Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F1 I1 R1 770 68.5 3470224 91.7% 3182195 103.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 486,641 T→C S36P (TCA→CCA)  mscK → mechanosensitive channel protein, intermediate conductance, K+ regulated

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913486,6410TC100.0% 266.7 / NA 75S36P (TCA→CCA) mscKmechanosensitive channel protein, intermediate conductance, K+ regulated
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (36/39);  total (36/39)

CAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCT  >  NC_000913/486512‑486768
                                                                                                                                 |                                                                                                                               
cAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATg                                                                                                                        <  2:1248202/139‑1 (MQ=255)
      cAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATg                                                                                                                        <  2:486067/133‑1 (MQ=255)
      cAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATg                                                                                                                        >  1:486067/1‑133 (MQ=255)
      cAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGAt                                                                                                                   <  2:1301334/138‑1 (MQ=255)
      cAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGAt                                                                                                                   >  1:1301334/1‑138 (MQ=255)
              ttcattcaTCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCa                                                                                                                               <  1:438213/118‑1 (MQ=255)
              ttcattcaTCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCa                                                                                                                               >  2:438213/1‑118 (MQ=255)
              ttcattcaTCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACa                                                                                                          >  2:1633593/1‑139 (MQ=255)
              ttcattcaTCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACa                                                                                                          >  2:1324366/1‑139 (MQ=255)
                       catGACTATGCTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCg                                                                                                                            >  2:560811/1‑112 (MQ=255)
                       catGACTATGCTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCg                                                                                                                            <  1:560811/112‑1 (MQ=255)
                          gACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  1:1324366/139‑1 (MQ=255)
                          gACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  1:1633593/139‑1 (MQ=255)
                          gACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              >  1:1251964/1‑139 (MQ=255)
                          gACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  1:888373/139‑1 (MQ=255)
                          gACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCAGTTATTGCTTTTGATTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  2:215865/139‑1 (MQ=255)
                                 ttCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGgcgc                                                                                       >  1:348410/1‑139 (MQ=255)
                                       tATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTg                                                                                 >  2:1724609/1‑139 (MQ=255)
                                        aTTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGTCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGa                                                                                <  2:348410/139‑1 (MQ=255)
                                        aTTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGa                                                                                <  2:1325173/139‑1 (MQ=255)
                                           aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTTCCGACAAAAGCGGACCTGCAGgcg                                                                                        >  1:1046988/1‑128 (MQ=255)
                                           aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  1:680281/122‑1 (MQ=255)
                                           aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              >  2:680281/1‑122 (MQ=255)
                                           aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGgcg                                                                                        <  2:1046988/128‑1 (MQ=255)
                                           aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTg                                                                                 <  1:48959/135‑1 (MQ=255)
                                           aCAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTg                                                                                 >  2:48959/1‑135 (MQ=255)
                                               aCGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACta                                                                         >  1:1330995/1‑139 (MQ=255)
                                                   tCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACtaaata                                                                     <  1:612756/139‑1 (MQ=255)
                                                       ggCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCAt                                                                                                                              >  2:407657/1‑78 (MQ=255)
                                                       ggCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCAt                                                                                                                              <  1:407657/78‑1 (MQ=255)
                                                             ttGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCa                                                                                                                               <  2:944237/71‑1 (MQ=255)
                                                             ttGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCa                                                                                                                               >  1:944237/1‑71 (MQ=255)
                                                                                tGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACaaa                                        <  2:1251964/139‑1 (MQ=255)
                                                                                    tttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTgg                                    >  1:417906/1‑139 (MQ=255)
                                                                                    tttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTgg                                    >  1:1355566/1‑139 (MQ=255)
                                                                                     ttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATc                                                                                                                             >  1:927983/1‑49 (MQ=255)
                                                                                     ttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATc                                                                                                                             <  2:927983/49‑1 (MQ=255)
                                                                                     ttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGAc                                                                                                           <  1:1187691/67‑1 (MQ=255)
                                                                                     ttgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCAATCGAATGGTGATCTGCCGAc                                                                                                           >  2:1187691/1‑67 (MQ=255)
