Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F1 I1 R1
|
771 |
44.8 |
2153074 |
94.1% |
2026042 |
109.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
380,022 |
(G)10→11 |
intergenic (‑141/+47) |
frmR ← / ← yaiO |
regulator protein that represses frmRAB operon/outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 380,012 | 1 | . | G | 77.8%
| 141.9
/ 35.7
| 54 | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (6/6); new base G (28/14); total (34/20) |
| Fisher's exact test for biased strand distribution p-value = 3.26e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCC > NC_000913/379877‑380150
|
ggCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑ggg > 2:129752/1‑139 (MQ=255)
ttCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑gggggg‑‑gg > 1:808158/1‑139 (MQ=255)
aCCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTa < 2:808158/139‑1 (MQ=255)
catgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGaa > 1:3/1‑139 (MQ=255)
tgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGG‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAg > 1:170357/1‑139 (MQ=255)
tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGa > 1:232769/1‑139 (MQ=255)
taGGGGGGTATTCTATATGTCAATGCATACCCCCCGATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGG‑GGGGGG‑‑GGGG‑TTAA‑TCGGCAGGGAAGGCCAcccgagat > 1:787446/1‑134 (MQ=255)
aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGG‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATa > 1:1008234/1‑139 (MQ=255)
aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAg > 1:851523/1‑139 (MQ=255)
gggggTCTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGTGAAGGCCGCCCCGGATAgcgg > 2:184508/1‑139 (MQ=255)
gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGTTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAgcggg < 2:232769/139‑1 (MQ=255)
gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAgcggg > 2:856601/1‑139 (MQ=255)
gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAgcggg > 1:304582/1‑139 (MQ=255)
gTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAgg > 2:77548/1‑120 (MQ=255)
gTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAgg < 1:77548/120‑1 (MQ=255)
tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAgg > 2:324567/1‑139 (MQ=255)
cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg > 2:487147/1‑139 (MQ=255)
tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGG‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACgg > 1:79042/1‑139 (MQ=255)
tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCt > 2:864147/1‑139 (MQ=255)
tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑g < 1:426492/58‑1 (MQ=255)
tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑g > 2:426492/1‑58 (MQ=255)
tataAAACTGGAGAATAAAATTTATCCGGTGAAGGGGGTCGGAAATCAAAGAGGAAA‑‑‑GGGGGGC‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGTGCt < 2:691022/139‑1 (MQ=255)
ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:869571/1‑139 (MQ=255)
aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAGAGAGGAAAGG‑GGGGGG‑‑GGGG‑CAAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGGGGCAGAAGGAATCAAAATTTCCAGGTCAGACGGGCTGc > 1:146803/1‑139 (MQ=255)
aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa > 2:544315/1‑139 (MQ=255)
aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCaa > 2:282718/1‑139 (MQ=255)
cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg > 2:183478/1‑132 (MQ=255)
cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg < 1:183478/132‑1 (MQ=255)
cacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAg > 2:412206/1‑139 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGG‑GGGGGG‑‑GGGG‑GTAA‑TCGGAAGGGAAGGCCGCCCCGGAAAGGGGGCGGCAGAAGGAATAAGAATTTCCGGGTAAGACGGGCGGCAGGtg > 2:414457/1‑138 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa < 2:272580/101‑1 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGa > 1:272580/1‑101 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 1:691022/1‑139 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 1:511645/1‑139 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 2:85568/1‑139 (MQ=255)
tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGGCCTAA‑TCGCCAGGGAAGGCCCCCCCGGTAAGCGGGGGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTg > 1:381457/1‑139 (MQ=255)
gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCgg > 2:430251/1‑66 (MQ=255)
gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCgg < 1:430251/66‑1 (MQ=255)
gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 1:324567/139‑1 (MQ=255)
agaAAAAAATTTATCCGGTGAATGGGGTCGGAAAACAAAGAGGAAAGG‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa < 2:146803/139‑1 (MQ=255)
aaTAAAATTTTTCCGGGGAAGGGTGTCGGAAAACAAAGGGGAAAGG‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa < 2:79042/139‑1 (MQ=255)
tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGG‑‑GGGG‑CAAA‑ACGGGAGGGAAGGCCGCCCCGGGTAGGGGGGGGGAAAAGGGAACAGAATTTCCAGGTCAGACGGGCTGCAAGTTGTAGAc > 2:446797/1‑139 (MQ=255)
aaaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGt > 1:846272/1‑139 (MQ=255)
aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatc > 1:350539/1‑139 (MQ=255)
ccGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAatcatc > 2:402800/1‑139 (MQ=255)
tGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGt > 2:409223/1‑139 (MQ=255)
tGAATGTGGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGt < 2:846272/139‑1 (MQ=255)
gAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg < 1:487147/139‑1 (MQ=255)
aTGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 1:282718/139‑1 (MQ=255)
tgtgGTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTggg < 2:869571/139‑1 (MQ=255)
ggTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 1:409223/139‑1 (MQ=255)
ggTCGGAAAACAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtg < 2:851523/139‑1 (MQ=255)
gTCGGAAAACAAAGGGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt < 1:85568/139‑1 (MQ=255)
gTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGT‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa < 2:151180/81‑1 (MQ=255)
gTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 1:151180/1‑81 (MQ=255)
aaaaaaaaGAGGAAAGG‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTa < 1:414457/139‑1 (MQ=255)
aaaaCAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc < 1:412206/139‑1 (MQ=255)
aaCAAAGGGGAAG‑‑‑GGGGGGGTGGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAcc < 2:170357/139‑1 (MQ=255)
aCAAAGAGGAAAG‑‑GGGGGG‑‑GGGG‑CTAA‑TAGGCAGGGAAGGCCGCCCCGGAAAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGATGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACcac > 2:470035/1‑139 (MQ=255)
aaa‑‑‑GGGGGG‑‑GGGG‑CCAACCCGGAAGGGCAGGCCGCCCCGGATAGAGGGCGGCAGACGGATACAGATCTTCCAGGTCAGACGGGCTGCAAGTGTCAGACCGGTAAAATCATCGGTCGGGGTGTCGTACCACACTTTACCt > 2:570288/1‑139 (MQ=255)
a‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGcc > 2:959089/1‑139 (MQ=255)
|
GGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑‑GGGGGG‑‑GGGG‑CTAA‑TCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCC > NC_000913/379877‑380150
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
