Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F30 I1 R1
|
21 |
82.8 |
2811760 |
99.1% |
2786454 |
138.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,570,380 |
C→A |
G399* (GGA→TGA) |
yjiR ← |
fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,570,380 | 0 | C | A | 100.0%
| 293.6
/ NA
| 82 | G399* (GGA→TGA) | yjiR | fused putative DNA‑binding transcriptional regulator/putative aminotransferase YjiR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (38/44); total (38/44) |
CAGACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCCGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAA > NC_000913/4570249‑4570511
|
cAGACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCg > 2:1374640/1‑140 (MQ=255)
aGACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCgg < 2:1026912/140‑1 (MQ=255)
aGACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCgg < 1:245262/140‑1 (MQ=255)
aGACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCgg < 2:798446/140‑1 (MQ=255)
gACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCggg > 1:929036/1‑140 (MQ=255)
gACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCggg > 2:681111/1‑140 (MQ=255)
aCAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgc < 1:216142/140‑1 (MQ=255)
cAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcg < 1:1355161/140‑1 (MQ=255)
aaTTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcgc < 1:563745/140‑1 (MQ=255)
aaTTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcgc < 2:1384248/140‑1 (MQ=255)
tACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCgg > 2:809476/1‑133 (MQ=255)
tACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCgg < 1:809476/133‑1 (MQ=255)
ggTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATa > 1:316080/1‑140 (MQ=255)
tATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACa > 2:1085923/1‑140 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcgc < 1:203397/130‑1 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcgc > 2:203397/1‑130 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcg < 2:581836/129‑1 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgcg > 1:581836/1‑129 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgc > 1:1153261/1‑128 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGgc < 2:1153261/128‑1 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGcgcg < 1:1404128/131‑1 (MQ=255)
tttGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGcgcg > 2:1404128/1‑131 (MQ=255)
tGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGAtt > 1:1380774/1‑140 (MQ=255)
tGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGAtt > 2:626578/1‑140 (MQ=255)
tGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGAtt > 2:62718/1‑140 (MQ=255)
gCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGAttt > 2:825914/1‑140 (MQ=255)
gCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGAttt > 1:733898/1‑140 (MQ=255)
cGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCg < 2:929036/140‑1 (MQ=255)
aaGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCg > 1:1335011/1‑137 (MQ=255)
aaGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCg < 2:1335011/137‑1 (MQ=255)
aaGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAg > 1:971805/1‑140 (MQ=255)
aGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAgg < 2:980203/140‑1 (MQ=255)
aGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAgg < 2:248713/140‑1 (MQ=255)
aGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAgg < 2:533038/140‑1 (MQ=255)
aaaaTCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAata < 1:799951/140‑1 (MQ=255)
aaaaTCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAata < 1:681111/140‑1 (MQ=255)
cGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTccc < 1:62718/140‑1 (MQ=255)
cGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTccc < 2:316080/140‑1 (MQ=255)
gCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTa < 2:733898/140‑1 (MQ=255)
gCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTa < 1:1374640/140‑1 (MQ=255)
gCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTa > 2:1185951/1‑140 (MQ=255)
gCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTa > 1:446907/1‑140 (MQ=255)
ccTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTAt < 1:626578/140‑1 (MQ=255)
tGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATcc < 1:1085923/140‑1 (MQ=255)
tGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATcc < 2:971805/140‑1 (MQ=255)
tGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATcc < 1:202153/140‑1 (MQ=255)
ccgccACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCcag < 1:897451/140‑1 (MQ=255)
ccgccACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCcag > 2:298335/1‑140 (MQ=255)
ccgccACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCcag < 2:174500/140‑1 (MQ=255)
gccACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCcagca < 1:298335/140‑1 (MQ=255)
cACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAgg < 2:446907/140‑1 (MQ=255)
aTGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCaa > 2:402263/1‑140 (MQ=255)
tGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCaaa < 2:1380774/140‑1 (MQ=255)
gCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTgc < 1:402263/140‑1 (MQ=255)
ccGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTgcg > 2:881404/1‑132 (MQ=255)
ccGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTgcg < 1:881404/132‑1 (MQ=255)
cgcgACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTgcg > 2:168215/1‑129 (MQ=255)
cgcgACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTgcg < 1:168215/129‑1 (MQ=255)
cGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGc < 2:434364/140‑1 (MQ=255)
aCCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATccg > 1:1192500/1‑140 (MQ=255)
aCCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATccg > 1:888041/1‑140 (MQ=255)
atatCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCa > 1:1363564/1‑133 (MQ=255)
atatCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCa < 2:1363564/133‑1 (MQ=255)
atCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATccg < 1:1034359/135‑1 (MQ=255)
atCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATccg > 2:1034359/1‑135 (MQ=255)
atCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGa > 2:1151841/1‑140 (MQ=255)
atCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGa > 1:163450/1‑140 (MQ=255)
tCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGat < 2:1225528/140‑1 (MQ=255)
tCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGat < 2:632785/140‑1 (MQ=255)
tCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGat < 1:825914/140‑1 (MQ=255)
tCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGat < 2:163450/140‑1 (MQ=255)
gACCTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGatat < 1:1185951/140‑1 (MQ=255)
ccTGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATgg > 2:1255189/1‑140 (MQ=255)
tGTTCAGGCAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCg > 2:261892/1‑140 (MQ=255)
cAATTCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGt < 1:1151841/140‑1 (MQ=255)
ttCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGAc > 2:740615/1‑140 (MQ=255)
tCTATCCACAGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGAcc > 2:1297798/1‑140 (MQ=255)
aGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGcac > 1:552879/1‑140 (MQ=255)
aGTAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGcac > 2:31300/1‑140 (MQ=255)
tAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACaa > 1:272556/1‑140 (MQ=255)
tAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACaa > 2:680420/1‑140 (MQ=255)
tAAAAATCAGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACaa > 1:890838/1‑140 (MQ=255)
|
CAGACAATTACGGTATTTGCCGGAAGCTGAGAAAATCGAGCCTGCCGCCACCTGGATTTTCATGCGGCACAGCTGCCGCGCGACGCAGACCATATCGACCTGTTCAGGCAATTCTATCCACAGTAAAAATCCGCCTTTCGGGCGCGTAATACAGATTTCGCAGGGAAAATATTCCCGTATCCAGCAGGTATAAAGCGCCAAATTGCGCTGATAGATCTGCCGCATCCGCCGGATATGGCGATGATAGTGACCTTCCAGCACAA > NC_000913/4570249‑4570511
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
