Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F1 I1 R1 776 60.0 3074904 90.1% 2770488 104.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,092,286 A→G Y2H (TAT→CAT)  pgaA ← biofilm adhesin polysaccharide PGA secretin, OM porin, poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,092,2860AG100.0% 250.1 / NA 70Y2H (TAT→CAT) pgaAbiofilm adhesin polysaccharide PGA secretin, OM porin, poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (31/39);  total (31/39)

CTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAACGCGGAAGAGAGACGTGAATTGTTGATGATGAGA  >  NC_000913/1092157‑1092420
                                                                                                                                 |                                                                                                                                      
cTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTa                                                                                                                               <  2:1002191/139‑1 (MQ=255)
 ttCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTAt                                                                                                                              >  1:557026/1‑139 (MQ=255)
 ttCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCT‑AAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTAtt                                                                                                                             <  2:1448619/139‑1 (MQ=255)
           aaTGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTAGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGt                                                                                                                    <  2:1339285/139‑1 (MQ=255)
            aTGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTa                                                                                                                   <  2:980351/139‑1 (MQ=255)
             tGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGTTACTTGAATGCATc                                                                                                                                    <  2:346896/121‑1 (MQ=255)
             tGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGTTACTTGAATGCATc                                                                                                                                    >  1:346896/1‑121 (MQ=255)
             tGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    >  2:448358/1‑121 (MQ=255)
             tGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    <  1:448358/121‑1 (MQ=255)
             tGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTAt                                                                                                                  >  1:670156/1‑139 (MQ=255)
                  catAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCa                                                                                                             <  2:945469/139‑1 (MQ=255)
                         gTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCa                                                                                                                                      >  2:1182278/1‑107 (MQ=255)
                          ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctct                                                                                                     >  2:215826/1‑139 (MQ=255)
                          ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctct                                                                                                     <  2:557026/139‑1 (MQ=255)
                          ttattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctct                                                                                                     <  1:778050/139‑1 (MQ=255)
                           tattaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctc                                                                                                    >  2:34920/1‑139 (MQ=255)
                            attaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   <  2:1313282/139‑1 (MQ=255)
                            attaACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   >  1:1053567/1‑139 (MQ=255)
                               aaCAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTTCTACTTCAATGCATCCTGTATTACTCCATGTATTGCCAAAATctctctct                                                                                                 <  2:180589/138‑1 (MQ=255)
                               aaCAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATctctctct                                                                                                 >  1:180589/1‑138 (MQ=255)
                                 cAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTa                                                                                                                               >  2:1487781/1‑106 (MQ=255)
                                 cAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTa                                                                                                                               <  1:1487781/106‑1 (MQ=255)
                                  aGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt                                                                                             <  2:1321736/139‑1 (MQ=255)
                                  aGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt                                                                                             <  2:1053567/139‑1 (MQ=255)
                                    cACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtct                                                                                                       <  2:855189/127‑1 (MQ=255)
                                    cACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtct                                                                                                       >  1:855189/1‑127 (MQ=255)
                                     aCTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTa                                                                                          >  1:1142838/1‑139 (MQ=255)
                                      ctctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTaa                                                                                         <  2:354224/139‑1 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    >  2:1277800/1‑95 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    <  1:1277800/95‑1 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCaaa                                                                                                           <  2:1251884/120‑1 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCaaa                                                                                                           >  1:1251884/1‑120 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctc                                                                                                      >  1:110649/1‑125 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctc                                                                                                      <  2:110649/125‑1 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAAt                                                                                        >  2:485679/1‑139 (MQ=255)
                                       tctTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAAt                                                                                        >  1:170954/1‑139 (MQ=255)
                                         ttCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    <  2:527521/93‑1 (MQ=255)
                                         ttCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    >  1:527521/1‑93 (MQ=255)
                                           cgccgcGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   >  1:149123/1‑124 (MQ=255)
                                           cgccgcGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   <  2:149123/124‑1 (MQ=255)
                                             ccgcGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAgg                                                                                  <  2:867878/139‑1 (MQ=255)
                                              cgcgGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCAATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCATGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGt                                                                                 >  1:11981/1‑139 (MQ=255)
                                                cgGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt                                                                                             >  1:1482566/1‑125 (MQ=255)
                                                cgGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTAt                                                                                             <  2:1482566/125‑1 (MQ=255)
                                                cgGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTaa                                                                               >  2:78387/1‑139 (MQ=255)
                                                 gggACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTa                                                                                                                   >  1:245447/1‑102 (MQ=255)
                                                 gggACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTa                                                                                                                   <  2:245447/102‑1 (MQ=255)
                                                 gggACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   >  1:656892/1‑118 (MQ=255)
                                                 gggACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   <  2:656892/118‑1 (MQ=255)
                                                      tCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    >  2:334508/1‑80 (MQ=255)
                                                      tCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATc                                                                                                                                    <  1:334508/80‑1 (MQ=255)
                                                                    gCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctct                                                                                                     <  1:563919/97‑1 (MQ=255)
                                                                    gCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctct                                                                                                     >  2:563919/1‑97 (MQ=255)
                                                                      ggCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGc                                                         <  1:78387/139‑1 (MQ=255)
                                                                           tAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCa                                                                                                             >  2:1521091/1‑82 (MQ=255)
                                                                           tAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCa                                                                                                             <  1:1521091/82‑1 (MQ=255)
                                                                                agTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAt                                               <  1:752443/139‑1 (MQ=255)
                                                                                agTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAt                                               <  2:1142838/139‑1 (MQ=255)
                                                                                     cAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAgg                                                                                  <  1:886913/99‑1 (MQ=255)
                                                                                     cAAAGCCCATTTGGTTTTCGGGCACCTTTGTCTGCTACTTGAATGTATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAgg                                                                                  >  2:886913/1‑99 (MQ=255)
                                                                                        aGCACATTTGGTTTTCAGTGACCTTTATCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAACATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAAGCCGttatt                                       <  2:11981/139‑1 (MQ=255)
                                                                                         gCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   >  1:797006/1‑78 (MQ=255)
                                                                                         gCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   <  2:797006/78‑1 (MQ=255)
                                                                                              tttGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCaaa                                                                                                           <  2:437238/65‑1 (MQ=255)
                                                                                              tttGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCaaa                                                                                                           >  1:437238/1‑65 (MQ=255)
                                                                                               ttGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGTACCTCATAATCCGTTATTAAAcgcg                                <  2:577477/139‑1 (MQ=255)
                                                                                               ttGGTTTTCGGGCACCTTTTTCTGCTACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAAcgcg                                <  1:215826/139‑1 (MQ=255)
                                                                                                                        tACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   <  1:1045647/47‑1 (MQ=255)
                                                                                                                        tACTTGAATGCATCCTGTATTACTCCATGTATTGCCAAAAtctctct                                                                                                   >  2:1045647/1‑47 (MQ=255)
                                                                                                                             gAATGCATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAACGCGGAAGAGAGACGTGAATTGTTGATGATgaga  <  1:34920/139‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                      
CTTCAATAATCAATGCATCATAGGCGTTATTAACAGCACTCTTCGCCGCGGGACTCGCTGCTAAAAATGCGGCAGTAAGAAGTTTCAAAGCCCATTTGGTTTTCGGGCACCTTTTTCTGCTACTTGAATACATCCTGTATTACTCCATGTATTGCCAAAATCTCTCTCTGTATCTAATTACAGGTAACTGAAAAGAAAGATATTTTTGCACCTCATAATCCGTTATTAAACGCGGAAGAGAGACGTGAATTGTTGATGATGAGA  >  NC_000913/1092157‑1092420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A