Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F73 I1 R1	23	85.6	2911730	99.3%	2891347	139.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,022,708	G→T	G465W (GGG→TGG)	xdhD →	fused putative xanthine/hypoxanthine oxidase: molybdopterin‑binding subunit and Fe‑S binding subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,022,708	0	G	T	100.0%	235.9 / NA	68	G465W (GGG→TGG)	xdhD	fused putative xanthine/hypoxanthine oxidase: molybdopterin‑binding subunit and Fe‑S binding subunit
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (29/39); total (29/39)

CCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCCG  >  NC_000913/3022575‑3022841

ccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTc                                                                                                                                 <  1:1452479/140‑1 (MQ=255)

ccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTc                                                                                                                                 <  2:1453340/140‑1 (MQ=255)

   ccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCgg                                                                                                                              <  1:899991/140‑1 (MQ=255)

     aGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTa                                                                                                                            <  2:685435/140‑1 (MQ=255)

     aGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTa                                                                                                                            <  1:927415/140‑1 (MQ=255)

         cgcgcgCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGt                                                                                                                        <  2:1331585/140‑1 (MQ=255)

         cgcgcgCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGt                                                                                                                        <  2:1220085/140‑1 (MQ=255)

           cgcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGTGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTc                                                                                                                      >  2:628166/1‑140 (MQ=255)

           cgcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGAAATCCTGCTGGAAGAAGGGTGCGCCTGGGCAACCTGCGTGACCTGGCCTCCGGGACTGTTc                                                                                                                      >  2:371701/1‑140 (MQ=255)

             cgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCg                                                                                                                    <  2:859794/140‑1 (MQ=255)

                 tCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTac                                                                                                                <  2:457284/140‑1 (MQ=255)

                  cGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTaca                                                                                                               >  2:802261/1‑140 (MQ=255)

                   gTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGTGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTacac                                                                                                              <  1:628166/140‑1 (MQ=255)

                   gTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTacac                                                                                                              <  2:329121/140‑1 (MQ=255)

                   gTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTacac                                                                                                              <  1:410935/140‑1 (MQ=255)

                          tGAAACAGCATAAAGTTCATGTCATTAAAGAGCGGGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTgaa                                                                                                       >  2:139804/1‑140 (MQ=255)

                          tGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTgaa                                                                                                       <  2:335589/140‑1 (MQ=255)

                          tGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTgaa                                                                                                       >  1:674707/1‑140 (MQ=255)

                            aaaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTgaaga                                                                                                     <  1:371701/140‑1 (MQ=255)

                                  cATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACTACCTGCTGGAAGAAGTGTGCGCCTCGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAagaggt                                                                                               >  2:1193793/1‑138 (MQ=255)

                                   aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGttt                                                                                              <  1:500988/140‑1 (MQ=255)

                                   aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGttt                                                                                              <  1:377099/140‑1 (MQ=255)

                                    tAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTa                                                                                             <  2:189266/140‑1 (MQ=255)

                                       aGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTg                                                                                          >  1:556987/1‑140 (MQ=255)

                                       aGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTg                                                                                          >  1:375465/1‑140 (MQ=255)

                                         ttCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCt                                                                                        >  1:784279/1‑140 (MQ=255)

                                           cATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTaa                                                                                      <  2:950503/140‑1 (MQ=255)

                                            aTGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAac                                                                                     >  2:160960/1‑140 (MQ=255)

                                            aTGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAac                                                                                     >  1:1103181/1‑140 (MQ=255)

                                            aTGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAac                                                                                     >  2:1089745/1‑140 (MQ=255)

                                             tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAaca                                                                                    <  2:1435865/140‑1 (MQ=255)

                                              gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAacac                                                                                   >  2:663660/1‑140 (MQ=255)

                                                       gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCa                                                                          <  2:1137242/140‑1 (MQ=255)

                                                        agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCAc                                                                         >  1:579321/1‑140 (MQ=255)

                                                         gCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACg                                                                        <  1:735333/140‑1 (MQ=255)

                                                          cGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGGAGGGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGt                                                                       >  2:1012755/1‑140 (MQ=255)

                                                          cGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGt                                                                       >  2:51308/1‑140 (MQ=255)

                                                          cGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGt                                                                       >  2:199757/1‑140 (MQ=255)

                                                          cGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGt                                                                       >  2:1262123/1‑140 (MQ=255)

                                                           gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTc                                                                      >  2:415002/1‑140 (MQ=255)

                                                               tGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGa                                                                  <  1:199757/140‑1 (MQ=255)

                                                                   ggcggTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGt                                                              <  2:579321/140‑1 (MQ=255)

                                                                   ggcggTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGt                                                              >  1:650545/1‑140 (MQ=255)

                                                                       gTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCAcc                                                          <  1:905834/140‑1 (MQ=255)

                                                                       gTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCAcc                                                          <  2:674707/140‑1 (MQ=255)

                                                                                  aaaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTggg                                               >  2:263488/1‑140 (MQ=255)

                                                                                   aaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTAGACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGa                                              <  1:465081/140‑1 (MQ=255)

                                                                                   aaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGa                                              <  2:1103181/140‑1 (MQ=255)

                                                                                   aaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGa                                              <  2:375465/140‑1 (MQ=255)

                                                                                   aaCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGa                                              <  2:79337/140‑1 (MQ=255)

                                                                                    aCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAg                                             <  1:503587/140‑1 (MQ=255)

                                                                                    aCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAg                                             <  2:650545/140‑1 (MQ=255)

                                                                                    aCAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAg                                             <  1:263488/140‑1 (MQ=255)

                                                                                        gACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGaa                                         >  2:392051/1‑140 (MQ=255)

                                                                                          cATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGaaaa                                       <  1:802261/140‑1 (MQ=255)

                                                                                             ccTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAg                                    >  1:574452/1‑140 (MQ=255)

                                                                                                         agTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGa                        <  1:1012755/140‑1 (MQ=255)

                                                                                                         agTGTGCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGa                        >  1:325460/1‑140 (MQ=255)

                                                                                                             tgCGCCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGc                    >  2:1354538/1‑140 (MQ=255)

                                                                                                                gcCTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGt                 <  2:1101675/140‑1 (MQ=255)

                                                                                                                  cTGGGCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGa               <  1:1262123/140‑1 (MQ=255)

                                                                                                                     ggCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGa            >  1:448339/1‑140 (MQ=255)

                                                                                                                     ggCAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGa            >  2:8802/1‑140 (MQ=255)

                                                                                                                       cAACCTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATg          >  2:293014/1‑140 (MQ=255)

                                                                                                                          ccTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGTGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGAt       >  1:821432/1‑140 (MQ=255)

                                                                                                                          ccTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGAt       >  1:571368/1‑140 (MQ=255)

                                                                                                                           cTGCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGAtt      >  2:1067723/1‑140 (MQ=255)

                                                                                                                             gCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTc    <  1:474433/140‑1 (MQ=255)

                                                                                                                             gCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTc    <  1:21048/140‑1 (MQ=255)

                                                                                                                             gCGTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTc    <  1:1361438/140‑1 (MQ=255)

                                                                                                                               gTGACCTGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCcg  >  2:172771/1‑140 (MQ=255)

CCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCCG  >  NC_000913/3022575‑3022841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A