Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A36 F92 I1 R1
|
25 |
267.8 |
11967606 |
95.0% |
11369225 |
146.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947 |
2,293,757 |
G→A |
D350N (GAC→AAC) |
pepN → |
aminopeptidase N |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947 | 2,293,757 | 0 | G | A | 100.0%
| 958.6
/ NA
| 266 | D350N (GAC→AAC) | pepN | aminopeptidase N |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (131/135); total (131/135) |
Only 100 of 266 total aligned reads displayed.
GTCGCCCACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAGACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTCCGT > NC_002947/2293610‑2293903
|
gtCGCCCACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAAc > 2:2975529/1‑150 (MQ=255)
gCCCACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTc < 1:1894617/150‑1 (MQ=255)
gCCCACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTc > 2:1351844/1‑150 (MQ=255)
cccACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCg > 1:274703/1‑150 (MQ=255)
ccACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGc > 2:4483600/1‑150 (MQ=255)
ccACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGc > 2:1241989/1‑150 (MQ=255)
ccACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGc > 1:2418454/1‑150 (MQ=255)
gTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCt > 2:4546402/1‑150 (MQ=255)
aCTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgc < 2:3182873/150‑1 (MQ=255)
cTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcg > 2:2817856/1‑150 (MQ=255)
ttCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcgc > 1:5552002/1‑150 (MQ=255)
ttCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcgc > 1:3805205/1‑150 (MQ=255)
ttCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcgc > 1:803974/1‑150 (MQ=255)
ttCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcgc > 2:477903/1‑150 (MQ=255)
ttCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcgc > 2:5711345/1‑150 (MQ=255)
ttCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTgcgc > 1:1596192/1‑150 (MQ=255)
tCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGca > 1:45855/1‑150 (MQ=255)
ccACAAATGGTCGGGCAACCGCGACAACTGCCGAGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCAGCGATGCAGAGTTCAGTGACGACATGAACTCGCGCACGGTCAAGCTCATCGAAAACGTCGCCTACCAGCGcac > 2:5867379/1‑150 (MQ=255)
acaACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGcaccc < 1:1270268/150‑1 (MQ=255)
aaCTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGcacccac < 2:5982966/150‑1 (MQ=255)
ggTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGt < 1:5929451/150‑1 (MQ=255)
gTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGtt < 1:143401/150‑1 (MQ=255)
gggCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGc < 1:2648301/150‑1 (MQ=255)
ggCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGct > 2:2196547/1‑149 (MQ=255)
ggCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGcc < 2:1447261/150‑1 (MQ=255)
gCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCg > 2:2678122/1‑150 (MQ=255)
cAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGa > 2:3956910/1‑150 (MQ=255)
cgcgTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGAc > 1:73251/1‑150 (MQ=255)
cgcgTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGAc < 1:5867918/150‑1 (MQ=255)
tCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCgg < 1:3401825/150‑1 (MQ=255)
aCCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGGTCGCCGAAGACGCGGGc < 2:3309220/150‑1 (MQ=255)
ccTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGcc < 1:3703072/150‑1 (MQ=255)
ccTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGcc > 1:5057086/1‑150 (MQ=255)
cTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTc > 1:5335934/1‑109 (MQ=255)
cTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTc < 2:5335934/109‑1 (MQ=255)
cTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGccc > 1:1005928/1‑150 (MQ=255)
tGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGcccc > 2:4836878/1‑150 (MQ=255)
tGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGc > 2:2551961/1‑150 (MQ=255)
gACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGcc < 2:84597/150‑1 (MQ=255)
gTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCg < 2:2266302/98‑1 (MQ=255)
gTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCg > 1:2266302/1‑98 (MQ=255)
tCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCgg > 2:1951101/1‑150 (MQ=255)
ccAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGt < 2:4625851/150‑1 (MQ=255)
aGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTgc > 1:4745413/1‑150 (MQ=255)
aGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTgc < 1:3988542/150‑1 (MQ=255)
aGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTgc > 2:4833707/1‑150 (MQ=255)
gTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGccc > 1:4099576/1‑150 (MQ=255)
gCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGa > 2:3208956/1‑150 (MQ=255)
gCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGa < 2:5177790/150‑1 (MQ=255)
tGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACa < 1:972129/150‑1 (MQ=255)
gaaggCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTc < 2:2616162/150‑1 (MQ=255)
aggCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCAt < 2:4066141/150‑1 (MQ=255)
ggCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATc < 1:3861060/150‑1 (MQ=255)
ttCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGaa > 2:4730000/1‑150 (MQ=255)
ttCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGaa > 2:1182507/1‑150 (MQ=255)
ttCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGaa > 1:3195301/1‑150 (MQ=255)
cACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGt < 1:3291538/126‑1 (MQ=255)
cGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAAtct < 1:1710933/150‑1 (MQ=255)
tATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCa < 2:4978288/150‑1 (MQ=255)
aTTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCaa < 1:2848956/150‑1 (MQ=255)
ttCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAAc < 2:299228/150‑1 (MQ=255)
tCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACt > 1:1689376/1‑150 (MQ=255)
ccGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATc > 1:1731426/1‑128 (MQ=255)
aGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTc < 2:4207880/150‑1 (MQ=255)
aGTGCCGACATCAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCCGACAGCTACATCGAAATCTCCAACTACTACACACAGACCGTc > 2:5270246/1‑150 (MQ=255)
tGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTa > 2:3799042/1‑150 (MQ=255)
gCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTAc < 2:4085852/150‑1 (MQ=255)
ccGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACg > 1:1228790/1‑150 (MQ=255)
cGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACAccc > 1:5666786/1‑137 (MQ=255)
cGACATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACAccc < 2:5666704/137‑1 (MQ=255)
aCATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACgaga < 1:4483600/150‑1 (MQ=255)
aCATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACgaga < 1:1351814/150‑1 (MQ=255)
cATGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGaa < 2:2460664/150‑1 (MQ=255)
aTGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAg > 2:5122894/1‑150 (MQ=255)
tGAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAgg < 2:3722363/150‑1 (MQ=255)
gAACTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAggg > 1:5285991/1‑150 (MQ=255)
aCTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGgcg > 2:2747672/1‑150 (MQ=255)
cTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGgcgc > 2:747592/1‑150 (MQ=255)
cTCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGgcgc < 1:5357775/150‑1 (MQ=255)
tCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGcc > 2:2008803/1‑150 (MQ=255)
tCGCGCACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGcc > 1:2146239/1‑150 (MQ=255)
gcgcACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGa > 1:5127459/1‑150 (MQ=255)
gcACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAg > 1:5632053/1‑150 (MQ=255)
gaaCGGTCAAGCGCATCGAAAACGTCGACTACCTGCGCACCCACCAGTTCGCCGAAGACGAGGTCCCCATGTAACACACGCTGCGCCCGGACAGCTTCATATAAATCTCCAACTTCTAAAAACTGAACGTCTACGAGAAGTGCGCCGAAg > 2:5510655/3‑150 (MQ=255)
cACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAgt < 2:5736944/150‑1 (MQ=255)
cACGGTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAgt < 1:4836565/150‑1 (MQ=255)
ggTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAgtggt > 1:5955518/1‑150 (MQ=255)
ggTCAAGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAgtggt < 1:5780459/150‑1 (MQ=255)
aGCGCATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCa < 1:2975529/150‑1 (MQ=255)
gcgcATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACg < 2:1807337/125‑1 (MQ=255)
gcgcATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACg > 1:1807337/1‑125 (MQ=255)
gcgcATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCAt < 1:196535/150‑1 (MQ=255)
gcgcATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCACCGAAGTGGTGCGCAt < 1:2817856/150‑1 (MQ=255)
cATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGt < 1:2678122/150‑1 (MQ=255)
cATCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGt > 1:4180001/1‑150 (MQ=255)
tCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTcc < 2:1730963/150‑1 (MQ=255)
tCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTcc > 2:1848279/1‑150 (MQ=255)
tCGAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTcc < 2:3575605/150‑1 (MQ=255)
gAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTCCGt > 2:4788545/1‑150 (MQ=255)
gAAAACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTCCGt > 1:23727/1‑150 (MQ=255)
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GTCGCCCACGAGTACTTCCACAACTGGTCGGGCAACCGCGTCACCTGCCGTGACTGGTTCCAGCTGTCGCTGAAGGAAGGCTTCACGGTATTCCGCGATGCCGAGTTCAGTGCCGACATGAACTCGCGCACGGTCAAGCGCATCGAAGACGTCGCCTACCTGCGCACCCACCAGTTCGCCGAAGACGCGGGCCCCATGGCCCACCCGGTGCGCCCGGACAGCTTCATCGAAATCTCCAACTTCTACACCCTGACCGTCTACGAGAAGGGCGCCGAAGTGGTGCGCATGGTCCGT > NC_002947/2293610‑2293903
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