                                                                                      tgtttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTg                                  >  1:513691/1‑139 (MQ=255)
                                                                                         ttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcag                               <  1:129018/139‑1 (MQ=255)
                                                                                         ttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcag                               <  2:417906/139‑1 (MQ=255)
                                                                                         ttttgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTgcag                               <  1:1724609/139‑1 (MQ=255)
                                                                                            tgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGc                                                  <  2:854085/117‑1 (MQ=255)
                                                                                            tgtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGc                                                  >  1:854085/1‑117 (MQ=255)
                                                                                             gtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  2:723070/72‑1 (MQ=255)
                                                                                             gtCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              >  1:723070/1‑72 (MQ=255)
                                                                                                    tATGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGAc                    <  2:1330995/139‑1 (MQ=255)
                                                                                                     aTGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTc                                                <  1:1702458/110‑1 (MQ=255)
                                                                                                     aTGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTc                                                >  2:1702458/1‑110 (MQ=255)
                                                                                                      tGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAg                  <  1:878097/139‑1 (MQ=255)
                                                                                                      tGCCAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAg                  <  2:513691/139‑1 (MQ=255)
                                                                                                        ccAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACa                   >  1:777914/1‑136 (MQ=255)
                                                                                                        ccAGAACACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACa                   <  2:777914/136‑1 (MQ=255)
                                                                                                           gAACACGGCGTTTGCGCGTGCGCCATCCAATGGTGATCTGCCGGCAAAAGCGGACCGGCCGGGGCAACTTGACTGACAAAATAGACAAAAAGATCTTTCTGCTCAGCACAAACTGGTGCAGCGGGGACTGACAGATACa             >  2:632574/1‑139 (MQ=255)
                                                                                                            aaCACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACaaa                                                                                                        <  2:745186/47‑1 (MQ=255)
                                                                                                            aaCACGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACaaa                                                                                                        >  1:745186/1‑47 (MQ=255)
                                                                                                             acacGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              >  1:529746/1‑56 (MQ=255)
                                                                                                             acacGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTg                                                                                              <  2:529746/56‑1 (MQ=255)
                                                                                                             acacGGCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACAtt           >  1:1230511/1‑139 (MQ=255)
                                                                                                                 ggCGTTTGCGCGGGCGCCATCGAATGGTGGTCTGCCGACAAAAGCTGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGcc       >  2:998941/1‑139 (MQ=255)
                                                                                                                 ggCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGgcg                                                                                        >  2:1136655/1‑58 (MQ=255)
                                                                                                                 ggCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGgcg                                                                                        <  1:1136655/58‑1 (MQ=255)
                                                                                                                 ggCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCCGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCttt                                                      <  2:12604/92‑1 (MQ=255)
                                                                                                                 ggCGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCCGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCttt                                                      >  1:12604/1‑92 (MQ=255)
                                                                                                                   cGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACta                                                                         <  1:890627/71‑1 (MQ=255)
                                                                                                                   cGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACta                                                                         >  2:890627/1‑71 (MQ=255)
                                                                                                                   cGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt                                                 >  2:280847/1‑95 (MQ=255)
                                                                                                                   cGTTTGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCt                                                 <  1:280847/95‑1 (MQ=255)
                                                                                                                     tttGCGCGGGCACCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCAccc   >  2:275276/1‑139 (MQ=255)
                                                                                                                      ttGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCt  <  2:1355566/139‑1 (MQ=255)
                                                                                                                       tGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAgg                                                                                          >  2:1621163/1‑50 (MQ=255)
                                                                                                                       tGCGCGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAgg                                                                                          <  1:1621163/50‑1 (MQ=255)
                                                                                                                        gcgcGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGc                                                                                             <  2:1543545/46‑1 (MQ=255)
                                                                                                                        gcgcGGGCGCCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGc                                                                                             >  1:1543545/1‑46 (MQ=255)
                                                                                                                                 |                                                                                                                               
CAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCT  >  NC_000913/486512‑486768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A