Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A13 F1 I1 R1 778 68.7 3228504 93.4% 3015422 109.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,493,219 A→G E250E (GAA→GAG)  trg → methyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,493,2190AG100.0% 249.9 / NA 70E250E (GAA→GAG) trgmethyl‑accepting chemotaxis protein III, ribose and galactose sensor receptor
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (35/35);  total (35/35)

TGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAACCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCACCAGCGAAATTTCAGCTGG  >  NC_000913/1493084‑1493353
                                                                                                                                        |                                                                                                                                      
tGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcg                                                                                                                                     >  1:1283226/1‑139 (MQ=255)
  gcgcGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcggc                                                                                                                                   >  1:1443197/1‑139 (MQ=255)
  gcgcGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcggc                                                                                                                                   >  1:719324/1‑139 (MQ=255)
  gcgcGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcggc                                                                                                                                   >  1:556149/1‑139 (MQ=255)
  gcgcGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcggc                                                                                                                                   <  1:924648/139‑1 (MQ=255)
  gcgcGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcggc                                                                                                                                   >  2:297094/1‑139 (MQ=255)
  gcgcGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCcggc                                                                                                                                   <  1:297094/139‑1 (MQ=255)
                  ccTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATc                                                                                                                   <  2:1486922/139‑1 (MQ=255)
                  ccTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATc                                                                                                                   >  2:903690/1‑139 (MQ=255)
                    tGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCgg                                                                                                                 >  2:1539220/1‑139 (MQ=255)
                     ggTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCTGt                                                                                                                >  2:931367/1‑139 (MQ=255)
                          tGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCtt                                                                                                           <  1:236477/139‑1 (MQ=255)
                          tGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGAAACAGGCCG‑ACAACCGGATTGAAAAAATCGCAAGTGGGGACCTGACGATGAATGATGAGCCGGCGGGCGGTAATGAAATCGGTCGCtt                                                                                                           >  2:292415/1‑139 (MQ=255)
                           gACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTa                                                                                                          >  1:521390/1‑139 (MQ=255)
                             cGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAg                                                                                                        <  2:77070/139‑1 (MQ=255)
                                tGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCTACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAgtcg                                                                                                     >  2:1126653/1‑139 (MQ=255)
                                      cATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCAttt                                                                                               <  1:576221/139‑1 (MQ=255)
                                      cATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCAttt                                                                                               <  2:1443197/139‑1 (MQ=255)
                                       aTTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTa                                                                                              >  1:483212/1‑139 (MQ=255)
                                        tttATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAg                                                                                                        <  2:7754/128‑1 (MQ=255)
                                        tttATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAg                                                                                                        >  1:7754/1‑128 (MQ=255)
                                        tttATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTAc                                                                                             <  2:177371/139‑1 (MQ=255)
                                            tGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTa                                                                                                                           <  2:1502814/105‑1 (MQ=255)
                                            tGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTa                                                                                                                           >  1:1502814/1‑105 (MQ=255)
                                                 cTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGc                                                                                          >  2:578564/1‑133 (MQ=255)
                                                 cTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGc                                                                                          >  2:69062/1‑133 (MQ=255)
                                                 cTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGc                                                                                          <  1:578564/133‑1 (MQ=255)
                                                 cTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGc                                                                                          <  1:69062/133‑1 (MQ=255)
                                                 cTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCaa                                                                                        >  2:853891/1‑135 (MQ=255)
                                                 cTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCaa                                                                                        <  1:853891/135‑1 (MQ=255)
                                                    cGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATgcagc                                                                                 >  1:1581667/1‑139 (MQ=255)
                                                     gTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCTGTCGATTAAGTCGTCATTTACAGCAAATgcagca                                                                                <  1:931367/139‑1 (MQ=255)
                                                         gATCGTCATTCGTCCACTGCTACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCa                                                                            <  1:1126653/139‑1 (MQ=255)
                                                         gATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAgtcgtc                                                                                                   >  2:540266/1‑116 (MQ=255)
                                                         gATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAgtcgtc                                                                                                   <  1:540266/116‑1 (MQ=255)
