Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F30 I1 R1
|
27 |
113.4 |
3878132 |
98.9% |
3835472 |
139.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,347,718 |
C→A |
A343S (GCC→TCC) |
dcuB ← |
anaerobic C4‑dicarboxylate transporter DcuB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,347,718 | 0 | C | A | 100.0%
| 359.3
/ NA
| 104 | A343S (GCC→TCC) | dcuB | anaerobic C4‑dicarboxylate transporter DcuB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (53/51); total (53/51) |
Only 100 of 106 total aligned reads displayed.
ACCGTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGCCCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTT > NC_000913/4347581‑4347853
|
aCCGTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGTCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGacc > 2:350718/1‑140 (MQ=255)
cGTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCAc > 1:1182163/1‑140 (MQ=255)
gTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACg > 2:798186/1‑140 (MQ=255)
tAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACgg > 1:821904/1‑140 (MQ=255)
tAGCAAGCCGGTGCTAAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACgg > 2:1108712/1‑140 (MQ=255)
aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGa < 2:710642/140‑1 (MQ=255)
aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGa < 1:798186/140‑1 (MQ=255)
aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGa > 1:1313254/1‑140 (MQ=255)
aGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGa > 1:710642/1‑140 (MQ=255)
gCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt > 1:121131/1‑140 (MQ=255)
cAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATa < 1:1750301/140‑1 (MQ=255)
cAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATa < 2:1703894/140‑1 (MQ=255)
aGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt > 1:687055/1‑137 (MQ=255)
aGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt < 2:687055/137‑1 (MQ=255)
aGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt < 2:1709756/137‑1 (MQ=255)
aGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt > 1:1709756/1‑137 (MQ=255)
ccGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt < 2:1456498/135‑1 (MQ=255)
ccGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGAt > 1:1456498/1‑135 (MQ=255)
ccGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCACCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATActct > 2:226279/1‑140 (MQ=255)
ggTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCttt < 2:776780/140‑1 (MQ=255)
gTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCTCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGCACCACGGATACTCTTTc > 1:1087685/1‑140 (MQ=255)
tGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCa < 1:642778/140‑1 (MQ=255)
tGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCa < 1:56526/140‑1 (MQ=255)
tGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCa > 2:1424083/1‑140 (MQ=255)
tGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCa < 1:1882006/140‑1 (MQ=255)
tGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCa < 2:1298412/140‑1 (MQ=255)
tGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCa > 1:1705232/1‑140 (MQ=255)
aaGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCAtt < 1:1516489/140‑1 (MQ=255)
aaGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCAtt > 2:1516489/1‑140 (MQ=255)
cACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCAc < 1:1108712/140‑1 (MQ=255)
tGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGt < 2:1102860/140‑1 (MQ=255)
tGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGt < 1:226279/140‑1 (MQ=255)
gTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTa > 1:1286430/1‑140 (MQ=255)
aTGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACg < 2:1325405/140‑1 (MQ=255)
tGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGc > 1:1666495/1‑140 (MQ=255)
gCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGcc < 2:821904/140‑1 (MQ=255)
gCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGcc < 1:1279237/140‑1 (MQ=255)
ccGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGccc < 1:750740/140‑1 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGcc > 2:1733082/1‑135 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGcc < 1:194960/135‑1 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGcc > 2:194960/1‑135 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGcc < 1:1733082/135‑1 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGaa > 1:789167/1‑140 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGaa > 2:291862/1‑140 (MQ=255)
aTCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGaa > 1:446701/1‑140 (MQ=255)
cAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAAtt < 2:755064/140‑1 (MQ=255)
cAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAAtt > 2:1393113/1‑140 (MQ=255)
cAACGCCGATCGCCAGCGCGACCGGAACAATCGACGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAAtt > 2:1518596/1‑140 (MQ=255)
cAACGCCGATCGCCAGCGCGACCGGAACAATCACCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAAtt > 2:167388/1‑140 (MQ=255)
cGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCa < 1:291862/140‑1 (MQ=255)
aTCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACat > 2:928265/1‑140 (MQ=255)
aTCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACat > 2:1345324/1‑140 (MQ=255)
cGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACatat < 2:58150/140‑1 (MQ=255)
aGCGCGACCGGAACAATCGACGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATgcgc < 1:1518596/140‑1 (MQ=255)
gcgcGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCa < 2:121131/140‑1 (MQ=255)
cgcgACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCAc > 2:1539847/1‑140 (MQ=255)
aCCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGaa > 1:65853/1‑140 (MQ=255)
ccGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCa > 2:1042646/1‑134 (MQ=255)
ccGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCa < 1:1042646/134‑1 (MQ=255)
cGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACa < 1:1613291/140‑1 (MQ=255)
aaCAATCACCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATgg < 1:167388/140‑1 (MQ=255)
aCAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGt < 2:789167/140‑1 (MQ=255)
ccgccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGcc < 1:1424083/140‑1 (MQ=255)
gccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGTAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat > 2:792711/1‑140 (MQ=255)
gccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATATGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat > 2:1561348/1‑140 (MQ=255)
gccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat > 1:845408/1‑140 (MQ=255)
gccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat > 1:1246134/1‑140 (MQ=255)
gccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat < 2:65853/140‑1 (MQ=255)
gccAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat > 2:1775520/1‑140 (MQ=255)
gccAGCGCCGCACCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGccat > 2:1219590/1‑140 (MQ=255)
cgtcgcAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATg < 1:350718/137‑1 (MQ=255)
cgccgcAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATg < 2:1168735/140‑1 (MQ=255)
cgccgcAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATg > 2:1916869/1‑140 (MQ=255)
cgccgcAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATg < 1:928265/140‑1 (MQ=255)
cgccgcAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTACCATCCATg > 2:613984/1‑140 (MQ=255)
ccTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCg > 2:519492/1‑140 (MQ=255)
tGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCCCCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTa < 1:548539/140‑1 (MQ=255)
tGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTa > 2:190244/1‑140 (MQ=255)
gagTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTacac > 2:1874244/1‑140 (MQ=255)
gTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTacac < 2:969589/138‑1 (MQ=255)
gTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTacac > 1:969589/1‑138 (MQ=255)
tACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCa < 1:1916869/140‑1 (MQ=255)
tACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCa < 1:1112643/140‑1 (MQ=255)
tACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCa > 1:167726/1‑140 (MQ=255)
cAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACg < 2:1246134/140‑1 (MQ=255)
cAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACg < 2:845408/140‑1 (MQ=255)
accTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCCCCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATCCCGTACACCGCCACGAt < 2:1855653/138‑1 (MQ=255)
aCTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATCCCGTACACCGCCACGATg < 1:1345324/140‑1 (MQ=255)
aCTTGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATg < 1:519492/140‑1 (MQ=255)
cTTGGAAACCAGCAGTAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATgg < 1:792711/140‑1 (MQ=255)
ttGGAAACCAGCAGCAGAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACGCCGCCACGATGGc < 2:1313254/140‑1 (MQ=255)
cagcagcagAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATAc < 2:446701/140‑1 (MQ=255)
gcagcagAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACcg > 1:1536044/1‑140 (MQ=255)
gcagcagAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACcg > 1:1377499/1‑140 (MQ=255)
cagAACAATGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACcggaac > 1:1893112/1‑140 (MQ=255)
aTGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATAc > 1:835625/1‑127 (MQ=255)
aTGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATAc < 2:835625/127‑1 (MQ=255)
tGGCATAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACt > 2:1441076/1‑140 (MQ=255)
tAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGtt > 1:1418675/1‑140 (MQ=255)
tAGGACCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGtt > 2:1591339/1‑140 (MQ=255)
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ACCGTAGCAAGCCGGTGCTGAAGCCACGATGTATGCCGGATCAACGCCGATCGCCAGCGCGACCGGAACAATCGCCGCCAGCGCCGCAGCCTGAGAGTTTACAAACTTGGAAACCAGCAGCAGAACAATGGCATAGGCCCACGGATACTCTTTCACCATTTCACCCAGTACGCCCTGAATTTCAGACATATGCGCACCGAACATGGTTTCTGCCATCCATGCGATACCGTACACCGCCACGATGGCGATCATACCGGAACGGAAGACTTCGTT > NC_000913/4347581‑4347853
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
