)
gAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATc                                                                         <  1:1247920/76‑1 (MQ=255)
gAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATc                                                                         >  1:5393719/1‑76 (MQ=255)
gAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATc                                                                         <  2:2542434/76‑1 (MQ=255)
gAAGATGTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATc                                                                         <  2:2552103/76‑1 (MQ=255)
 aaGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcg                                                                        <  2:667991/76‑2 (MQ=255)
  aGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcga                                                                       <  1:5194658/76‑3 (MQ=255)
   gATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcgaa                                                                      <  1:1095932/76‑4 (MQ=255)
      ttCAGAGTACTGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATaa                                                                  <  1:2531550/76‑1 (MQ=255)
         agagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAAccc                                                               >  2:1992579/1‑75 (MQ=255)
          gagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCa                                                               >  2:4954781/1‑75 (MQ=255)
           agGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGGT‑CGAATAACCAGt                                                             >  2:1536464/1‑76 (MQ=255)
            ggacggacGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGtt                                                            <  2:2036157/76‑1 (MQ=255)
             gacggacgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTc                                                           >  1:3973263/1‑76 (MQ=255)
              cctgacgTATTCACACGCCTGATACTGTGAGCATCCTAAAAACGGGCCGTGTTTCCCGGAT‑CGAATGACCAGTTCa                                                          <  1:3233994/73‑1 (MQ=255)
              acggacgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCa                                                          <  1:4612245/76‑1 (MQ=255)
                   cgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGcccc                                                     >  1:762728/1‑76 (MQ=255)
                   cgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGcccc                                                     <  2:2867148/76‑1 (MQ=255)
                   cgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGcccc                                                     <  1:3842315/76‑1 (MQ=255)
                    gTAGTCGCACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCg                                                    <  2:523727/76‑1 (MQ=255)
                    gTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCg                                                    >  1:237359/1‑76 (MQ=255)
                    gTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCg                                                    >  1:182871/1‑76 (MQ=255)
                    gTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGCGTTTCCCGGAT‑CGAATAACCAGTGCAGCCCCg                                                    >  2:3846989/1‑76 (MQ=255)
                    gTAGTCACACGCCGGATACGGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTGCAGCCCCg                                                    >  2:1980622/1‑76 (MQ=255)
                     tAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGCTCAGCCCCGc                                                   >  2:357061/1‑76 (MQ=255)
                     tAGGCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGc                                                   <  2:589822/76‑1 (MQ=255)
                      aGTCACACGCCGGATACTGTGAGCATCCAAGAAGCGTACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCa                                                  <  2:3813339/76‑1 (MQ=255)
                        tCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACt                                                >  2:4279236/1‑76 (MQ=255)
                         cacaCGCCGGATACTGTGAGCATCCAAGAAACTGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACtt                                               <  1:3055413/76‑1 (MQ=255)
                         cacaCGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACtt                                               <  1:4957296/76‑1 (MQ=255)
                          ccacGCCGGATACTGTGCGCCTCCAAGAAACGGCCCGTGTTTCCCGGAT‑AGAATAACCAGTTCAGCCCCGCACttt                                              >  2:4061487/2‑76 (MQ=255)
                          ccacGCCGGATACTGTGAGCATCCAAGAAGCGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCTCttt                                              <  1:5828984/75‑1 (MQ=255)
                          acacGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACttt                                              >  2:4009662/1‑76 (MQ=255)
                          acacGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACttt                                              <  1:3505118/76‑1 (MQ=255)
                          acacCCCGGCTAATGGGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACttt                                              >  1:1025027/1‑76 (MQ=255)
                            acGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTgg                                            <  1:1890704/76‑1 (MQ=255)
                            acGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTgg                                            <  2:5005923/76‑1 (MQ=255)
                            acGCCGGATACTGTGAGCATCCAAGAAAAGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTgg                                            <  1:1836625/76‑1 (MQ=255)
                             cGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTggg                                           >  1:4633906/1‑76 (MQ=255)
                             cGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTggg                                           <  1:645875/76‑1 (MQ=255)
                             cGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTggg                                           >  1:3821575/1‑76 (MQ=255)
                              gCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGc                                          >  2:3272111/1‑76 (MQ=255)
                              gCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGc                                          <  2:5197831/76‑1 (MQ=255)
                               ccGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCa                                         <  2:3488429/76‑1 (MQ=255)
                               ccGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCa                                         <  1:1295847/76‑1 (MQ=255)
                                cGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAg                                        <  2:2260985/76‑1 (MQ=255)
                                cGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAg                                        >  1:4750581/1‑76 (MQ=255)
                                cGGAGACAGTGAGCAGCCAATAAACGGACCGTGTTTCCAGGA‑GCGAATAACCAGTTCAGCCCCGCACTTTGGGCAg                                        <  2:2314065/76‑1 (MQ=255)
                                 ggATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAgg                                       >  2:1108883/1‑76 (MQ=255)
                                  gATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCCGGTCCGCCCCGCACTTTTGGCAggc                                      >  2:563984/1‑75 (MQ=255)
                                   aTACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGCTCAGCCCCGCACTTTGGGCAGGAc                                     <  1:357061/76‑1 (MQ=255)