                                                          aTCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGAAGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGATTAAGTCGTCATTTACAGCAAATGCAGCATTCAc                                                                           >  1:390849/1‑139 (MQ=255)
                                                              tCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTggg                                                                       <  1:91262/139‑1 (MQ=255)
                                                                 ttCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGAt                                                                    <  2:556149/139‑1 (MQ=255)
                                                                  tCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATg                                                                   <  1:1132404/139‑1 (MQ=255)
                                                                  tCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATg                                                                   <  2:521390/139‑1 (MQ=255)
                                                                   cGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGa                                                                  <  2:1283226/139‑1 (MQ=255)
                                                                   cGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGa                                                                  >  1:533103/1‑139 (MQ=255)
                                                                    gTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGAt                                                                    >  2:537248/1‑136 (MQ=255)
                                                                    gTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGAt                                                                    <  1:537248/136‑1 (MQ=255)
                                                                      ccACTGCAACATGCCGCACAA‑CGGATTGATAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAg                                                               >  2:1075289/1‑139 (MQ=255)
                                                                         cTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGaa                                                                                                                      >  2:352798/1‑81 (MQ=255)
                                                                         cTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGaa                                                                                                                      <  1:352798/81‑1 (MQ=255)
                                                                          tGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAgg                                                           <  1:292415/139‑1 (MQ=255)
                                                                               cATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAAt                                                                                      >  2:206421/1‑107 (MQ=255)
                                                                               cATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAAt                                                                                      <  1:206421/107‑1 (MQ=255)
                                                                                      cacaA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCaa                                                                                        >  2:405029/1‑98 (MQ=255)
                                                                                      cacaA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCaa                                                                                        <  1:405029/98‑1 (MQ=255)
                                                                                      cacaA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATgcagc                                                                                 <  1:856846/105‑1 (MQ=255)
                                                                                      cacaA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTAGTCATTTACAGCAAATgcagc                                                                                 >  2:856846/1‑105 (MQ=255)
                                                                                               atcgAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCgg                                       >  2:1329546/4‑139 (MQ=255)
                                                                                                ttGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGa                                      <  1:1539220/139‑1 (MQ=255)
                                                                                                    aaaaaTCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGa                                                                     >  2:1131813/1‑104 (MQ=255)
                                                                                                    aaaaaTCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGa                                                                     <  1:1131813/104‑1 (MQ=255)
                                                                                                      aaaTCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAgtcg                                                                                                     >  2:1546252/1‑70 (MQ=255)
                                                                                                      aaaTCGCCAGTGGCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAgtcg                                                                                                     <  1:1546252/70‑1 (MQ=255)
                                                                                                        aTCGCCAGTGGCGATCTGACGATGAATGGTGAGCCGGCGGATGGTAGTGAAATCGGTCGCTTAAGTGGTCATTTAGAGCAATGACAGCATTCACGGGTGGTTGCAGTAGGGACTGTGCGACGGGTCGCAGaataacttt                              >  1:303617/1‑132 (MQ=255)
                                                                                                                 ggCGATCTGACGATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCa                     <  2:73733/139‑1 (MQ=255)
                                                                                                                         gACGATGAATGATGAGGCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGa                                                                     <  2:217222/83‑1 (MQ=255)
                                                                                                                         gACGATGAATGATGAGGCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGa                                                                     >  1:217222/1‑83 (MQ=255)
                                                                                                                            gATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGgcg                                          >  2:617862/1‑107 (MQ=255)
                                                                                                                            gATGAATGATGAGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGgcg                                          <  1:617862/107‑1 (MQ=255)
                                                                                                                                aatgaTGAGCCGGCGGGTCGTAATGAAATCGGTCGCtt                                                                                                           <  2:560191/38‑1 (MQ=255)
                                                                                                                                aatgaTGAGCCGGCGGGTCGTAATGAAATCGGTCGCtt                                                                                                           >  1:560191/1‑38 (MQ=255)
                                                                                                                                  tgatgaGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCACCAGCGAAATTTCAGCt    >  2:794258/1‑139 (MQ=255)
                                                                                                                                    atgaGCCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCACCAGCGAAATTTCAGCTgg  <  2:549004/139‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                      
TGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAA‑CGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAACCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCACCAGCGAAATTTCAGCTGG  >  NC_000913/1493084‑1493353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A