Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A15 F73 I1 R1 29 140.0 4785556 99.3% 4752057 139.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,935,539 C→A G84G (GGC→GGA)  rbsC → ribose ABC transporter membrane subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,935,5390CA100.0% 188.8 / NA 55G84G (GGC→GGA) rbsCribose ABC transporter membrane subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (33/22);  total (33/22)

CTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCGCT  >  NC_000913/3935404‑3935674
                                                                                                                                       |                                                                                                                                       
cTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAg                                                                                                                                     <  2:1644682/140‑1 (MQ=255)
  ttttCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGtt                                                                                                                                   <  1:2224455/140‑1 (MQ=255)
    ttCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGGTCCTGACGTCGGGGGTCGTCTTTTCGGGAGGGTTTCTGTTGGCGCTGATCGGAGCAGtttg                                                                                                                                 >  2:2349870/1‑138 (MQ=255)
    ttCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTtgc                                                                                                                                 <  1:999623/140‑1 (MQ=255)
    ttCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTtgc                                                                                                                                 <  2:1610668/140‑1 (MQ=255)
      cACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTtgctg                                                                                                                               <  2:1160939/140‑1 (MQ=255)
         cATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCAt                                                                                                                            <  2:529673/140‑1 (MQ=255)
         cATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGGTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCAt                                                                                                                            >  1:1017614/1‑140 (MQ=255)
             aaTAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGGAGGGTTTCTGTTGGCGCTGACCGGAGCAGTTGCCGCATCTAt                                                                                                                        >  2:1799190/1‑140 (MQ=255)
                     aTTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGTCGCTGGGGATCCCGACGTCGGGCATCGACATATCGGTAGGGTCTCTGTTGGCGCTGACCGGAGCAGTTGCCGCCTCTATCGTCCGCa                                                                                                                >  2:68724/1‑140 (MQ=255)
                     aTTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCa                                                                                                                >  1:1363623/1‑140 (MQ=255)
                     aTTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGGAGGGTCTCTGTTGGCGCTGACCGGGGCAGTTGCTGCATCTATCGTCGGcc                                                                                                                >  2:2150315/1‑139 (MQ=255)
                      ttCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGGAGGGTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCAt                                                                                                               >  2:744510/1‑140 (MQ=255)
                       tCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCAtt                                                                                                              >  1:167573/1‑140 (MQ=255)
                         aaTATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGa                                                                                                            <  2:811121/140‑1 (MQ=255)
                          atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGaa                                                                                                           <  2:1071643/140‑1 (MQ=255)
                               ctcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCaa                                                                                                      <  2:744176/140‑1 (MQ=255)
                                tcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAAt                                                                                                     >  1:1214991/1‑140 (MQ=255)
                                tcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGGGATCCTGACGTCGGGCATCGACTTATCGGTAGGGTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAAt                                                                                                     >  2:994710/1‑140 (MQ=255)
                                tcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGGGAATCTCACGTCGGGCATTGACTTTTCGGGAGGGTCTCTTTTTGCGCTGACCGGTGCAGTTGCTGCATCTCTCGTCGGCATTTAAGTCCAt                                                                                                     >  2:1668165/1‑140 (MQ=255)
                                   aGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATgcg                                                                                                  <  1:1553696/140‑1 (MQ=255)
                                         ccTCAGTGAACGCCATTATGGCGGTCGGGGTGACGCTGGGGATCCTGACGTCCGGCATCGACTTATCGGTAGGGTCTCTGTTGGCGCTGACCGGAGCAGGTGCTGCATCTATCGTCGGCATTGAAGTCAATTCGCtgggg                                                                                            >  2:549678/1‑138 (MQ=255)
                                          cTCAGTGAACGCCATTATGGCGGTCGGGGTGACGCTGGGGATCCTGACGTCGGGCAACGACTTATTGGGAGGTTTTTTGTTGGGGCTGGCCGGCGCAGTTGCTGCATCTATCGGCGGCATTGAAGTCAATGCGCtggtgg                                                                                           >  2:1777364/1‑140 (MQ=255)
                                             aGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCTGCATTGAAGTCAATGCGCTGGTGGCTg                                                                                        >  1:1159025/1‑140 (MQ=255)
                                             aGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTg                                                                                        >  1:1558291/1‑140 (MQ=255)
                                                    gCCATTATGGCGGTCGGGGTGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGGAGGGTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCgctgc                                                                                 >  2:2227028/1‑140 (MQ=255)
                                                    gCCATTATGGCGGTCGGGGTGACGCTGGGGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGGTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCgctgc                                                                                 >  1:377573/1‑140 (MQ=255)
                                                      cATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGGTCCCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCgctgctg                                                                               >  2:12743/1‑140 (MQ=255)
                                                       aTTATGGCGGTCGGGGTGACGCTGGTGATCCTGACGTCGGGCCTCGACTTATCGGGAGGGTCTCTGTTGGCGCTGACCCGAGCAGGTGCTGCATCTATCGTCGGCATTTAAGTCAAAGCGCTGGTGGCTGTCgctgctgc                                                                              >  2:2384661/1‑140 (MQ=255)
                                                              cGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTcgcg                                                                       >  1:1899389/1‑140 (MQ=255)
                                                                gTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGGCCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGtt                                                                     >  2:1381753/1‑140 (MQ=255)
                                                                gTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGtt                                                                     >  1:1512616/1‑140 (MQ=255)
