Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F28 I1 R1	169	80.7	2736954	99.0%	2709584	138.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,609,962	C→T	Y183Y (TAC→TAT)	prfC →	peptide chain release factor RF3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,609,962	0	C	T	100.0%	240.6 / NA	68	Y183Y (TAC→TAT)	prfC	peptide chain release factor RF3
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (26/42); total (26/42)

CTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGT  >  NC_000913/4609825‑4610097

cTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTatca                                                                                                                                       <  1:895587/140‑1 (MQ=255)

cTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTatca                                                                                                                                       >  2:960394/1‑140 (MQ=255)

cTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTatca                                                                                                                                       >  2:166787/1‑140 (MQ=255)

   aCCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCt                                                                                                                                    >  1:83757/1‑140 (MQ=255)

   aCCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCt                                                                                                                                    >  1:796853/1‑140 (MQ=255)

        tATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTtata                                                                                                                               >  1:899261/1‑140 (MQ=255)

        tATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTtata                                                                                                                               <  1:309943/140‑1 (MQ=255)

        tATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTtata                                                                                                                               <  1:298433/140‑1 (MQ=255)

          tGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATaaa                                                                                                                             >  2:1053798/1‑140 (MQ=255)

             aCAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGAc                                                                                                                          <  1:756864/140‑1 (MQ=255)

             aCAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGAc                                                                                                                          <  1:166787/140‑1 (MQ=255)

              cAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACg                                                                                                                         <  1:391567/140‑1 (MQ=255)

              cAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACg                                                                                                                         <  1:352989/140‑1 (MQ=255)

                  cTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAAc                                                                                                                     <  1:726444/140‑1 (MQ=255)

                  cTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAAc                                                                                                                     <  2:475358/140‑1 (MQ=255)

                  cTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAAc                                                                                                                     >  1:475358/1‑140 (MQ=255)

                           gATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTa                                                                                                            >  2:1279981/1‑140 (MQ=255)

                           gATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTa                                                                                                            >  2:1332151/1‑140 (MQ=255)

                            atatCCGCGACACGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTAt                                                                                                           >  2:574979/1‑140 (MQ=255)

                                ccGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCaga                                                                                                       >  1:1357354/1‑140 (MQ=255)

                                 cgcgGCCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCTCCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      <  2:646095/140‑1 (MQ=255)

                                 cgcgACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      <  1:1026508/140‑1 (MQ=255)

                                 cgcgACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      <  2:901554/140‑1 (MQ=255)

                                 cgcgACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      <  2:83757/140‑1 (MQ=255)

                                 cgcgACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      >  2:405670/1‑140 (MQ=255)

                                     acacGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGt                                                                                                  <  1:574979/137‑1 (MQ=255)

                                     aCCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGt                                                                                                  <  2:899261/140‑1 (MQ=255)

                                      cccGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTa                                                                                                 >  2:76163/1‑140 (MQ=255)

                                      cccGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTa                                                                                                 <  1:1053798/140‑1 (MQ=255)

                                          aTGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAgg                                                                                             <  1:1332151/140‑1 (MQ=255)

                                              aGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      >  2:371556/1‑127 (MQ=255)

                                              aGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCagag                                                                                                      <  1:371556/127‑1 (MQ=255)

                                              aGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCcac                                                                                         <  1:106287/140‑1 (MQ=255)

                                              aGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCcac                                                                                         <  1:635157/140‑1 (MQ=255)

                                                  gctCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTGTCAGAGCGGTAAAGGCCACACCa                                                                                     <  2:489709/140‑1 (MQ=255)

                                                     cGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCacac                                                                                       >  2:765995/1‑135 (MQ=255)

                                                     cGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCacac                                                                                       <  1:765995/135‑1 (MQ=255)

                                                        tGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCca                                                                                          >  1:91539/1‑129 (MQ=255)

                                                        tGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCca                                                                                          <  2:91539/129‑1 (MQ=255)

                                                        tGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAgg                                                                               <  2:1124260/140‑1 (MQ=255)

                                                        tGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAgg                                                                               >  1:1285638/1‑140 (MQ=255)

                                                            gTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGt                                                                           <  2:266986/140‑1 (MQ=255)

                                                               gagaACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCg                                                                        <  1:76163/140‑1 (MQ=255)

                                                               gagaACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCg                                                                        <  2:1357354/140‑1 (MQ=255)

                                                               gagaACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCg                                                                        <  1:1262185/140‑1 (MQ=255)

                                                                agaACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGc                                                                       >  2:609754/1‑140 (MQ=255)

                                                                agaACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGc                                                                       <  1:1064315/140‑1 (MQ=255)

                                                                  aaCGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCAt                                                                     <  2:1285638/140‑1 (MQ=255)

                                                                  aaCGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCAt                                                                     >  1:1161521/1‑140 (MQ=255)

                                                                       gCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTa                                                                >  1:458332/1‑140 (MQ=255)

                                                                            aaaTCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAggg                                                           <  2:796853/140‑1 (MQ=255)

                                                                                 ggCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTa                                                                >  1:1347031/1‑130 (MQ=255)

                                                                                 ggCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTa                                                                <  2:1347031/130‑1 (MQ=255)

                                                                                      tgCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAAcc                                                 <  2:577925/140‑1 (MQ=255)

                                                                                                aCCTGTCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGa                                       <  2:1209037/140‑1 (MQ=255)

                                                                                                aCCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGAtct                                          >  1:518216/1‑137 (MQ=255)

                                                                                                aCCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGAtct                                          <  2:518216/137‑1 (MQ=255)

                                                                                                aCCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGa                                       >  1:235299/1‑140 (MQ=255)

                                                                                                aCCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGa                                       <  2:1161521/140‑1 (MQ=255)

                                                                                                      ccGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGAtgctgc                                 <  1:960394/140‑1 (MQ=255)

                                                                                                        gATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCgg                               <  2:89857/140‑1 (MQ=255)

                                                                                                         aTTGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGt                              <  1:405670/140‑1 (MQ=255)

                                                                                                          ttGGCTGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGtt                             >  1:207673/1‑140 (MQ=255)

                                                                                                               tGCGGCAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGa                        <  2:207673/140‑1 (MQ=255)

                                                                                                                    cAAGCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATc                   <  1:1073685/140‑1 (MQ=255)

                                                                                                                       gCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTgg                <  2:458332/140‑1 (MQ=255)

                                                                                                                       gCTGTTTAAAGGCGTTTATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTgg                <  1:1279981/140‑1 (MQ=255)

                                                                                                                                     tttATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGt  >  1:334704/1‑140 (MQ=255)

                                                                                                                                     tttATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGt  >  1:626532/1‑140 (MQ=255)

                                                                                                                                     tttATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGt  >  2:155556/1‑140 (MQ=255)

                                                                                                                                     tttATCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGt  >  1:111254/1‑140 (MQ=255)

CTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGT  >  NC_000913/4609825‑4610097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A