Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A30 F2 I1 R1
|
19 |
387.3 |
17406066 |
94.9% |
16518356 |
146.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947 |
2,633,849 |
C→T |
H173H (CAC→CAT) |
clpP → |
ATP‑dependent Clp protease proteolytic subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947 | 2,633,849 | 0 | C | T | 99.7%
| 1262.4
/ NA
| 352 | H173H (CAC→CAT) | clpP | ATP‑dependent Clp protease proteolytic subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (177/174); minor base G (0/1); total (177/175) |
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 356 total aligned reads displayed.
CAAGGGCAAGCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCACACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCAGAGCAGGTGGG > NC_002947/2633702‑2633995
|
ggCAAGCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGc > 2:7984538/1‑150 (MQ=255)
cAAGCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCa < 2:4209252/150‑1 (MQ=255)
cAAGCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCa > 2:2446435/1‑150 (MQ=255)
aGCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGGGCTGCTGGCCTATCATACCGGCCAgg > 1:4311666/1‑150 (MQ=255)
gCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGa > 2:3970126/1‑150 (MQ=255)
cGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGAc < 1:7651964/150‑1 (MQ=255)
tCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCt > 1:4419288/1‑150 (MQ=255)
ttGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCga < 1:6553925/150‑1 (MQ=255)
ttGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCga < 1:7718640/150‑1 (MQ=255)
gcctgcctAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCgaga < 2:1149892/150‑1 (MQ=255)
cctgcctAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGAc < 2:5020729/150‑1 (MQ=255)
gcctAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCAt > 2:6886295/1‑150 (MQ=255)
tAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCaa < 2:6231496/150‑1 (MQ=255)
aCTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGc < 1:8504974/150‑1 (MQ=255)
aCTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGc < 2:1383877/150‑1 (MQ=255)
tCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt < 2:8397012/150‑1 (MQ=255)
tCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt < 2:8539296/150‑1 (MQ=255)
tCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt > 1:4923049/1‑150 (MQ=255)
tCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt < 1:7984538/150‑1 (MQ=255)
tCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt < 2:3741367/150‑1 (MQ=255)
tCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt < 1:390427/150‑1 (MQ=255)
gcgcgTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGa > 2:3430333/1‑150 (MQ=255)
gatgatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGa > 2:7519614/1‑150 (MQ=255)
gatgatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGa > 2:5813826/1‑150 (MQ=255)
tgatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGc < 2:729409/150‑1 (MQ=255)
tgatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGc > 1:2201099/1‑150 (MQ=255)
tgatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGc < 2:4539267/150‑1 (MQ=255)
tgatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGc < 1:1985658/150‑1 (MQ=255)
gatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGc < 2:7855592/115‑1 (MQ=255)
gatCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCg > 2:1981241/1‑150 (MQ=255)
tCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTg > 1:7855108/1‑150 (MQ=255)
ccaccaGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGa > 1:2524337/1‑150 (MQ=255)
ccaGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACaa < 1:6111282/150‑1 (MQ=255)
gCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACtt > 2:1645018/1‑150 (MQ=255)
ccGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTc > 1:2462170/1‑150 (MQ=255)
gCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCAt < 1:6724583/150‑1 (MQ=255)
tGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGa < 2:3666673/150‑1 (MQ=255)
cggcTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAgcgc < 1:742606/150‑1 (MQ=255)
ttCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcg > 1:2994559/1‑150 (MQ=255)
ttCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcg > 2:6085829/1‑150 (MQ=255)
ttCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcg > 1:1892729/1‑150 (MQ=255)
ttCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcg > 2:1352193/1‑150 (MQ=255)
ttCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcg > 2:3209141/1‑150 (MQ=255)
ttCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcg > 1:1746148/1‑150 (MQ=255)
tCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTcgc < 1:1298976/150‑1 (MQ=255)
gggTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCgcgcgc < 1:6392425/150‑1 (MQ=255)
gTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAg > 1:5092762/1‑150 (MQ=255)
tCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGc > 2:5374801/1‑150 (MQ=255)
aGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCg < 2:8119300/150‑1 (MQ=255)
aCCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTAc > 1:3795582/1‑150 (MQ=255)
cGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACgg > 1:1532658/1‑150 (MQ=255)
cGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACgg < 2:7632217/150‑1 (MQ=255)
tatCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACaa > 1:7060360/1‑114 (MQ=255)
tatCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCt > 2:5440467/1‑150 (MQ=255)
tatCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCt > 1:5776142/1‑150 (MQ=255)
tatCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCt > 2:1775270/1‑150 (MQ=255)
cGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGAt < 1:2304738/150‑1 (MQ=255)
gagaTCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATc < 2:6697954/150‑1 (MQ=255)
gagaTCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATc > 2:1844195/1‑150 (MQ=255)
aTCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGAc < 2:7410903/150‑1 (MQ=255)
ccACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTc > 2:2791099/1‑150 (MQ=255)
ccAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTa > 1:8636242/1‑150 (MQ=255)
cAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTAc < 1:5374801/150‑1 (MQ=255)
aGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACg > 1:2068387/1‑150 (MQ=255)
aGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACg > 2:7886257/1‑150 (MQ=255)
aGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACg > 1:1008510/1‑150 (MQ=255)
ggAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGa > 2:703364/1‑150 (MQ=255)
ggAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGa > 2:8673149/1‑150 (MQ=255)
ggAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGa < 2:2373397/150‑1 (MQ=255)
tctcAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCg < 1:5553288/150‑1 (MQ=255)
ctcAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCgg > 1:462289/1‑150 (MQ=255)
tcAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt > 2:8212198/1‑71 (MQ=255)
tcAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGt < 1:8212198/71‑1 (MQ=255)
tcAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGc > 2:228231/1‑150 (MQ=255)
tcAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGc > 1:5427760/1‑150 (MQ=255)
aaTATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGt > 1:2831173/1‑81 (MQ=255)
tatCAAGCCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCAACAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACt < 1:3465884/150‑1 (MQ=255)
cAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGc > 2:4378957/1‑150 (MQ=255)
cAAGGCCCGTCTGAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGc < 1:3970126/150‑1 (MQ=255)
gAACGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCgg < 2:3305074/150‑1 (MQ=255)
aaCGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTa < 1:6809682/119‑1 (MQ=255)
aaCGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCggg < 1:276249/150‑1 (MQ=255)
aCGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCgggg < 2:36232/150‑1 (MQ=255)
cGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCggggg < 2:351612/150‑1 (MQ=255)
cGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCggggg > 2:7098311/1‑150 (MQ=255)
cGAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCggggg < 2:6436923/150‑1 (MQ=255)
gAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCgggggg > 1:5901654/1‑150 (MQ=255)
gAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCgggggg > 1:3701749/1‑150 (MQ=255)
gAGCTGCTGGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCgggggg > 1:1057492/1‑150 (MQ=255)
ctgctgGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCa > 1:7166630/1‑150 (MQ=255)
tgctgGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCag < 1:3186150/150‑1 (MQ=255)
gctgGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCaga > 2:2930397/1‑150 (MQ=255)
ctgGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCagag > 2:7354439/1‑150 (MQ=255)
ctgGCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCagag < 1:3474922/150‑1 (MQ=255)
gCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGc < 1:3079575/49‑1 (MQ=255)
gCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGc > 2:3079575/1‑49 (MQ=255)
gCCTATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCAGAGCAg > 1:3292768/1‑150 (MQ=255)
tATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCAGAGCAGGTg > 1:6000466/1‑150 (MQ=255)
tATCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCAGAGCAGGTg > 1:8262747/1‑150 (MQ=255)
aTCATACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCAGAGCAGGTgg < 2:5208447/150‑1 (MQ=255)
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CAAGGGCAAGCGTCATTGCCTGCCTAACTCGCGCGTGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGTCAGGCCACCGATATCGAGATCCACGCCCAGGAAATTCTCAATATCAAGGCCCGTCTGAACGAGCTGCTGGCCTATCACACCGGCCAGGACCTCGAGACCATCAAGCGTGACACCGAGCGTGACAACTTCATGAGCGCCTCGCGCGCAGCCGAGTACGGCCTGATCGACTCGGTCTACGACAAGCGGCAACTGGCCTCCTGAACCGGGGGGTCAGAGCAGGTGGG > NC_002947/2633702‑2633995
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