                                    tACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGCT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACt                                    >  1:3367395/1‑76 (MQ=255)
                                    tACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACt                                    >  1:4795523/1‑76 (MQ=255)
                                    tACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACt                                    >  1:3341591/1‑76 (MQ=255)
                                    tACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACt                                    >  2:2436774/1‑76 (MQ=255)
                                      cTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCa                                  <  1:5080535/76‑1 (MQ=255)
                                       tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                 <  2:2013387/76‑1 (MQ=255)
                                       tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                 <  2:4890292/76‑1 (MQ=255)
                                       tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                 <  2:5124121/76‑1 (MQ=255)
                                       tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                 >  1:1039692/1‑76 (MQ=255)
                                       tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                 >  2:296658/1‑76 (MQ=255)
                                       tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                 >  2:3338011/1‑76 (MQ=255)
                                        gtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCatt                                >  1:5684040/1‑76 (MQ=255)
                                        gtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCatt                                <  1:2279329/76‑1 (MQ=255)
                                        gtgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCatt                                >  1:3892634/1‑76 (MQ=255)
                                         tgAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCatta                               >  1:1759738/1‑76 (MQ=255)
                                          gggCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCCCTTTGGGCAGGACTCattat                              <  2:5297772/74‑1 (MQ=255)
                                          gAGCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCattat                              <  1:5653264/76‑1 (MQ=255)
                                           ggCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCattatt                             <  2:4553113/75‑1 (MQ=255)
                                            gCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCAttatta                            <  1:1223951/76‑1 (MQ=255)
                                            gCATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCAttatta                            <  2:5594895/76‑1 (MQ=255)
                                             cATCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTAc                           <  2:3321721/76‑1 (MQ=255)
                                              aTCCAAGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACg                          >  1:5312259/1‑76 (MQ=255)
                                                   aGAAACGGACCGTGTTTCCCGGAT‑CGAATCACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCg                     >  2:29436/1‑76 (MQ=255)
                                                   aGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCg                     <  1:3179959/76‑1 (MQ=255)
                                                   aGAAACGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCg                     <  2:1441896/76‑1 (MQ=255)
                                                     aaaCGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTg                   >  1:1315654/1‑76 (MQ=255)
                                                      aaCGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGa                  <  1:1044146/76‑1 (MQ=255)
                                                       aCGGACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGGCTCATTATTACGCACCGTGaa                 >  1:5806064/1‑76 (MQ=255)
                                                          gcccGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAg              <  2:5560122/74‑1 (MQ=255)
                                                          gACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAg              >  1:2260398/1‑76 (MQ=255)
                                                          gACCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAg              <  1:1115451/76‑1 (MQ=255)
                                                           aCCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGt             <  1:3795918/76‑1 (MQ=255)
                                                           aCCGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGt             <  1:2857405/76‑1 (MQ=255)
                                                            ccGTGTTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCCCCGTGAACAGTg            <  1:3363512/76‑1 (MQ=255)
                                                             cGTGTTTCCCGGCT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCCCCGTGAACAGTGc           <  1:1755406/76‑1 (MQ=255)
                                                              gtgtTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCt          <  2:5338719/76‑1 (MQ=255)
                                                               tgtTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTg         >  2:4690392/1‑76 (MQ=255)
                                                               tgtTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTg         <  1:4279237/76‑1 (MQ=255)
                                                                gtTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGa        <  2:3687894/76‑1 (MQ=255)
                                                                gtTTCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGa        <  1:5600394/76‑1 (MQ=255)
                                                                 tttCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAt       >  1:3494074/1‑76 (MQ=255)
                                                                 tttCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAt       >  1:1589424/1‑76 (MQ=255)
                                                                   tCCCGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAttt     <  1:4009663/76‑1 (MQ=255)
                                                                    cccGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTc    <  1:4757635/76‑1 (MQ=255)
                                                                     ccGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCg   <  2:4952841/76‑1 (MQ=255)
                                                                     ccGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCg   <  1:4400757/76‑1 (MQ=255)
                                                                     ccGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCg   <  1:5153804/76‑1 (MQ=255)
                                                                      cGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGc  >  1:3991875/1‑76 (MQ=255)
                                                                      cGGAT‑CGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGc  >  1:751097/1‑76 (MQ=255)
                                                                           |                                                                       
GAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGC  >  NC_000913/3429451‑3429597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A