Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F73 I1 R1
|
28 |
130.3 |
4467684 |
99.3% |
4436410 |
139.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,147,848 |
G→T |
intergenic (‑108/‑49) |
yqhI ← / → gpr |
protein YqhI/L‑glyceraldehyde 3‑phosphate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,147,848 | 0 | G | T | 100.0%
| 432.6
/ NA
| 120 | intergenic (‑108/‑49) | yqhI/gpr | protein YqhI/L‑glyceraldehyde 3‑phosphate reductase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (58/62); total (58/62) |
Only 100 of 121 total aligned reads displayed.
GGAAATCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCGCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCGC > NC_000913/3147713‑3147984
|
ggAAATCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTaa < 2:2208664/140‑1 (MQ=255)
ggAAATCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTaa < 2:307911/140‑1 (MQ=255)
aaaTCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAAc < 2:111487/140‑1 (MQ=255)
aaTCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACt > 1:354769/1‑140 (MQ=255)
tCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTaa < 1:2018357/135‑1 (MQ=255)
tCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTaa > 2:2018357/1‑135 (MQ=255)
tCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAg > 2:1826586/1‑140 (MQ=255)
ttGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGaaa > 1:1413467/1‑140 (MQ=255)
ttGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGaaa < 1:107474/140‑1 (MQ=255)
tAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGttt < 2:2220941/140‑1 (MQ=255)
tAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGttt > 2:1102033/1‑140 (MQ=255)
gcgGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGAGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGaaa < 2:1642335/140‑1 (MQ=255)
gCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTg < 2:1341076/140‑1 (MQ=255)
cATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGa > 2:490847/1‑140 (MQ=255)
cATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGa > 1:75624/1‑140 (MQ=255)
aTCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa < 2:354769/140‑1 (MQ=255)
aTCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa < 1:184090/140‑1 (MQ=255)
aTCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa < 2:1734989/140‑1 (MQ=255)
tCGTTGCACTCCTCAGTT‑GTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACg < 1:449936/140‑1 (MQ=255)
cGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACg < 1:1102033/140‑1 (MQ=255)
cGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACg < 1:1919710/140‑1 (MQ=255)
ttGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGt < 2:232430/140‑1 (MQ=255)
cACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGa < 2:770571/140‑1 (MQ=255)
ctcAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa < 2:1202963/128‑1 (MQ=255)
ctcAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa > 1:1202963/1‑128 (MQ=255)
ctcAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGga > 1:1927365/1‑140 (MQ=255)
ctcAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGga < 2:783307/140‑1 (MQ=255)
tcAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGgag < 1:103786/140‑1 (MQ=255)
cAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa > 2:1003889/1‑126 (MQ=255)
cAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGaa < 1:1003889/126‑1 (MQ=255)
tGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTc < 1:916739/140‑1 (MQ=255)
tGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTc < 2:1413467/140‑1 (MQ=255)
gtgtTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCAt > 2:264578/1‑140 (MQ=255)
gtgtTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCAt > 1:1267098/1‑140 (MQ=255)
gtgtTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCAt > 1:388003/1‑140 (MQ=255)
gtgtTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCAt > 1:1228023/1‑140 (MQ=255)
gtTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATgg < 2:1298268/140‑1 (MQ=255)
gtTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATgg > 2:718983/1‑140 (MQ=255)
tttttttAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCGAGACTACGGGATACGCGCTGGTGAATCTCTAAACTAGAAACAATGTTTCGAAATTGGACGGTGGAAAGGAGAGGTCATGGt < 1:1345903/140‑1 (MQ=255)
tttttAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCt > 1:230781/1‑140 (MQ=255)
tttAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTgg > 1:511775/1‑140 (MQ=255)
tttAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTgg > 2:706133/1‑140 (MQ=255)
tttAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTgg > 2:692752/1‑140 (MQ=255)
tttAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTgg > 2:2125611/1‑140 (MQ=255)
agcaTAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAAt > 2:1071194/1‑140 (MQ=255)
agcaTAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAAt > 2:1193038/1‑140 (MQ=255)
agcaTAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAAt > 1:770040/1‑140 (MQ=255)
tAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGGGGTCATGGTCTGGTTAGCGAATCCCg > 2:152632/1‑140 (MQ=255)
cGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGtt > 2:1524590/1‑140 (MQ=255)
cGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGtt > 1:447765/1‑140 (MQ=255)
gTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTa < 1:490847/140‑1 (MQ=255)
tATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATATGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTAc > 2:1521882/1‑140 (MQ=255)
tATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTAc > 1:243512/1‑140 (MQ=255)
aTTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACg < 2:75624/140‑1 (MQ=255)
tttttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACgg < 2:1145886/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 2:388003/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 2:230781/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 2:619066/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 1:1026207/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 2:1049378/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 1:103351/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 1:1071194/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 1:1193038/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 1:1621822/140‑1 (MQ=255)
tttGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGc < 2:1267098/140‑1 (MQ=255)
tGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAg > 2:1379532/1‑140 (MQ=255)
gCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGa < 2:291478/140‑1 (MQ=255)
gCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGa < 1:1431740/140‑1 (MQ=255)
gCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGa > 1:1476468/1‑140 (MQ=255)
cccAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGAt > 1:1369766/1‑140 (MQ=255)
ccAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACgg > 2:1558576/1‑133 (MQ=255)
ccAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACgg < 1:1558576/133‑1 (MQ=255)
cAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGc < 2:2067191/140‑1 (MQ=255)
tttttCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAAt > 1:2070983/1‑140 (MQ=255)
tttttCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAAt > 1:323855/1‑140 (MQ=255)
cGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCaa > 2:2060154/1‑134 (MQ=255)
cGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCaa < 1:2060154/134‑1 (MQ=255)
ctctGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTg > 2:2131072/1‑140 (MQ=255)
tctGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGc < 2:62546/140‑1 (MQ=255)
ctGTGAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCg > 1:1309793/1‑140 (MQ=255)
tgtgAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCgg > 1:746481/1‑140 (MQ=255)
gtgAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGa < 1:2170927/140‑1 (MQ=255)
gAGCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGaaa < 1:1379532/140‑1 (MQ=255)
gCCAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGaaaaa > 2:415603/1‑140 (MQ=255)
ccAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAg < 2:1927365/140‑1 (MQ=255)
ccAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAg < 2:447765/140‑1 (MQ=255)
ccAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAg < 1:692752/140‑1 (MQ=255)
ccAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAg < 1:1308440/140‑1 (MQ=255)
ccAGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAg < 1:1524590/140‑1 (MQ=255)
aGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTg > 2:850967/1‑140 (MQ=255)
aGACTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACACTGTTTCGAAATTGAACGTTGGAAAGGAGAGGTCATGGGCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTg > 2:1031510/1‑140 (MQ=255)
aCTACGGGATACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGt > 1:1383225/1‑140 (MQ=255)
aTACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCt < 1:2131072/140‑1 (MQ=255)
tACGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTg > 1:691671/1‑140 (MQ=255)
aCGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGTGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGc > 1:1032265/1‑140 (MQ=255)
aCGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGc > 2:1350469/1‑140 (MQ=255)
aCGCGCTGGCGAATCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGc > 1:184581/1‑140 (MQ=255)
aaTCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCg < 2:691671/140‑1 (MQ=255)
aTCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCGc > 1:1822912/1‑140 (MQ=255)
aTCTCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCGc < 2:830668/140‑1 (MQ=255)
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GGAAATCTTTGGCGGTTAAACGCGGCATCGTTGCACTCCTCAGTTGGTGTTTTTTTAAGCAAAGCATAAGCACGTATTTTTGCCCAGTTTTTCGTCACTCTGTGAGCCAGACTACGGGATACGCGCTGGCGAATCGCTAAACTAGAAACATTGTTTCGAAATTGAACGGTGGAAAGGAGAGGTCATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCGC > NC_000913/3147713‑3147984
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