                                                                   gggATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAgg                                                                  <  2:941492/140‑1 (MQ=255)
                                                                       tGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGcc                                                              >  2:1515713/1‑140 (MQ=255)
                                                                          cGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCa                                                           <  2:1363623/140‑1 (MQ=255)
                                                                          cGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCa                                                           >  1:814385/1‑140 (MQ=255)
                                                                           gCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCaa                                                          <  2:674929/140‑1 (MQ=255)
                                                                                  aTCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGc                                                   <  2:21090/140‑1 (MQ=255)
                                                                                  aTCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGc                                                   <  1:1668165/140‑1 (MQ=255)
                                                                                   tCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCg                                                  >  1:349875/1‑140 (MQ=255)
                                                                                   tCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCg                                                  >  1:16107/1‑140 (MQ=255)
                                                                                    ccTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCgg                                                 >  1:2070572/1‑140 (MQ=255)
                                                                                    ccTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCgg                                                 >  1:2247666/1‑140 (MQ=255)
                                                                                       gACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTaa                                              <  2:1118525/140‑1 (MQ=255)
                                                                                        aCGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAAc                                             <  2:349875/140‑1 (MQ=255)
                                                                                            cGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCggg                                         <  2:167573/140‑1 (MQ=255)
                                                                                             gggCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCgggg                                        >  2:1624077/1‑140 (MQ=255)
                                                                                             gggCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCgggg                                        >  2:1123862/1‑140 (MQ=255)
                                                                                             gggCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCgggg                                        >  2:2011154/1‑140 (MQ=255)
                                                                                              ggCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGt                                       >  1:821344/1‑140 (MQ=255)
                                                                                              ggCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGt                                       >  2:357006/1‑140 (MQ=255)
                                                                                                  tCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGAtt                                   >  2:2241049/1‑140 (MQ=255)
                                                                                                         aTCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGa                            >  1:707953/1‑140 (MQ=255)
                                                                                                          tCGGTAGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGaa                           <  2:16107/140‑1 (MQ=255)
                                                                                                               aGGTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTc                      >  2:1073262/1‑140 (MQ=255)
                                                                                                                ggTTCTCTGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTcg                     >  1:257636/1‑140 (MQ=255)
                                                                                                                    ctctGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTc                 <  1:1022651/140‑1 (MQ=255)
                                                                                                                    ctctGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTc                 >  1:1594725/1‑140 (MQ=255)
                                                                                                                     tctGTTGGCGCTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTcc                >  1:2301414/1‑140 (MQ=255)
                                                                                                                            gcgcTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGtt         >  2:2131212/1‑140 (MQ=255)
                                                                                                                            gcgcTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGtt         >  1:1031023/1‑140 (MQ=255)
                                                                                                                            gcgcTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGtt         >  2:1493041/1‑140 (MQ=255)
                                                                                                                            gcgcTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGtt         >  2:2130479/1‑140 (MQ=255)
                                                                                                                             cgcTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGttt        <  1:2349870/140‑1 (MQ=255)
                                                                                                                               cTGACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTAt      >  1:883069/1‑140 (MQ=255)
                                                                                                                                 gACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCg    >  1:1726564/1‑140 (MQ=255)
                                                                                                                                 gACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCg    >  1:2029259/1‑140 (MQ=255)
                                                                                                                                 gACCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTAAATGCGCTGGTGGCTGTCGCGGCTGCTCTCGCGTTAGGTGTCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCg    <  2:592061/140‑1 (MQ=255)
                                                                                                                                  aCCGGAGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCGc   >  2:1529833/1‑140 (MQ=255)
                                                                                                                                   ccGGAGCAGTTGCTGCATCTATCGTCTGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCGCt  <  2:1159025/140‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                       
CTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCGCT  >  NC_000913/3935404‑3935674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A